EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000005451 (Gene tree)
Gene ID: 102305942
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 4508 bases
Position: chrJH425633.1:205802-210309
Accession: 102305942
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000004162	zf-C2H2	PF00096.26	3.4e-25	1	5
ENSHBUP00000004162	zf-C2H2	PF00096.26	3.4e-25	2	5
ENSHBUP00000004162	zf-C2H2	PF00096.26	3.4e-25	3	5
ENSHBUP00000004162	zf-C2H2	PF00096.26	3.4e-25	4	5
ENSHBUP00000004162	zf-C2H2	PF00096.26	3.4e-25	5	5
ENSHBUP00000004162	zf-met	PF12874.7	1.5e-07	1	2
ENSHBUP00000004162	zf-met	PF12874.7	1.5e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000009167	-	1423	XM_005941362	ENSHBUP00000004162	323 (aa)	XP_005941424	UPI0003AFE2D2

Gene Model

Click here to download ENSHBUG00000005451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000005451's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000005451	gfi1b	87	41.758	ENSHBUG00000002881	-	58	41.758
ENSHBUG00000005451	gfi1b	50	45.000	ENSHBUG00000002530	-	68	43.750
ENSHBUG00000005451	gfi1b	56	43.125	ENSHBUG00000002533	-	52	43.125
ENSHBUG00000005451	gfi1b	50	39.623	ENSHBUG00000004077	-	94	39.623
ENSHBUG00000005451	gfi1b	65	43.750	ENSHBUG00000002878	-	53	43.750
ENSHBUG00000005451	gfi1b	57	42.236	ENSHBUG00000003057	-	90	41.250
ENSHBUG00000005451	gfi1b	53	35.882	ENSHBUG00000014494	-	65	35.882
ENSHBUG00000005451	gfi1b	71	40.854	ENSHBUG00000014725	-	87	40.854
ENSHBUG00000005451	gfi1b	61	43.382	ENSHBUG00000021028	-	88	43.382
ENSHBUG00000005451	gfi1b	69	43.038	ENSHBUG00000012984	-	71	43.038
ENSHBUG00000005451	gfi1b	70	44.512	ENSHBUG00000005809	-	99	41.916
ENSHBUG00000005451	gfi1b	52	42.105	ENSHBUG00000020527	-	84	42.105
ENSHBUG00000005451	gfi1b	51	40.854	ENSHBUG00000013194	-	76	40.854
ENSHBUG00000005451	gfi1b	52	42.143	ENSHBUG00000015393	-	76	42.143
ENSHBUG00000005451	gfi1b	53	39.521	ENSHBUG00000016384	-	82	39.521
ENSHBUG00000005451	gfi1b	78	43.609	ENSHBUG00000009815	znf319b	82	43.609
ENSHBUG00000005451	gfi1b	52	43.066	ENSHBUG00000023209	-	87	43.066
ENSHBUG00000005451	gfi1b	70	45.000	ENSHBUG00000009274	-	84	45.000
ENSHBUG00000005451	gfi1b	51	43.972	ENSHBUG00000000099	-	84	43.972
ENSHBUG00000005451	gfi1b	50	48.182	ENSHBUG00000012215	-	91	48.182
ENSHBUG00000005451	gfi1b	85	47.468	ENSHBUG00000007068	-	79	47.468
ENSHBUG00000005451	gfi1b	51	46.835	ENSHBUG00000021906	-	66	46.835
ENSHBUG00000005451	gfi1b	52	41.139	ENSHBUG00000016546	-	58	41.139
ENSHBUG00000005451	gfi1b	57	43.023	ENSHBUG00000012432	-	70	43.023
ENSHBUG00000005451	gfi1b	64	37.500	ENSHBUG00000004217	-	61	37.500
ENSHBUG00000005451	gfi1b	55	50.000	ENSHBUG00000011194	-	79	50.000
ENSHBUG00000005451	gfi1b	59	39.873	ENSHBUG00000002961	-	97	39.873
ENSHBUG00000005451	gfi1b	54	35.897	ENSHBUG00000009720	-	61	35.897
ENSHBUG00000005451	gfi1b	56	45.625	ENSHBUG00000013490	-	65	45.625
ENSHBUG00000005451	gfi1b	54	37.013	ENSHBUG00000006656	-	55	37.013
ENSHBUG00000005451	gfi1b	53	40.625	ENSHBUG00000015719	-	94	40.625
ENSHBUG00000005451	gfi1b	51	46.429	ENSHBUG00000009941	-	58	46.429
ENSHBUG00000005451	gfi1b	57	45.865	ENSHBUG00000013518	-	83	45.865
ENSHBUG00000005451	gfi1b	51	50.365	ENSHBUG00000006984	-	97	50.365
ENSHBUG00000005451	gfi1b	70	39.394	ENSHBUG00000002307	-	69	42.958
ENSHBUG00000005451	gfi1b	58	41.593	ENSHBUG00000005848	-	90	41.593
ENSHBUG00000005451	gfi1b	74	43.846	ENSHBUG00000004718	-	87	43.750
ENSHBUG00000005451	gfi1b	70	50.000	ENSHBUG00000001075	-	87	48.214
ENSHBUG00000005451	gfi1b	68	42.262	ENSHBUG00000006250	-	88	42.262
ENSHBUG00000005451	gfi1b	52	44.910	ENSHBUG00000020071	-	50	44.910
ENSHBUG00000005451	gfi1b	51	46.358	ENSHBUG00000012230	-	65	46.358
ENSHBUG00000005451	gfi1b	50	46.903	ENSHBUG00000002541	-	66	46.903
ENSHBUG00000005451	gfi1b	95	43.750	ENSHBUG00000013542	-	75	43.750
ENSHBUG00000005451	gfi1b	53	43.478	ENSHBUG00000019377	-	65	43.478
ENSHBUG00000005451	gfi1b	54	38.750	ENSHBUG00000016334	-	57	38.750
ENSHBUG00000005451	gfi1b	54	36.154	ENSHBUG00000000731	-	56	36.154
ENSHBUG00000005451	gfi1b	83	44.444	ENSHBUG00000012758	-	99	44.444
ENSHBUG00000005451	gfi1b	51	43.609	ENSHBUG00000011944	-	58	43.609
ENSHBUG00000005451	gfi1b	93	39.873	ENSHBUG00000018502	-	61	39.873
ENSHBUG00000005451	gfi1b	58	50.388	ENSHBUG00000011725	-	70	50.388
ENSHBUG00000005451	gfi1b	54	36.667	ENSHBUG00000013296	-	97	37.349
ENSHBUG00000005451	gfi1b	54	36.932	ENSHBUG00000008502	-	73	36.932
ENSHBUG00000005451	gfi1b	54	37.267	ENSHBUG00000018885	-	57	37.267
ENSHBUG00000005451	gfi1b	69	48.125	ENSHBUG00000012565	-	95	48.125
ENSHBUG00000005451	gfi1b	84	40.127	ENSHBUG00000017372	-	90	43.972
ENSHBUG00000005451	gfi1b	69	42.105	ENSHBUG00000002320	-	62	42.105
ENSHBUG00000005451	gfi1b	89	40.708	ENSHBUG00000004840	znf646	54	40.708
ENSHBUG00000005451	gfi1b	52	41.964	ENSHBUG00000022063	-	59	41.964
ENSHBUG00000005451	gfi1b	54	37.778	ENSHBUG00000020544	-	85	37.778
ENSHBUG00000005451	gfi1b	84	43.689	ENSHBUG00000009953	-	84	43.689
ENSHBUG00000005451	gfi1b	52	37.956	ENSHBUG00000007764	snai2	57	37.956
ENSHBUG00000005451	gfi1b	52	41.667	ENSHBUG00000006238	-	94	41.667
ENSHBUG00000005451	gfi1b	51	46.203	ENSHBUG00000017869	-	71	46.203
ENSHBUG00000005451	gfi1b	50	47.706	ENSHBUG00000017864	-	89	47.706
ENSHBUG00000005451	gfi1b	52	42.500	ENSHBUG00000003165	-	60	42.500
ENSHBUG00000005451	gfi1b	71	38.971	ENSHBUG00000016927	-	54	38.971
ENSHBUG00000005451	gfi1b	51	42.105	ENSHBUG00000013065	-	51	42.105
ENSHBUG00000005451	gfi1b	58	34.454	ENSHBUG00000017445	zbtb41	58	34.454
ENSHBUG00000005451	gfi1b	59	45.513	ENSHBUG00000002526	-	66	45.513
ENSHBUG00000005451	gfi1b	58	40.854	ENSHBUG00000013264	-	89	40.854
ENSHBUG00000005451	gfi1b	52	44.604	ENSHBUG00000017924	-	51	44.604
ENSHBUG00000005451	gfi1b	51	45.570	ENSHBUG00000007316	-	67	45.570
ENSHBUG00000005451	gfi1b	58	42.073	ENSHBUG00000006863	-	91	42.073
ENSHBUG00000005451	gfi1b	54	41.463	ENSHBUG00000023375	prdm5	73	41.463
ENSHBUG00000005451	gfi1b	54	42.857	ENSHBUG00000019090	ZNF319	89	42.857
ENSHBUG00000005451	gfi1b	53	41.667	ENSHBUG00000021970	-	82	40.881
ENSHBUG00000005451	gfi1b	91	42.593	ENSHBUG00000002393	-	66	42.593
ENSHBUG00000005451	gfi1b	58	42.208	ENSHBUG00000000820	-	95	42.208
ENSHBUG00000005451	gfi1b	62	44.444	ENSHBUG00000000146	-	78	44.444
ENSHBUG00000005451	gfi1b	52	44.375	ENSHBUG00000022073	-	57	44.375
ENSHBUG00000005451	gfi1b	56	44.526	ENSHBUG00000002889	-	57	44.526
ENSHBUG00000005451	gfi1b	62	46.541	ENSHBUG00000015942	-	95	46.491
ENSHBUG00000005451	gfi1b	58	45.361	ENSHBUG00000021003	-	97	45.361
ENSHBUG00000005451	gfi1b	50	46.250	ENSHBUG00000018916	-	62	46.250
ENSHBUG00000005451	gfi1b	84	34.397	ENSHBUG00000007188	-	76	34.397
ENSHBUG00000005451	gfi1b	57	40.909	ENSHBUG00000006662	-	83	40.909
ENSHBUG00000005451	gfi1b	100	52.344	ENSHBUG00000011969	gfi1ab	100	52.344
ENSHBUG00000005451	gfi1b	54	47.059	ENSHBUG00000006977	-	50	47.059
ENSHBUG00000005451	gfi1b	57	45.161	ENSHBUG00000009837	znf236	54	45.161
ENSHBUG00000005451	gfi1b	94	45.000	ENSHBUG00000015166	-	85	45.000
ENSHBUG00000005451	gfi1b	52	39.286	ENSHBUG00000019800	-	85	39.286
ENSHBUG00000005451	gfi1b	58	39.506	ENSHBUG00000003449	-	93	39.506
ENSHBUG00000005451	gfi1b	50	41.558	ENSHBUG00000003529	-	88	41.558
ENSHBUG00000005451	gfi1b	56	39.695	ENSHBUG00000002841	-	73	39.695
ENSHBUG00000005451	gfi1b	52	44.961	ENSHBUG00000012007	-	70	44.961
ENSHBUG00000005451	gfi1b	61	42.537	ENSHBUG00000015404	-	72	42.537
ENSHBUG00000005451	gfi1b	85	39.286	ENSHBUG00000015803	-	97	39.286
ENSHBUG00000005451	gfi1b	53	41.250	ENSHBUG00000013292	-	65	41.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000005451	gfi1b	99	78.419	ENSAPOG00000001296	gfi1b	99	78.419	Acanthochromis_polyacanthus
ENSHBUG00000005451	gfi1b	100	76.292	ENSACIG00000002190	gfi1b	100	76.292	Amphilophus_citrinellus
ENSHBUG00000005451	gfi1b	99	78.116	ENSAOCG00000021187	gfi1b	99	78.116	Amphiprion_ocellaris
ENSHBUG00000005451	gfi1b	99	78.723	ENSAPEG00000016196	gfi1b	99	78.723	Amphiprion_percula
ENSHBUG00000005451	gfi1b	100	78.419	ENSATEG00000002534	gfi1b	100	78.419	Anabas_testudineus
ENSHBUG00000005451	gfi1b	100	58.772	ENSAPLG00000003373	GFI1B	100	58.772	Anas_platyrhynchos
ENSHBUG00000005451	gfi1b	100	100.000	ENSACLG00000027053	gfi1b	100	100.000	Astatotilapia_calliptera
ENSHBUG00000005451	gfi1b	100	67.656	ENSAMXG00000037544	GFI1B	100	67.656	Astyanax_mexicanus
ENSHBUG00000005451	gfi1b	100	55.952	ENSCAPG00000010404	GFI1B	100	55.952	Cavia_aperea
ENSHBUG00000005451	gfi1b	100	55.682	ENSCPBG00000021186	GFI1B	100	55.682	Chrysemys_picta_bellii
ENSHBUG00000005451	gfi1b	100	73.636	ENSCSEG00000001315	gfi1b	100	73.636	Cynoglossus_semilaevis
ENSHBUG00000005451	gfi1b	100	70.091	ENSCVAG00000017168	gfi1b	100	70.091	Cyprinodon_variegatus
ENSHBUG00000005451	gfi1b	100	67.257	ENSDARG00000079947	gfi1b	99	82.278	Danio_rerio
ENSHBUG00000005451	gfi1b	63	51.471	ENSEEUG00000012609	-	90	51.471	Erinaceus_europaeus
ENSHBUG00000005451	gfi1b	99	68.750	ENSELUG00000016933	gfi1b	99	68.750	Esox_lucius
ENSHBUG00000005451	gfi1b	100	53.659	ENSFALG00000001479	GFI1B	100	53.659	Ficedula_albicollis
ENSHBUG00000005451	gfi1b	100	75.000	ENSFHEG00000015138	gfi1b	100	75.000	Fundulus_heteroclitus
ENSHBUG00000005451	gfi1b	73	80.658	ENSGMOG00000019123	gfi1b	91	80.658	Gadus_morhua
ENSHBUG00000005451	gfi1b	100	56.851	ENSGALG00000003478	GFI1B	100	56.851	Gallus_gallus
ENSHBUG00000005451	gfi1b	75	86.777	ENSGAFG00000003059	gfi1b	100	86.777	Gambusia_affinis
ENSHBUG00000005451	gfi1b	100	70.255	ENSGACG00000018134	gfi1b	100	70.255	Gasterosteus_aculeatus
ENSHBUG00000005451	gfi1b	100	57.478	ENSGAGG00000021327	GFI1B	100	57.478	Gopherus_agassizii
ENSHBUG00000005451	gfi1b	99	71.560	ENSHCOG00000013713	gfi1b	99	71.560	Hippocampus_comes
ENSHBUG00000005451	gfi1b	100	69.162	ENSIPUG00000012769	gfi1b	100	69.162	Ictalurus_punctatus
ENSHBUG00000005451	gfi1b	99	49.867	ENSJJAG00000016355	Gfi1b	100	49.867	Jaculus_jaculus
ENSHBUG00000005451	gfi1b	100	73.333	ENSKMAG00000016047	gfi1b	100	73.333	Kryptolebias_marmoratus
ENSHBUG00000005451	gfi1b	99	75.380	ENSLBEG00000020297	gfi1b	99	75.684	Labrus_bergylta
ENSHBUG00000005451	gfi1b	100	59.819	ENSLACG00000012207	GFI1B	100	59.819	Latimeria_chalumnae
ENSHBUG00000005451	gfi1b	99	64.583	ENSLOCG00000005750	gfi1b	99	64.583	Lepisosteus_oculatus
ENSHBUG00000005451	gfi1b	100	55.882	ENSLAFG00000022367	GFI1B	100	55.882	Loxodonta_africana
ENSHBUG00000005451	gfi1b	100	78.963	ENSMAMG00000003040	gfi1b	100	78.963	Mastacembelus_armatus
ENSHBUG00000005451	gfi1b	100	99.381	ENSMZEG00005015594	gfi1b	100	99.381	Maylandia_zebra
ENSHBUG00000005451	gfi1b	100	57.143	ENSMGAG00000006129	GFI1B	100	57.143	Meleagris_gallopavo
ENSHBUG00000005451	gfi1b	99	77.134	ENSMMOG00000011764	gfi1b	99	77.134	Mola_mola
ENSHBUG00000005451	gfi1b	99	49.606	ENSMODG00000012600	GFI1B	99	49.606	Monodelphis_domestica
ENSHBUG00000005451	gfi1b	99	77.064	ENSMALG00000004034	gfi1b	99	77.064	Monopterus_albus
ENSHBUG00000005451	gfi1b	99	56.637	ENSNGAG00000003333	Gfi1b	100	56.637	Nannospalax_galili
ENSHBUG00000005451	gfi1b	52	67.407	ENSNBRG00000012376	-	100	67.407	Neolamprologus_brichardi
ENSHBUG00000005451	gfi1b	100	97.568	ENSNBRG00000012391	gfi1b	100	97.568	Neolamprologus_brichardi
ENSHBUG00000005451	gfi1b	100	96.353	ENSONIG00000013011	gfi1b	100	96.353	Oreochromis_niloticus
ENSHBUG00000005451	gfi1b	100	58.631	ENSOANG00000014723	GFI1B	100	58.631	Ornithorhynchus_anatinus
ENSHBUG00000005451	gfi1b	100	56.098	ENSORLG00000014390	GFI1B	96	65.217	Oryzias_latipes
ENSHBUG00000005451	gfi1b	100	71.037	ENSORLG00020003719	GFI1B	100	71.037	Oryzias_latipes_hni
ENSHBUG00000005451	gfi1b	100	70.427	ENSORLG00015017142	gfi1b	100	70.427	Oryzias_latipes_hsok
ENSHBUG00000005451	gfi1b	100	71.341	ENSOMEG00000015149	GFI1B	100	71.341	Oryzias_melastigma
ENSHBUG00000005451	gfi1b	100	57.396	ENSOGAG00000008879	GFI1B	100	57.692	Otolemur_garnettii
ENSHBUG00000005451	gfi1b	100	66.964	ENSPKIG00000007643	gfi1b	100	66.964	Paramormyrops_kingsleyae
ENSHBUG00000005451	gfi1b	100	55.807	ENSPSIG00000012112	GFI1B	100	55.807	Pelodiscus_sinensis
ENSHBUG00000005451	gfi1b	99	64.634	ENSPMGG00000006021	gfi1b	99	62.798	Periophthalmus_magnuspinnatus
ENSHBUG00000005451	gfi1b	99	49.326	ENSPCIG00000019724	GFI1B	99	49.326	Phascolarctos_cinereus
ENSHBUG00000005451	gfi1b	100	75.522	ENSPFOG00000003460	gfi1b	100	75.522	Poecilia_formosa
ENSHBUG00000005451	gfi1b	100	76.900	ENSPLAG00000021960	GFI1B	100	76.900	Poecilia_latipinna
ENSHBUG00000005451	gfi1b	99	74.556	ENSPLAG00000017181	GFI1B	99	74.556	Poecilia_latipinna
ENSHBUG00000005451	gfi1b	100	76.292	ENSPMEG00000019220	gfi1b	100	76.292	Poecilia_mexicana
ENSHBUG00000005451	gfi1b	100	76.292	ENSPMEG00000001556	GFI1B	100	76.292	Poecilia_mexicana
ENSHBUG00000005451	gfi1b	100	75.988	ENSPREG00000021718	gfi1b	100	75.988	Poecilia_reticulata
ENSHBUG00000005451	gfi1b	100	94.737	ENSPNYG00000018422	gfi1b	100	94.737	Pundamilia_nyererei
ENSHBUG00000005451	gfi1b	100	68.452	ENSPNAG00000021118	gfi1b	100	68.452	Pygocentrus_nattereri
ENSHBUG00000005451	gfi1b	99	46.381	ENSSHAG00000006462	GFI1B	99	46.381	Sarcophilus_harrisii
ENSHBUG00000005451	gfi1b	83	61.429	ENSSFOG00015011566	gfi1b	90	61.429	Scleropages_formosus
ENSHBUG00000005451	gfi1b	99	74.006	ENSSMAG00000015181	gfi1b	99	73.700	Scophthalmus_maximus
ENSHBUG00000005451	gfi1b	100	79.205	ENSSDUG00000011604	gfi1b	100	79.205	Seriola_dumerili
ENSHBUG00000005451	gfi1b	100	78.593	ENSSLDG00000013823	gfi1b	100	78.593	Seriola_lalandi_dorsalis
ENSHBUG00000005451	gfi1b	99	48.424	ENSSPUG00000016039	GFI1B	99	48.424	Sphenodon_punctatus
ENSHBUG00000005451	gfi1b	100	76.829	ENSSPAG00000022914	gfi1b	100	76.829	Stegastes_partitus
ENSHBUG00000005451	gfi1b	51	90.351	ENSTGUG00000005282	-	99	90.351	Taeniopygia_guttata
ENSHBUG00000005451	gfi1b	99	74.312	ENSTRUG00000004525	gfi1b	99	74.312	Takifugu_rubripes
ENSHBUG00000005451	gfi1b	99	72.866	ENSTNIG00000003834	gfi1b	99	72.866	Tetraodon_nigroviridis
ENSHBUG00000005451	gfi1b	100	41.954	ENSTBEG00000014459	GFI1B	100	41.954	Tupaia_belangeri
ENSHBUG00000005451	gfi1b	99	57.185	ENSXETG00000006263	gfi1b	99	59.581	Xenopus_tropicalis
ENSHBUG00000005451	gfi1b	100	76.596	ENSXMAG00000027589	gfi1b	100	76.596	Xiphophorus_maculatus