EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000005629 (Gene tree)
Gene ID: 102291587
Gene Symbol: sfswap
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 50372 bases
Position: chrJH425589.1:638713-689084
Accession: 102291587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000024306	DRY_EERY	PF09750.9	1.3e-31	1	1
ENSHBUP00000004340	DRY_EERY	PF09750.9	1.4e-31	1	1
ENSHBUP00000024306	Surp	PF01805.20	2.6e-28	1	2
ENSHBUP00000024306	Surp	PF01805.20	2.6e-28	2	2
ENSHBUP00000004340	Surp	PF01805.20	2.9e-28	1	2
ENSHBUP00000004340	Surp	PF01805.20	2.9e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000008869	-	4027	XM_005939472	ENSHBUP00000004340	966 (aa)	XP_005939534	UPI0003BCF1D6
ENSHBUT00000008881	-	3954	-	ENSHBUP00000024306	922 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000005629's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000005629's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000005629	sfswap	56	68.464	ENSG00000061936	SFSWAP	84	66.346	Homo_sapiens
ENSHBUG00000005629	sfswap	78	85.833	ENSAPOG00000005784	sfswap	76	85.833	Acanthochromis_polyacanthus
ENSHBUG00000005629	sfswap	70	59.078	ENSAMEG00000013818	SFSWAP	73	57.815	Ailuropoda_melanoleuca
ENSHBUG00000005629	sfswap	78	86.269	ENSAOCG00000016469	sfswap	75	86.269	Amphiprion_ocellaris
ENSHBUG00000005629	sfswap	78	86.546	ENSAPEG00000004965	sfswap	76	86.546	Amphiprion_percula
ENSHBUG00000005629	sfswap	78	81.706	ENSATEG00000021053	sfswap	79	81.706	Anabas_testudineus
ENSHBUG00000005629	sfswap	79	59.021	ENSACAG00000007220	SFSWAP	89	56.884	Anolis_carolinensis
ENSHBUG00000005629	sfswap	70	60.519	ENSANAG00000001518	SFSWAP	73	59.034	Aotus_nancymaae
ENSHBUG00000005629	sfswap	100	97.930	ENSACLG00000020159	sfswap	100	97.930	Astatotilapia_calliptera
ENSHBUG00000005629	sfswap	73	66.900	ENSAMXG00000008657	sfswap	72	66.056	Astyanax_mexicanus
ENSHBUG00000005629	sfswap	82	59.483	ENSBTAG00000000439	SFSWAP	77	59.695	Bos_taurus
ENSHBUG00000005629	sfswap	97	50.506	ENSCJAG00000003613	SFSWAP	77	58.678	Callithrix_jacchus
ENSHBUG00000005629	sfswap	97	50.251	ENSCAFG00000006625	SFSWAP	71	59.740	Canis_familiaris
ENSHBUG00000005629	sfswap	74	51.053	ENSCAFG00020011254	SFSWAP	68	52.920	Canis_lupus_dingo
ENSHBUG00000005629	sfswap	82	59.770	ENSCHIG00000008838	SFSWAP	72	60.086	Capra_hircus
ENSHBUG00000005629	sfswap	55	66.871	ENSCAPG00000004394	SFSWAP	69	59.304	Cavia_aperea
ENSHBUG00000005629	sfswap	70	59.078	ENSCATG00000031094	SFSWAP	73	59.034	Cercocebus_atys
ENSHBUG00000005629	sfswap	75	60.317	ENSCHOG00000003578	SFSWAP	64	60.317	Choloepus_hoffmanni
ENSHBUG00000005629	sfswap	83	58.898	ENSCPBG00000024757	SFSWAP	86	60.169	Chrysemys_picta_bellii
ENSHBUG00000005629	sfswap	79	75.951	ENSCSEG00000003773	sfswap	76	76.575	Cynoglossus_semilaevis
ENSHBUG00000005629	sfswap	58	72.197	ENSCVAG00000001205	-	75	69.456	Cyprinodon_variegatus
ENSHBUG00000005629	sfswap	73	69.559	ENSDARG00000005980	sfswap	73	67.697	Danio_rerio
ENSHBUG00000005629	sfswap	97	48.755	ENSDNOG00000018742	SFSWAP	69	59.155	Dasypus_novemcinctus
ENSHBUG00000005629	sfswap	70	52.746	ENSDORG00000010352	Sfswap	72	52.722	Dipodomys_ordii
ENSHBUG00000005629	sfswap	60	39.394	FBgn0003638	su(w[a])	56	57.303	Drosophila_melanogaster
ENSHBUG00000005629	sfswap	73	37.482	ENSEBUG00000016748	SFSWAP	76	37.305	Eptatretus_burgeri
ENSHBUG00000005629	sfswap	82	60.951	ENSEASG00005016502	SFSWAP	74	58.611	Equus_asinus_asinus
ENSHBUG00000005629	sfswap	80	60.951	ENSECAG00000007657	SFSWAP	74	58.611	Equus_caballus
ENSHBUG00000005629	sfswap	70	67.763	ENSEEUG00000001713	SFSWAP	61	67.097	Erinaceus_europaeus
ENSHBUG00000005629	sfswap	88	65.212	ENSELUG00000010942	sfswap	94	63.543	Esox_lucius
ENSHBUG00000005629	sfswap	54	66.129	ENSFCAG00000010778	SFSWAP	73	58.971	Felis_catus
ENSHBUG00000005629	sfswap	69	59.302	ENSFALG00000009577	SFSWAP	70	58.215	Ficedula_albicollis
ENSHBUG00000005629	sfswap	52	82.877	ENSGMOG00000009205	sfswap	69	82.877	Gadus_morhua
ENSHBUG00000005629	sfswap	83	73.939	ENSGACG00000017647	sfswap	87	75.455	Gasterosteus_aculeatus
ENSHBUG00000005629	sfswap	83	59.040	ENSGAGG00000002611	SFSWAP	86	59.831	Gopherus_agassizii
ENSHBUG00000005629	sfswap	89	66.846	ENSHGLG00000019216	SFSWAP	73	59.639	Heterocephalus_glaber_female
ENSHBUG00000005629	sfswap	89	67.027	ENSHGLG00100019350	SFSWAP	73	59.778	Heterocephalus_glaber_male
ENSHBUG00000005629	sfswap	78	73.014	ENSHCOG00000009475	sfswap	77	72.343	Hippocampus_comes
ENSHBUG00000005629	sfswap	82	73.171	ENSIPUG00000010598	sfswap	85	64.331	Ictalurus_punctatus
ENSHBUG00000005629	sfswap	83	59.397	ENSJJAG00000006609	Sfswap	74	58.645	Jaculus_jaculus
ENSHBUG00000005629	sfswap	78	81.044	ENSKMAG00000013168	sfswap	75	81.181	Kryptolebias_marmoratus
ENSHBUG00000005629	sfswap	75	80.029	ENSLBEG00000010239	sfswap	78	80.314	Labrus_bergylta
ENSHBUG00000005629	sfswap	69	60.584	ENSLACG00000018678	SFSWAP	69	59.004	Latimeria_chalumnae
ENSHBUG00000005629	sfswap	76	61.631	ENSLOCG00000006202	sfswap	76	62.400	Lepisosteus_oculatus
ENSHBUG00000005629	sfswap	52	66.972	ENSLAFG00000014462	SFSWAP	89	58.988	Loxodonta_africana
ENSHBUG00000005629	sfswap	84	60.689	ENSMFAG00000037352	SFSWAP	70	58.897	Macaca_fascicularis
ENSHBUG00000005629	sfswap	70	60.776	ENSMMUG00000020343	SFSWAP	73	58.897	Macaca_mulatta
ENSHBUG00000005629	sfswap	70	60.776	ENSMNEG00000041002	SFSWAP	73	58.897	Macaca_nemestrina
ENSHBUG00000005629	sfswap	75	82.830	ENSMAMG00000006631	sfswap	76	83.939	Mastacembelus_armatus
ENSHBUG00000005629	sfswap	99	97.828	ENSMZEG00005017834	SFSWAP	99	96.366	Maylandia_zebra
ENSHBUG00000005629	sfswap	56	64.885	ENSMOCG00000014390	Sfswap	74	58.219	Microtus_ochrogaster
ENSHBUG00000005629	sfswap	79	93.182	ENSMALG00000012603	sfswap	82	79.092	Monopterus_albus
ENSHBUG00000005629	sfswap	54	67.655	ENSMUSG00000029439	Sfswap	84	64.423	Mus_musculus
ENSHBUG00000005629	sfswap	82	64.885	MGP_PahariEiJ_G0024360	Sfswap	84	65.385	Mus_pahari
ENSHBUG00000005629	sfswap	54	67.655	MGP_SPRETEiJ_G0028779	Sfswap	84	64.423	Mus_spretus
ENSHBUG00000005629	sfswap	70	59.942	ENSMLUG00000011296	SFSWAP	77	59.167	Myotis_lucifugus
ENSHBUG00000005629	sfswap	94	96.382	ENSNBRG00000020857	sfswap	100	96.382	Neolamprologus_brichardi
ENSHBUG00000005629	sfswap	84	60.201	ENSNLEG00000008386	SFSWAP	74	60.333	Nomascus_leucogenys
ENSHBUG00000005629	sfswap	71	60.750	ENSOPRG00000006983	-	85	53.055	Ochotona_princeps
ENSHBUG00000005629	sfswap	91	64.631	ENSODEG00000008020	SFSWAP	75	58.401	Octodon_degus
ENSHBUG00000005629	sfswap	100	92.761	ENSONIG00000003757	sfswap	100	92.761	Oreochromis_niloticus
ENSHBUG00000005629	sfswap	100	74.385	ENSORLG00000010983	sfswap	77	79.201	Oryzias_latipes
ENSHBUG00000005629	sfswap	74	79.201	ENSORLG00020010779	sfswap	77	79.063	Oryzias_latipes_hni
ENSHBUG00000005629	sfswap	74	79.780	ENSORLG00015023093	sfswap	77	79.642	Oryzias_latipes_hsok
ENSHBUG00000005629	sfswap	82	78.760	ENSOMEG00000022065	sfswap	77	81.302	Oryzias_melastigma
ENSHBUG00000005629	sfswap	85	66.220	ENSOGAG00000016724	SFSWAP	82	57.772	Otolemur_garnettii
ENSHBUG00000005629	sfswap	82	59.770	ENSOARG00000014314	SFSWAP	74	58.726	Ovis_aries
ENSHBUG00000005629	sfswap	56	68.464	ENSPPAG00000036706	SFSWAP	76	59.310	Pan_paniscus
ENSHBUG00000005629	sfswap	69	60.174	ENSPPRG00000017318	SFSWAP	69	58.251	Panthera_pardus
ENSHBUG00000005629	sfswap	82	57.122	ENSPTIG00000004304	SFSWAP	70	64.230	Panthera_tigris_altaica
ENSHBUG00000005629	sfswap	56	68.464	ENSPTRG00000005640	SFSWAP	76	59.310	Pan_troglodytes
ENSHBUG00000005629	sfswap	70	59.078	ENSPANG00000019737	SFSWAP	73	59.034	Papio_anubis
ENSHBUG00000005629	sfswap	75	65.517	ENSPKIG00000008327	sfswap	76	66.160	Paramormyrops_kingsleyae
ENSHBUG00000005629	sfswap	65	64.103	ENSPEMG00000001237	Sfswap	74	57.729	Peromyscus_maniculatus_bairdii
ENSHBUG00000005629	sfswap	76	79.892	ENSPFOG00000019657	sfswap	79	79.892	Poecilia_formosa
ENSHBUG00000005629	sfswap	76	79.892	ENSPLAG00000008513	sfswap	79	79.892	Poecilia_latipinna
ENSHBUG00000005629	sfswap	74	80.780	ENSPMEG00000008716	sfswap	79	79.919	Poecilia_mexicana
ENSHBUG00000005629	sfswap	76	79.487	ENSPREG00000006692	sfswap	79	79.515	Poecilia_reticulata
ENSHBUG00000005629	sfswap	82	67.560	ENSPPYG00000005129	SFSWAP	74	59.034	Pongo_abelii
ENSHBUG00000005629	sfswap	52	61.460	ENSPCAG00000004977	-	59	57.115	Procavia_capensis
ENSHBUG00000005629	sfswap	74	65.882	ENSPVAG00000014918	SFSWAP	61	65.882	Pteropus_vampyrus
ENSHBUG00000005629	sfswap	100	98.465	ENSPNYG00000012660	sfswap	100	98.465	Pundamilia_nyererei
ENSHBUG00000005629	sfswap	75	74.576	ENSPNAG00000007073	sfswap	73	69.188	Pygocentrus_nattereri
ENSHBUG00000005629	sfswap	54	67.655	ENSRNOG00000000931	Sfswap	98	43.952	Rattus_norvegicus
ENSHBUG00000005629	sfswap	86	57.934	ENSRBIG00000036330	SFSWAP	72	58.382	Rhinopithecus_bieti
ENSHBUG00000005629	sfswap	56	67.560	ENSRROG00000032001	SFSWAP	73	58.897	Rhinopithecus_roxellana
ENSHBUG00000005629	sfswap	97	49.571	ENSSBOG00000026217	SFSWAP	74	58.016	Saimiri_boliviensis_boliviensis
ENSHBUG00000005629	sfswap	78	57.466	ENSSHAG00000014232	SFSWAP	73	56.891	Sarcophilus_harrisii
ENSHBUG00000005629	sfswap	68	68.645	ENSSFOG00015000766	sfswap	70	68.493	Scleropages_formosus
ENSHBUG00000005629	sfswap	78	78.825	ENSSMAG00000018718	sfswap	76	78.962	Scophthalmus_maximus
ENSHBUG00000005629	sfswap	78	84.732	ENSSDUG00000021680	sfswap	74	84.732	Seriola_dumerili
ENSHBUG00000005629	sfswap	78	84.457	ENSSLDG00000010835	sfswap	74	84.457	Seriola_lalandi_dorsalis
ENSHBUG00000005629	sfswap	69	69.643	ENSSARG00000000424	SFSWAP	74	59.366	Sorex_araneus
ENSHBUG00000005629	sfswap	72	53.577	ENSSPUG00000010272	SFSWAP	89	56.551	Sphenodon_punctatus
ENSHBUG00000005629	sfswap	77	84.743	ENSSPAG00000014310	sfswap	77	84.435	Stegastes_partitus
ENSHBUG00000005629	sfswap	82	61.151	ENSSSCG00000009744	SFSWAP	87	52.120	Sus_scrofa
ENSHBUG00000005629	sfswap	82	61.239	ENSTGUG00000004623	SFSWAP	73	60.913	Taeniopygia_guttata
ENSHBUG00000005629	sfswap	61	78.049	ENSTTRG00000013478	SFSWAP	73	54.558	Tursiops_truncatus
ENSHBUG00000005629	sfswap	54	66.220	ENSUAMG00000016807	SFSWAP	73	57.836	Ursus_americanus
ENSHBUG00000005629	sfswap	60	67.536	ENSUMAG00000002957	SFSWAP	75	56.189	Ursus_maritimus
ENSHBUG00000005629	sfswap	84	58.213	ENSVVUG00000010753	SFSWAP	71	59.740	Vulpes_vulpes
ENSHBUG00000005629	sfswap	82	54.663	ENSXETG00000009350	sfswap	88	57.986	Xenopus_tropicalis
ENSHBUG00000005629	sfswap	75	80.663	ENSXMAG00000009020	sfswap	79	80.162	Xiphophorus_maculatus