EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000005447 (Gene tree)
Gene ID: 102303826
Gene Symbol: -
Alias: -
Full Name: transcription activator BRG1-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 15690 bases
Position: chrJH425786.1:145895-161584
Accession: 102303826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000004056	ResIII	PF04851.15	1.7e-08	1	1
ENSHBUP00000004080	ResIII	PF04851.15	1.9e-08	1	1
ENSHBUP00000004056	BRK	PF07533.16	8.9e-16	1	1
ENSHBUP00000004080	BRK	PF07533.16	9.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000009299	-	5015	XM_005945740	ENSHBUP00000004080	1657 (aa)	XP_005945802	UPI0003BCA7B7
ENSHBUT00000009334	-	4545	-	ENSHBUP00000004056	1514 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000005447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000005447's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000005447	-	98	73.467	ENSHBUG00000006691	SMARCA2	91	73.093
ENSHBUG00000005447	-	98	85.724	ENSHBUG00000021172	smarca4a	100	85.397

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000005447	-	99	83.144	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSHBUG00000005447	-	97	96.363	ENSAPOG00000004542	SMARCA4	99	96.557	Acanthochromis_polyacanthus
ENSHBUG00000005447	-	78	88.543	ENSAPOG00000003509	smarca4a	98	87.229	Acanthochromis_polyacanthus
ENSHBUG00000005447	-	97	86.225	ENSAMEG00000010868	SMARCA4	100	80.208	Ailuropoda_melanoleuca
ENSHBUG00000005447	-	100	97.490	ENSACIG00000003035	-	99	97.490	Amphilophus_citrinellus
ENSHBUG00000005447	-	98	84.581	ENSACIG00000021550	smarca4a	98	85.906	Amphilophus_citrinellus
ENSHBUG00000005447	-	92	86.638	ENSAOCG00000019167	smarca4a	100	87.055	Amphiprion_ocellaris
ENSHBUG00000005447	-	96	93.974	ENSAOCG00000009450	-	97	93.841	Amphiprion_ocellaris
ENSHBUG00000005447	-	100	96.310	ENSAPEG00000023108	-	100	96.310	Amphiprion_percula
ENSHBUG00000005447	-	92	86.709	ENSAPEG00000015559	smarca4a	100	87.127	Amphiprion_percula
ENSHBUG00000005447	-	99	95.876	ENSATEG00000001094	-	98	95.876	Anabas_testudineus
ENSHBUG00000005447	-	99	85.109	ENSATEG00000011524	smarca4a	100	85.517	Anabas_testudineus
ENSHBUG00000005447	-	97	86.439	ENSANAG00000036991	SMARCA4	100	80.964	Aotus_nancymaae
ENSHBUG00000005447	-	100	98.943	ENSACLG00000008638	-	100	98.943	Astatotilapia_calliptera
ENSHBUG00000005447	-	98	85.658	ENSACLG00000000163	smarca4a	96	85.786	Astatotilapia_calliptera
ENSHBUG00000005447	-	98	86.676	ENSAMXG00000021023	smarca4a	96	86.465	Astyanax_mexicanus
ENSHBUG00000005447	-	96	87.705	ENSAMXG00000011238	-	96	89.318	Astyanax_mexicanus
ENSHBUG00000005447	-	99	83.453	ENSBTAG00000019220	SMARCA4	100	84.024	Bos_taurus
ENSHBUG00000005447	-	97	86.660	ENSCJAG00000005936	SMARCA4	100	80.403	Callithrix_jacchus
ENSHBUG00000005447	-	99	83.264	ENSCAFG00000017584	SMARCA4	100	84.072	Canis_familiaris
ENSHBUG00000005447	-	98	84.513	ENSCAFG00020024620	SMARCA4	99	84.072	Canis_lupus_dingo
ENSHBUG00000005447	-	99	79.880	ENSCHIG00000015318	SMARCA4	100	80.564	Capra_hircus
ENSHBUG00000005447	-	98	84.821	ENSTSYG00000012966	SMARCA4	100	84.204	Carlito_syrichta
ENSHBUG00000005447	-	96	82.947	ENSCAPG00000015932	SMARCA4	94	89.688	Cavia_aperea
ENSHBUG00000005447	-	99	83.656	ENSCPOG00000015549	SMARCA4	100	84.132	Cavia_porcellus
ENSHBUG00000005447	-	98	82.317	ENSCCAG00000031660	SMARCA4	99	81.228	Cebus_capucinus
ENSHBUG00000005447	-	97	86.416	ENSCATG00000029530	SMARCA4	100	83.952	Cercocebus_atys
ENSHBUG00000005447	-	98	85.462	ENSCLAG00000011946	SMARCA4	100	84.324	Chinchilla_lanigera
ENSHBUG00000005447	-	99	83.583	ENSCPBG00000009994	SMARCA4	100	84.062	Chrysemys_picta_bellii
ENSHBUG00000005447	-	97	87.529	ENSCANG00000036013	SMARCA4	100	83.952	Colobus_angolensis_palliatus
ENSHBUG00000005447	-	99	83.084	ENSCGRG00001016732	Smarca4	100	83.832	Cricetulus_griseus_chok1gshd
ENSHBUG00000005447	-	97	88.086	ENSCGRG00000017242	Smarca4	100	83.832	Cricetulus_griseus_crigri
ENSHBUG00000005447	-	96	81.729	ENSCSEG00000014771	smarca4a	100	84.578	Cynoglossus_semilaevis
ENSHBUG00000005447	-	96	92.109	ENSCVAG00000003018	-	98	88.963	Cyprinodon_variegatus
ENSHBUG00000005447	-	99	83.455	ENSCVAG00000006979	smarca4a	99	84.742	Cyprinodon_variegatus
ENSHBUG00000005447	-	97	87.037	ENSDARG00000077226	smarca4a	100	86.033	Danio_rerio
ENSHBUG00000005447	-	97	84.176	ENSDARG00000104339	SMARCA4	95	84.329	Danio_rerio
ENSHBUG00000005447	-	96	83.156	ENSDNOG00000048847	SMARCA4	90	90.466	Dasypus_novemcinctus
ENSHBUG00000005447	-	86	79.106	ENSDORG00000002544	Smarca4	91	79.504	Dipodomys_ordii
ENSHBUG00000005447	-	95	76.307	ENSETEG00000013361	SMARCA4	94	73.012	Echinops_telfairi
ENSHBUG00000005447	-	96	87.406	ENSEASG00005006167	SMARCA4	100	82.111	Equus_asinus_asinus
ENSHBUG00000005447	-	99	83.475	ENSECAG00000008334	SMARCA4	100	83.892	Equus_caballus
ENSHBUG00000005447	-	98	86.676	ENSELUG00000010247	smarca4a	100	82.399	Esox_lucius
ENSHBUG00000005447	-	98	83.011	ENSELUG00000023232	-	98	85.311	Esox_lucius
ENSHBUG00000005447	-	99	83.234	ENSFCAG00000004894	SMARCA4	100	83.981	Felis_catus
ENSHBUG00000005447	-	92	80.759	ENSFALG00000004208	SMARCA4	95	82.134	Ficedula_albicollis
ENSHBUG00000005447	-	92	83.930	ENSFDAG00000012237	SMARCA4	97	84.550	Fukomys_damarensis
ENSHBUG00000005447	-	100	95.147	ENSFHEG00000007902	-	100	94.967	Fundulus_heteroclitus
ENSHBUG00000005447	-	98	83.291	ENSFHEG00000010182	smarca4a	100	84.157	Fundulus_heteroclitus
ENSHBUG00000005447	-	87	83.401	ENSGMOG00000002649	smarca4a	93	81.250	Gadus_morhua
ENSHBUG00000005447	-	93	84.378	ENSGMOG00000005756	-	90	83.763	Gadus_morhua
ENSHBUG00000005447	-	74	81.619	ENSGALG00000047145	SMARCA4	100	83.235	Gallus_gallus
ENSHBUG00000005447	-	98	90.569	ENSGAFG00000008827	-	98	86.325	Gambusia_affinis
ENSHBUG00000005447	-	87	87.939	ENSGAFG00000014900	smarca4a	97	88.061	Gambusia_affinis
ENSHBUG00000005447	-	99	86.241	ENSGACG00000016033	-	100	85.422	Gasterosteus_aculeatus
ENSHBUG00000005447	-	94	83.367	ENSGACG00000006691	smarca4a	100	83.073	Gasterosteus_aculeatus
ENSHBUG00000005447	-	99	83.794	ENSGAGG00000016757	SMARCA4	100	84.274	Gopherus_agassizii
ENSHBUG00000005447	-	97	88.144	ENSGGOG00000009882	SMARCA4	100	83.952	Gorilla_gorilla
ENSHBUG00000005447	-	99	83.214	ENSHGLG00000010519	SMARCA4	100	83.721	Heterocephalus_glaber_female
ENSHBUG00000005447	-	99	83.463	ENSHGLG00100013774	SMARCA4	100	83.792	Heterocephalus_glaber_male
ENSHBUG00000005447	-	99	84.231	ENSHCOG00000009510	smarca4a	96	85.515	Hippocampus_comes
ENSHBUG00000005447	-	98	85.040	ENSIPUG00000016346	-	89	90.657	Ictalurus_punctatus
ENSHBUG00000005447	-	99	85.531	ENSIPUG00000006107	smarca4a	100	85.482	Ictalurus_punctatus
ENSHBUG00000005447	-	99	83.204	ENSSTOG00000007939	SMARCA4	100	83.952	Ictidomys_tridecemlineatus
ENSHBUG00000005447	-	99	81.477	ENSJJAG00000012877	Smarca4	100	81.914	Jaculus_jaculus
ENSHBUG00000005447	-	98	85.329	ENSKMAG00000011931	smarca4a	100	84.726	Kryptolebias_marmoratus
ENSHBUG00000005447	-	100	94.731	ENSKMAG00000019518	-	100	94.192	Kryptolebias_marmoratus
ENSHBUG00000005447	-	100	83.558	ENSLBEG00000017383	smarca4a	97	83.191	Labrus_bergylta
ENSHBUG00000005447	-	97	84.386	ENSLBEG00000020655	-	94	85.147	Labrus_bergylta
ENSHBUG00000005447	-	53	77.010	ENSLACG00000015309	SMARCA4	100	77.123	Latimeria_chalumnae
ENSHBUG00000005447	-	98	83.496	ENSLOCG00000007820	smarca4a	99	81.130	Lepisosteus_oculatus
ENSHBUG00000005447	-	99	84.909	ENSLAFG00000001433	SMARCA4	100	83.921	Loxodonta_africana
ENSHBUG00000005447	-	97	87.461	ENSMFAG00000032146	SMARCA4	99	83.952	Macaca_fascicularis
ENSHBUG00000005447	-	99	83.354	ENSMMUG00000012042	SMARCA4	99	89.965	Macaca_mulatta
ENSHBUG00000005447	-	97	86.416	ENSMNEG00000028512	SMARCA4	100	84.053	Macaca_nemestrina
ENSHBUG00000005447	-	97	86.416	ENSMLEG00000034976	SMARCA4	100	83.742	Mandrillus_leucophaeus
ENSHBUG00000005447	-	100	95.931	ENSMAMG00000002841	-	100	95.931	Mastacembelus_armatus
ENSHBUG00000005447	-	96	87.585	ENSMAMG00000009256	smarca4a	98	90.056	Mastacembelus_armatus
ENSHBUG00000005447	-	98	85.724	ENSMZEG00005003889	smarca4a	100	85.225	Maylandia_zebra
ENSHBUG00000005447	-	97	99.875	ENSMZEG00005023861	-	99	99.875	Maylandia_zebra
ENSHBUG00000005447	-	99	83.055	ENSMAUG00000020731	Smarca4	100	83.802	Mesocricetus_auratus
ENSHBUG00000005447	-	97	85.725	ENSMICG00000009806	SMARCA4	100	83.921	Microcebus_murinus
ENSHBUG00000005447	-	99	82.876	ENSMOCG00000022209	Smarca4	100	83.622	Microtus_ochrogaster
ENSHBUG00000005447	-	98	92.578	ENSMMOG00000008466	-	94	92.375	Mola_mola
ENSHBUG00000005447	-	99	82.427	ENSMMOG00000007571	smarca4a	98	84.294	Mola_mola
ENSHBUG00000005447	-	99	82.176	ENSMODG00000006287	SMARCA4	100	82.118	Monodelphis_domestica
ENSHBUG00000005447	-	94	85.220	ENSMALG00000003388	smarca4a	100	85.207	Monopterus_albus
ENSHBUG00000005447	-	92	94.600	ENSMALG00000021534	-	99	95.320	Monopterus_albus
ENSHBUG00000005447	-	99	82.965	MGP_CAROLIEiJ_G0031879	Smarca4	100	85.669	Mus_caroli
ENSHBUG00000005447	-	99	82.965	ENSMUSG00000032187	Smarca4	99	85.669	Mus_musculus
ENSHBUG00000005447	-	99	83.153	MGP_PahariEiJ_G0014745	Smarca4	100	85.692	Mus_pahari
ENSHBUG00000005447	-	99	82.965	MGP_SPRETEiJ_G0033003	Smarca4	100	85.669	Mus_spretus
ENSHBUG00000005447	-	99	83.264	ENSMPUG00000005711	SMARCA4	100	84.012	Mustela_putorius_furo
ENSHBUG00000005447	-	99	83.264	ENSMLUG00000004491	-	100	84.072	Myotis_lucifugus
ENSHBUG00000005447	-	99	83.553	ENSNGAG00000021852	Smarca4	100	83.733	Nannospalax_galili
ENSHBUG00000005447	-	98	86.649	ENSNBRG00000011457	smarca4a	96	87.433	Neolamprologus_brichardi
ENSHBUG00000005447	-	92	99.856	ENSNBRG00000018865	-	99	99.856	Neolamprologus_brichardi
ENSHBUG00000005447	-	97	86.043	ENSNLEG00000012389	SMARCA4	94	81.159	Nomascus_leucogenys
ENSHBUG00000005447	-	81	89.655	ENSOPRG00000000885	-	77	89.655	Ochotona_princeps
ENSHBUG00000005447	-	98	85.714	ENSODEG00000017127	SMARCA4	100	81.764	Octodon_degus
ENSHBUG00000005447	-	99	99.698	ENSONIG00000018040	-	100	99.698	Oreochromis_niloticus
ENSHBUG00000005447	-	98	86.135	ENSONIG00000008196	smarca4a	100	85.276	Oreochromis_niloticus
ENSHBUG00000005447	-	98	80.117	ENSOCUG00000001787	SMARCA4	98	78.466	Oryctolagus_cuniculus
ENSHBUG00000005447	-	96	82.731	ENSORLG00000015452	smarca4a	100	84.384	Oryzias_latipes
ENSHBUG00000005447	-	97	94.960	ENSORLG00000003955	-	100	94.765	Oryzias_latipes
ENSHBUG00000005447	-	97	94.963	ENSORLG00020009728	-	100	94.768	Oryzias_latipes_hni
ENSHBUG00000005447	-	96	82.606	ENSORLG00020004611	smarca4a	100	84.384	Oryzias_latipes_hni
ENSHBUG00000005447	-	100	94.224	ENSORLG00015007739	-	100	94.404	Oryzias_latipes_hsok
ENSHBUG00000005447	-	96	83.416	ENSORLG00015016560	smarca4a	100	84.264	Oryzias_latipes_hsok
ENSHBUG00000005447	-	97	95.081	ENSOMEG00000016626	-	100	95.003	Oryzias_melastigma
ENSHBUG00000005447	-	99	84.217	ENSOMEG00000007486	smarca4a	100	84.657	Oryzias_melastigma
ENSHBUG00000005447	-	91	84.495	ENSOGAG00000016148	SMARCA4	95	89.072	Otolemur_garnettii
ENSHBUG00000005447	-	99	82.794	ENSOARG00000017454	SMARCA4	97	83.624	Ovis_aries
ENSHBUG00000005447	-	97	85.453	ENSPPAG00000043191	SMARCA4	100	83.952	Pan_paniscus
ENSHBUG00000005447	-	99	83.234	ENSPPRG00000000064	SMARCA4	100	83.981	Panthera_pardus
ENSHBUG00000005447	-	93	85.316	ENSPTIG00000017447	SMARCA4	100	77.999	Panthera_tigris_altaica
ENSHBUG00000005447	-	97	85.453	ENSPTRG00000010488	SMARCA4	100	83.952	Pan_troglodytes
ENSHBUG00000005447	-	97	86.416	ENSPANG00000011042	SMARCA4	99	84.113	Papio_anubis
ENSHBUG00000005447	-	95	85.923	ENSPKIG00000010087	-	96	85.732	Paramormyrops_kingsleyae
ENSHBUG00000005447	-	99	86.959	ENSPKIG00000007770	SMARCA4	99	86.574	Paramormyrops_kingsleyae
ENSHBUG00000005447	-	82	87.305	ENSPSIG00000005547	SMARCA4	100	78.462	Pelodiscus_sinensis
ENSHBUG00000005447	-	99	82.876	ENSPEMG00000020389	Smarca4	100	83.622	Peromyscus_maniculatus_bairdii
ENSHBUG00000005447	-	99	83.693	ENSPCIG00000017138	SMARCA4	100	84.173	Phascolarctos_cinereus
ENSHBUG00000005447	-	99	82.936	ENSPFOG00000007892	smarca4a	100	83.353	Poecilia_formosa
ENSHBUG00000005447	-	100	94.132	ENSPFOG00000012930	-	100	94.551	Poecilia_formosa
ENSHBUG00000005447	-	99	93.415	ENSPLAG00000018616	-	98	92.495	Poecilia_latipinna
ENSHBUG00000005447	-	98	85.657	ENSPLAG00000014294	smarca4a	100	83.532	Poecilia_latipinna
ENSHBUG00000005447	-	95	83.887	ENSPMEG00000003725	smarca4a	96	84.118	Poecilia_mexicana
ENSHBUG00000005447	-	98	92.981	ENSPMEG00000008929	-	96	94.680	Poecilia_mexicana
ENSHBUG00000005447	-	99	91.045	ENSPREG00000014823	-	96	94.515	Poecilia_reticulata
ENSHBUG00000005447	-	98	82.484	ENSPREG00000014608	smarca4a	100	83.323	Poecilia_reticulata
ENSHBUG00000005447	-	99	81.712	ENSPPYG00000009568	SMARCA4	100	81.856	Pongo_abelii
ENSHBUG00000005447	-	76	89.130	ENSPCAG00000014054	SMARCA4	73	88.889	Procavia_capensis
ENSHBUG00000005447	-	97	87.558	ENSPCOG00000023011	SMARCA4	100	83.802	Propithecus_coquereli
ENSHBUG00000005447	-	95	73.996	ENSPVAG00000007787	SMARCA4	96	74.786	Pteropus_vampyrus
ENSHBUG00000005447	-	100	98.745	ENSPNYG00000023995	-	100	98.745	Pundamilia_nyererei
ENSHBUG00000005447	-	98	86.930	ENSPNYG00000000717	smarca4a	96	85.904	Pundamilia_nyererei
ENSHBUG00000005447	-	98	87.176	ENSPNAG00000006636	-	93	87.746	Pygocentrus_nattereri
ENSHBUG00000005447	-	98	86.145	ENSPNAG00000024136	smarca4a	94	86.001	Pygocentrus_nattereri
ENSHBUG00000005447	-	99	82.965	ENSRNOG00000009271	Smarca4	100	83.713	Rattus_norvegicus
ENSHBUG00000005447	-	97	87.529	ENSRBIG00000038696	SMARCA4	99	83.832	Rhinopithecus_bieti
ENSHBUG00000005447	-	97	87.529	ENSRROG00000045509	SMARCA4	100	83.892	Rhinopithecus_roxellana
ENSHBUG00000005447	-	97	87.191	ENSSBOG00000026896	SMARCA4	99	84.172	Saimiri_boliviensis_boliviensis
ENSHBUG00000005447	-	97	85.964	ENSSHAG00000001642	SMARCA4	100	84.053	Sarcophilus_harrisii
ENSHBUG00000005447	-	94	84.271	ENSSFOG00015009921	-	88	90.766	Scleropages_formosus
ENSHBUG00000005447	-	98	88.800	ENSSFOG00015013823	smarca4	99	85.689	Scleropages_formosus
ENSHBUG00000005447	-	98	85.079	ENSSMAG00000003200	smarca4a	100	83.969	Scophthalmus_maximus
ENSHBUG00000005447	-	100	91.911	ENSSMAG00000014082	-	100	92.938	Scophthalmus_maximus
ENSHBUG00000005447	-	98	81.546	ENSSDUG00000017298	smarca4a	100	79.154	Seriola_dumerili
ENSHBUG00000005447	-	99	95.543	ENSSDUG00000005388	-	100	96.479	Seriola_dumerili
ENSHBUG00000005447	-	99	93.610	ENSSLDG00000023663	-	99	94.448	Seriola_lalandi_dorsalis
ENSHBUG00000005447	-	98	84.120	ENSSLDG00000024486	smarca4a	100	87.323	Seriola_lalandi_dorsalis
ENSHBUG00000005447	-	62	97.516	ENSSARG00000013477	SMARCA4	82	97.516	Sorex_araneus
ENSHBUG00000005447	-	95	80.651	ENSSPUG00000004558	SMARCA4	98	81.242	Sphenodon_punctatus
ENSHBUG00000005447	-	100	96.254	ENSSPAG00000012533	-	100	96.254	Stegastes_partitus
ENSHBUG00000005447	-	98	86.267	ENSSPAG00000004248	smarca4a	100	84.496	Stegastes_partitus
ENSHBUG00000005447	-	99	83.294	ENSSSCG00000013629	SMARCA4	100	83.981	Sus_scrofa
ENSHBUG00000005447	-	55	84.534	ENSTGUG00000015488	-	98	84.304	Taeniopygia_guttata
ENSHBUG00000005447	-	92	82.386	ENSTRUG00000004885	smarca4a	100	83.181	Takifugu_rubripes
ENSHBUG00000005447	-	95	92.449	ENSTRUG00000001378	SMARCA4	98	92.386	Takifugu_rubripes
ENSHBUG00000005447	-	99	90.745	ENSTNIG00000004536	SMARCA4	100	90.625	Tetraodon_nigroviridis
ENSHBUG00000005447	-	74	83.688	ENSTNIG00000004859	-	96	86.667	Tetraodon_nigroviridis
ENSHBUG00000005447	-	50	98.649	ENSTBEG00000000707	-	52	98.571	Tupaia_belangeri
ENSHBUG00000005447	-	99	80.927	ENSTTRG00000009519	SMARCA4	100	80.835	Tursiops_truncatus
ENSHBUG00000005447	-	99	83.323	ENSUAMG00000014661	SMARCA4	100	84.072	Ursus_americanus
ENSHBUG00000005447	-	94	90.649	ENSUMAG00000022005	SMARCA4	98	90.426	Ursus_maritimus
ENSHBUG00000005447	-	99	83.264	ENSVVUG00000017820	SMARCA4	97	84.072	Vulpes_vulpes
ENSHBUG00000005447	-	99	80.455	ENSXETG00000009355	smarca4	99	79.232	Xenopus_tropicalis
ENSHBUG00000005447	-	98	93.455	ENSXCOG00000013494	-	94	93.657	Xiphophorus_couchianus
ENSHBUG00000005447	-	100	94.943	ENSXMAG00000007030	-	100	95.184	Xiphophorus_maculatus
ENSHBUG00000005447	-	99	82.895	ENSXMAG00000006321	smarca4a	100	84.855	Xiphophorus_maculatus