EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000005421 (Gene tree)
Gene ID: 102309531
Gene Symbol: -
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 4909 bases
Position: chrJH427725.1:4351-9259
Accession: 102309531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000024181	Exo_endo_phos	PF03372.23	9.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000009209	-	719	XM_005952994	ENSHBUP00000024181	239 (aa)	XP_005953056	-

Gene Model

Click here to download ENSHBUG00000005421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000005421's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000005421	-	87	81.159	ENSHBUG00000002714	tdp2b	57	81.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000005421	-	83	57.711	ENSG00000111802	TDP2	66	56.436	Homo_sapiens
ENSHBUG00000005421	-	82	66.162	ENSAPOG00000018379	-	70	66.162	Acanthochromis_polyacanthus
ENSHBUG00000005421	-	87	58.373	ENSAMEG00000010230	TDP2	74	58.654	Ailuropoda_melanoleuca
ENSHBUG00000005421	-	78	59.043	ENSAOCG00000010081	-	79	59.043	Amphiprion_ocellaris
ENSHBUG00000005421	-	82	63.452	ENSAPEG00000004208	-	69	63.452	Amphiprion_percula
ENSHBUG00000005421	-	96	58.009	ENSATEG00000010663	-	71	60.000	Anabas_testudineus
ENSHBUG00000005421	-	98	51.477	ENSACAG00000002332	TDP2	58	53.953	Anolis_carolinensis
ENSHBUG00000005421	-	88	56.132	ENSANAG00000020033	TDP2	59	56.132	Aotus_nancymaae
ENSHBUG00000005421	-	100	75.732	ENSACLG00000016132	tdp2b	72	81.690	Astatotilapia_calliptera
ENSHBUG00000005421	-	100	74.895	ENSACLG00000016174	tdp2b	72	80.751	Astatotilapia_calliptera
ENSHBUG00000005421	-	87	97.596	ENSACLG00000016148	tdp2b	74	97.596	Astatotilapia_calliptera
ENSHBUG00000005421	-	92	46.606	ENSAMXG00000036549	tdp2a	70	46.606	Astyanax_mexicanus
ENSHBUG00000005421	-	87	65.258	ENSAMXG00000011775	tdp2b	56	65.258	Astyanax_mexicanus
ENSHBUG00000005421	-	79	59.686	ENSBTAG00000000365	TDP2	52	59.686	Bos_taurus
ENSHBUG00000005421	-	80	31.500	WBGene00013405	tdpt-1	59	31.390	Caenorhabditis_elegans
ENSHBUG00000005421	-	79	60.209	ENSCJAG00000021963	-	53	60.209	Callithrix_jacchus
ENSHBUG00000005421	-	87	56.190	ENSCJAG00000006074	TDP2	69	56.190	Callithrix_jacchus
ENSHBUG00000005421	-	87	58.373	ENSCAFG00000010428	TDP2	71	58.654	Canis_familiaris
ENSHBUG00000005421	-	87	58.373	ENSCAFG00020009994	TDP2	71	58.654	Canis_lupus_dingo
ENSHBUG00000005421	-	87	56.459	ENSCHIG00000015294	-	71	56.459	Capra_hircus
ENSHBUG00000005421	-	99	51.250	ENSTSYG00000037199	TDP2	67	55.769	Carlito_syrichta
ENSHBUG00000005421	-	86	57.212	ENSCPOG00000006390	TDP2	58	57.212	Cavia_porcellus
ENSHBUG00000005421	-	99	53.138	ENSCCAG00000022734	TDP2	69	55.238	Cebus_capucinus
ENSHBUG00000005421	-	84	56.436	ENSCATG00000022076	TDP2	66	56.436	Cercocebus_atys
ENSHBUG00000005421	-	86	56.731	ENSCLAG00000002072	TDP2	58	56.731	Chinchilla_lanigera
ENSHBUG00000005421	-	84	56.436	ENSCSAG00000007769	TDP2	56	56.436	Chlorocebus_sabaeus
ENSHBUG00000005421	-	97	51.709	ENSCPBG00000006551	TDP2	50	57.360	Chrysemys_picta_bellii
ENSHBUG00000005421	-	84	56.436	ENSCANG00000040122	TDP2	67	56.436	Colobus_angolensis_palliatus
ENSHBUG00000005421	-	79	57.592	ENSCGRG00001000384	Tdp2	54	55.779	Cricetulus_griseus_chok1gshd
ENSHBUG00000005421	-	79	57.592	ENSCGRG00000010250	Tdp2	57	55.779	Cricetulus_griseus_crigri
ENSHBUG00000005421	-	88	71.564	ENSCVAG00000003114	tdp2b	57	71.564	Cyprinodon_variegatus
ENSHBUG00000005421	-	82	68.182	ENSDARG00000035954	tdp2b	52	68.182	Danio_rerio
ENSHBUG00000005421	-	86	56.522	ENSDNOG00000044082	TDP2	56	56.522	Dasypus_novemcinctus
ENSHBUG00000005421	-	83	58.706	ENSETEG00000019096	TDP2	72	58.706	Echinops_telfairi
ENSHBUG00000005421	-	91	45.205	ENSEBUG00000006535	tdp2a	51	45.205	Eptatretus_burgeri
ENSHBUG00000005421	-	99	50.628	ENSEASG00005007656	TDP2	56	57.143	Equus_asinus_asinus
ENSHBUG00000005421	-	99	50.628	ENSECAG00000014264	TDP2	57	56.250	Equus_caballus
ENSHBUG00000005421	-	98	50.847	ENSEEUG00000010776	TDP2	55	57.360	Erinaceus_europaeus
ENSHBUG00000005421	-	100	59.167	ENSELUG00000016449	tdp2b	54	66.346	Esox_lucius
ENSHBUG00000005421	-	90	46.047	ENSELUG00000009321	tdp2a	66	46.047	Esox_lucius
ENSHBUG00000005421	-	86	58.654	ENSFCAG00000025612	TDP2	57	58.654	Felis_catus
ENSHBUG00000005421	-	92	52.727	ENSFALG00000004710	TDP2	59	52.727	Ficedula_albicollis
ENSHBUG00000005421	-	88	56.604	ENSFDAG00000006512	TDP2	73	56.604	Fukomys_damarensis
ENSHBUG00000005421	-	82	59.694	ENSFHEG00000013560	-	67	59.694	Fundulus_heteroclitus
ENSHBUG00000005421	-	82	56.345	ENSGALG00000013637	TDP2	53	56.345	Gallus_gallus
ENSHBUG00000005421	-	99	52.301	ENSGAGG00000002853	TDP2	51	58.376	Gopherus_agassizii
ENSHBUG00000005421	-	79	59.686	ENSGGOG00000014237	TDP2	63	59.686	Gorilla_gorilla
ENSHBUG00000005421	-	99	52.521	ENSHGLG00000008655	TDP2	56	58.794	Heterocephalus_glaber_female
ENSHBUG00000005421	-	82	58.794	ENSHGLG00100019087	TDP2	56	58.794	Heterocephalus_glaber_male
ENSHBUG00000005421	-	84	64.532	ENSIPUG00000013691	tdp2b	56	63.333	Ictalurus_punctatus
ENSHBUG00000005421	-	79	56.021	ENSJJAG00000021685	Tdp2	55	56.021	Jaculus_jaculus
ENSHBUG00000005421	-	84	62.871	ENSKMAG00000015485	-	65	62.871	Kryptolebias_marmoratus
ENSHBUG00000005421	-	82	54.315	ENSLACG00000008852	TDP2	54	54.315	Latimeria_chalumnae
ENSHBUG00000005421	-	100	52.500	ENSLOCG00000005817	tdp2b	76	57.346	Lepisosteus_oculatus
ENSHBUG00000005421	-	86	58.252	ENSLAFG00000002567	TDP2	58	58.252	Loxodonta_africana
ENSHBUG00000005421	-	84	56.436	ENSMFAG00000045296	TDP2	66	56.436	Macaca_fascicularis
ENSHBUG00000005421	-	84	56.436	ENSMMUG00000009803	TDP2	56	56.436	Macaca_mulatta
ENSHBUG00000005421	-	84	56.436	ENSMNEG00000038003	TDP2	66	56.436	Macaca_nemestrina
ENSHBUG00000005421	-	84	56.436	ENSMLEG00000028883	TDP2	66	56.436	Mandrillus_leucophaeus
ENSHBUG00000005421	-	98	66.667	ENSMAMG00000013654	tdp2b	57	73.301	Mastacembelus_armatus
ENSHBUG00000005421	-	94	77.232	ENSMZEG00005004126	tdp2b	72	82.775	Maylandia_zebra
ENSHBUG00000005421	-	87	80.676	ENSMZEG00005003950	tdp2b	57	80.676	Maylandia_zebra
ENSHBUG00000005421	-	100	76.151	ENSMZEG00005003980	-	69	82.160	Maylandia_zebra
ENSHBUG00000005421	-	100	94.979	ENSMZEG00005004077	tdp2b	75	96.364	Maylandia_zebra
ENSHBUG00000005421	-	87	75.962	ENSMZEG00005004103	tdp2b	69	75.962	Maylandia_zebra
ENSHBUG00000005421	-	97	83.190	ENSMZEG00005004153	tdp2b	74	89.100	Maylandia_zebra
ENSHBUG00000005421	-	85	81.773	ENSMZEG00005004055	tdp2b	67	81.773	Maylandia_zebra
ENSHBUG00000005421	-	98	50.424	ENSMGAG00000008014	TDP2	53	56.853	Meleagris_gallopavo
ENSHBUG00000005421	-	79	57.592	ENSMAUG00000014451	Tdp2	52	57.592	Mesocricetus_auratus
ENSHBUG00000005421	-	87	56.938	ENSMICG00000000039	TDP2	71	56.938	Microcebus_murinus
ENSHBUG00000005421	-	79	59.686	ENSMOCG00000002823	Tdp2	52	59.686	Microtus_ochrogaster
ENSHBUG00000005421	-	82	58.883	ENSMODG00000011653	TDP2	60	58.883	Monodelphis_domestica
ENSHBUG00000005421	-	80	64.062	ENSMALG00000005368	-	64	64.062	Monopterus_albus
ENSHBUG00000005421	-	79	60.209	MGP_CAROLIEiJ_G0018354	Tdp2	53	58.673	Mus_caroli
ENSHBUG00000005421	-	88	55.924	ENSMUSG00000035958	Tdp2	55	55.924	Mus_musculus
ENSHBUG00000005421	-	79	57.592	MGP_PahariEiJ_G0019417	Tdp2	55	53.810	Mus_pahari
ENSHBUG00000005421	-	88	55.924	MGP_SPRETEiJ_G0019220	Tdp2	55	55.924	Mus_spretus
ENSHBUG00000005421	-	86	59.135	ENSMPUG00000004516	TDP2	58	59.135	Mustela_putorius_furo
ENSHBUG00000005421	-	87	53.810	ENSMLUG00000013506	TDP2	58	53.810	Myotis_lucifugus
ENSHBUG00000005421	-	79	56.021	ENSNGAG00000001375	Tdp2	52	56.021	Nannospalax_galili
ENSHBUG00000005421	-	79	59.686	ENSNLEG00000002447	TDP2	61	59.686	Nomascus_leucogenys
ENSHBUG00000005421	-	100	52.823	ENSOPRG00000016299	TDP2	60	56.731	Ochotona_princeps
ENSHBUG00000005421	-	84	58.128	ENSODEG00000014018	TDP2	69	58.128	Octodon_degus
ENSHBUG00000005421	-	91	53.211	ENSOCUG00000013773	TDP2	60	53.211	Oryctolagus_cuniculus
ENSHBUG00000005421	-	89	58.879	ENSORLG00000001661	-	78	58.879	Oryzias_latipes
ENSHBUG00000005421	-	89	58.879	ENSORLG00020004634	-	78	58.879	Oryzias_latipes_hni
ENSHBUG00000005421	-	89	47.907	ENSORLG00015008190	-	76	47.907	Oryzias_latipes_hsok
ENSHBUG00000005421	-	84	60.199	ENSOMEG00000015899	-	74	60.513	Oryzias_melastigma
ENSHBUG00000005421	-	90	55.349	ENSOGAG00000025303	TDP2	58	55.349	Otolemur_garnettii
ENSHBUG00000005421	-	83	57.711	ENSPPAG00000029023	TDP2	67	56.436	Pan_paniscus
ENSHBUG00000005421	-	86	57.212	ENSPPRG00000015398	TDP2	57	57.212	Panthera_pardus
ENSHBUG00000005421	-	86	57.212	ENSPTIG00000018574	TDP2	71	57.212	Panthera_tigris_altaica
ENSHBUG00000005421	-	83	57.711	ENSPTRG00000017778	TDP2	66	57.426	Pan_troglodytes
ENSHBUG00000005421	-	84	56.931	ENSPANG00000017590	TDP2	66	56.931	Papio_anubis
ENSHBUG00000005421	-	96	59.671	ENSPKIG00000006483	tdp2b	58	65.116	Paramormyrops_kingsleyae
ENSHBUG00000005421	-	82	58.883	ENSPSIG00000004948	TDP2	72	56.132	Pelodiscus_sinensis
ENSHBUG00000005421	-	79	59.162	ENSPEMG00000001788	Tdp2	52	59.162	Peromyscus_maniculatus_bairdii
ENSHBUG00000005421	-	82	45.500	ENSPMAG00000001570	tdp2b	73	45.500	Petromyzon_marinus
ENSHBUG00000005421	-	82	57.868	ENSPCIG00000007316	TDP2	52	57.868	Phascolarctos_cinereus
ENSHBUG00000005421	-	87	55.714	ENSPFOG00000017990	-	76	55.714	Poecilia_formosa
ENSHBUG00000005421	-	86	56.796	ENSPLAG00000019439	-	65	56.796	Poecilia_latipinna
ENSHBUG00000005421	-	88	55.189	ENSPMEG00000010824	-	71	55.189	Poecilia_mexicana
ENSHBUG00000005421	-	83	57.214	ENSPCOG00000021415	TDP2	71	57.214	Propithecus_coquereli
ENSHBUG00000005421	-	87	85.990	ENSPNYG00000011532	tdp2b	57	85.990	Pundamilia_nyererei
ENSHBUG00000005421	-	100	77.647	ENSPNYG00000011504	tdp2b	75	80.786	Pundamilia_nyererei
ENSHBUG00000005421	-	76	76.374	ENSPNYG00000001944	-	73	76.705	Pundamilia_nyererei
ENSHBUG00000005421	-	96	50.000	ENSRNOG00000018246	Tdp2	52	58.115	Rattus_norvegicus
ENSHBUG00000005421	-	84	56.436	ENSRBIG00000037119	TDP2	67	56.436	Rhinopithecus_bieti
ENSHBUG00000005421	-	84	56.931	ENSRROG00000005025	TDP2	67	56.931	Rhinopithecus_roxellana
ENSHBUG00000005421	-	87	54.762	ENSSBOG00000028734	TDP2	69	54.762	Saimiri_boliviensis_boliviensis
ENSHBUG00000005421	-	82	59.391	ENSSHAG00000002506	TDP2	53	59.391	Sarcophilus_harrisii
ENSHBUG00000005421	-	99	54.000	ENSSFOG00015011322	-	54	57.812	Scleropages_formosus
ENSHBUG00000005421	-	88	55.660	ENSSARG00000013547	TDP2	76	55.660	Sorex_araneus
ENSHBUG00000005421	-	92	52.036	ENSSPUG00000008288	TDP2	60	52.036	Sphenodon_punctatus
ENSHBUG00000005421	-	84	58.128	ENSSSCG00000001092	TDP2	56	58.128	Sus_scrofa
ENSHBUG00000005421	-	83	53.266	ENSTGUG00000009035	TDP2	76	53.266	Taeniopygia_guttata
ENSHBUG00000005421	-	87	56.604	ENSTRUG00000012218	-	74	56.604	Takifugu_rubripes
ENSHBUG00000005421	-	86	72.330	ENSTRUG00000014347	tdp2b	57	72.330	Takifugu_rubripes
ENSHBUG00000005421	-	84	61.576	ENSTNIG00000010260	TDP2	77	61.576	Tetraodon_nigroviridis
ENSHBUG00000005421	-	86	71.845	ENSTNIG00000017792	tdp2b	57	71.845	Tetraodon_nigroviridis
ENSHBUG00000005421	-	83	59.701	ENSTTRG00000016376	TDP2	57	58.654	Tursiops_truncatus
ENSHBUG00000005421	-	86	58.654	ENSUAMG00000025939	TDP2	60	58.654	Ursus_americanus
ENSHBUG00000005421	-	87	58.373	ENSUMAG00000020111	TDP2	69	58.654	Ursus_maritimus
ENSHBUG00000005421	-	88	56.604	ENSXETG00000014826	tdp2	56	56.604	Xenopus_tropicalis
ENSHBUG00000005421	-	80	58.031	ENSXCOG00000010778	-	54	58.031	Xiphophorus_couchianus
ENSHBUG00000005421	-	80	58.549	ENSXMAG00000022252	-	56	58.549	Xiphophorus_maculatus