EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000005659 (Gene tree)
Gene ID: 102300478
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 6320 bases
Position: chrJH425360.1:2684914-2691233
Accession: 102300478
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000004343	MMR_HSR1	PF01926.23	5.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000008862	-	1923	XM_005920973	ENSHBUP00000004343	640 (aa)	XP_005921035	-

Gene Model

Click here to download ENSHBUG00000005659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000005659's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000005659	lsg1	99	63.731	ENSG00000041802	LSG1	98	74.713	Homo_sapiens
ENSHBUG00000005659	lsg1	100	81.453	ENSAPOG00000009694	lsg1	100	81.832	Acanthochromis_polyacanthus
ENSHBUG00000005659	lsg1	100	63.213	ENSAMEG00000009343	LSG1	100	63.024	Ailuropoda_melanoleuca
ENSHBUG00000005659	lsg1	98	90.779	ENSACIG00000012406	lsg1	100	90.654	Amphilophus_citrinellus
ENSHBUG00000005659	lsg1	100	81.327	ENSAOCG00000016066	lsg1	100	82.143	Amphiprion_ocellaris
ENSHBUG00000005659	lsg1	100	81.173	ENSAPEG00000003252	lsg1	100	81.988	Amphiprion_percula
ENSHBUG00000005659	lsg1	98	83.758	ENSATEG00000011794	lsg1	100	83.619	Anabas_testudineus
ENSHBUG00000005659	lsg1	95	61.526	ENSACAG00000004222	LSG1	100	61.356	Anolis_carolinensis
ENSHBUG00000005659	lsg1	99	65.046	ENSANAG00000021153	LSG1	99	63.801	Aotus_nancymaae
ENSHBUG00000005659	lsg1	100	98.457	ENSACLG00000000520	lsg1	100	98.457	Astatotilapia_calliptera
ENSHBUG00000005659	lsg1	100	73.570	ENSAMXG00000008271	lsg1	100	74.383	Astyanax_mexicanus
ENSHBUG00000005659	lsg1	99	64.350	ENSBTAG00000008461	LSG1	99	64.502	Bos_taurus
ENSHBUG00000005659	lsg1	80	43.893	WBGene00016907	C53H9.2	94	51.852	Caenorhabditis_elegans
ENSHBUG00000005659	lsg1	99	65.046	ENSCJAG00000013962	LSG1	99	63.952	Callithrix_jacchus
ENSHBUG00000005659	lsg1	95	64.013	ENSCAFG00000013445	LSG1	100	64.511	Canis_familiaris
ENSHBUG00000005659	lsg1	100	63.444	ENSCAFG00020002216	LSG1	100	63.348	Canis_lupus_dingo
ENSHBUG00000005659	lsg1	100	64.688	ENSCHIG00000015769	LSG1	100	64.536	Capra_hircus
ENSHBUG00000005659	lsg1	99	63.885	ENSTSYG00000001447	LSG1	99	63.855	Carlito_syrichta
ENSHBUG00000005659	lsg1	95	65.681	ENSCAPG00000009856	LSG1	99	66.010	Cavia_aperea
ENSHBUG00000005659	lsg1	99	64.840	ENSCCAG00000035744	LSG1	99	63.595	Cebus_capucinus
ENSHBUG00000005659	lsg1	99	63.582	ENSCATG00000042060	LSG1	99	62.293	Cercocebus_atys
ENSHBUG00000005659	lsg1	99	63.433	ENSCSAG00000008796	LSG1	92	63.348	Chlorocebus_sabaeus
ENSHBUG00000005659	lsg1	100	66.417	ENSCPBG00000015941	LSG1	83	65.634	Chrysemys_picta_bellii
ENSHBUG00000005659	lsg1	78	53.012	ENSCING00000007079	-	94	59.184	Ciona_intestinalis
ENSHBUG00000005659	lsg1	78	54.217	ENSCSAVG00000002514	-	97	54.217	Ciona_savignyi
ENSHBUG00000005659	lsg1	99	63.830	ENSCANG00000030709	LSG1	99	62.896	Colobus_angolensis_palliatus
ENSHBUG00000005659	lsg1	99	64.352	ENSCGRG00001019846	Lsg1	99	64.969	Cricetulus_griseus_chok1gshd
ENSHBUG00000005659	lsg1	99	63.902	ENSCGRG00000014617	Lsg1	99	64.188	Cricetulus_griseus_crigri
ENSHBUG00000005659	lsg1	98	78.019	ENSCSEG00000008522	lsg1	100	77.845	Cynoglossus_semilaevis
ENSHBUG00000005659	lsg1	98	81.440	ENSCVAG00000002484	lsg1	100	81.279	Cyprinodon_variegatus
ENSHBUG00000005659	lsg1	100	75.580	ENSDARG00000015352	lsg1	100	75.734	Danio_rerio
ENSHBUG00000005659	lsg1	99	63.801	ENSDNOG00000006224	LSG1	99	63.348	Dasypus_novemcinctus
ENSHBUG00000005659	lsg1	99	49.228	FBgn0266284	Ns3	99	49.228	Drosophila_melanogaster
ENSHBUG00000005659	lsg1	88	74.667	ENSETEG00000003888	LSG1	89	74.667	Echinops_telfairi
ENSHBUG00000005659	lsg1	88	55.724	ENSEBUG00000003119	lsg1	85	55.387	Eptatretus_burgeri
ENSHBUG00000005659	lsg1	99	63.001	ENSEASG00005000678	LSG1	99	63.433	Equus_asinus_asinus
ENSHBUG00000005659	lsg1	99	63.001	ENSECAG00000017659	LSG1	99	63.528	Equus_caballus
ENSHBUG00000005659	lsg1	87	58.974	ENSEEUG00000015217	LSG1	87	58.974	Erinaceus_europaeus
ENSHBUG00000005659	lsg1	100	72.366	ENSELUG00000023973	lsg1	100	72.366	Esox_lucius
ENSHBUG00000005659	lsg1	100	63.868	ENSFCAG00000024957	LSG1	100	64.018	Felis_catus
ENSHBUG00000005659	lsg1	99	60.061	ENSFALG00000007210	LSG1	99	60.030	Ficedula_albicollis
ENSHBUG00000005659	lsg1	99	62.844	ENSFDAG00000017373	LSG1	99	64.679	Fukomys_damarensis
ENSHBUG00000005659	lsg1	98	81.804	ENSFHEG00000003680	lsg1	100	81.972	Fundulus_heteroclitus
ENSHBUG00000005659	lsg1	98	69.984	ENSGMOG00000015834	lsg1	91	79.121	Gadus_morhua
ENSHBUG00000005659	lsg1	99	60.542	ENSGALG00000007058	LSG1	87	60.837	Gallus_gallus
ENSHBUG00000005659	lsg1	98	82.109	ENSGAFG00000015831	lsg1	100	82.243	Gambusia_affinis
ENSHBUG00000005659	lsg1	98	81.073	ENSGACG00000009323	lsg1	100	80.989	Gasterosteus_aculeatus
ENSHBUG00000005659	lsg1	99	63.731	ENSGGOG00000000520	LSG1	99	63.609	Gorilla_gorilla
ENSHBUG00000005659	lsg1	99	62.366	ENSHGLG00000017390	LSG1	99	62.538	Heterocephalus_glaber_female
ENSHBUG00000005659	lsg1	99	62.366	ENSHGLG00100018587	LSG1	99	62.538	Heterocephalus_glaber_male
ENSHBUG00000005659	lsg1	98	79.305	ENSHCOG00000016848	lsg1	100	79.199	Hippocampus_comes
ENSHBUG00000005659	lsg1	100	73.953	ENSIPUG00000008631	lsg1	100	74.264	Ictalurus_punctatus
ENSHBUG00000005659	lsg1	75	58.648	ENSSTOG00000010234	LSG1	92	59.802	Ictidomys_tridecemlineatus
ENSHBUG00000005659	lsg1	99	65.278	ENSJJAG00000015513	Lsg1	99	65.586	Jaculus_jaculus
ENSHBUG00000005659	lsg1	98	77.302	ENSKMAG00000009681	lsg1	100	77.605	Kryptolebias_marmoratus
ENSHBUG00000005659	lsg1	98	79.332	ENSLBEG00000024261	lsg1	100	79.595	Labrus_bergylta
ENSHBUG00000005659	lsg1	100	66.265	ENSLACG00000013399	LSG1	100	66.265	Latimeria_chalumnae
ENSHBUG00000005659	lsg1	98	72.057	ENSLOCG00000004918	lsg1	100	72.519	Lepisosteus_oculatus
ENSHBUG00000005659	lsg1	99	63.897	ENSLAFG00000012919	-	99	64.286	Loxodonta_africana
ENSHBUG00000005659	lsg1	99	63.433	ENSMFAG00000039903	LSG1	99	62.142	Macaca_fascicularis
ENSHBUG00000005659	lsg1	99	63.433	ENSMMUG00000010708	LSG1	99	63.348	Macaca_mulatta
ENSHBUG00000005659	lsg1	99	63.433	ENSMNEG00000031538	LSG1	99	62.443	Macaca_nemestrina
ENSHBUG00000005659	lsg1	99	63.134	ENSMLEG00000041184	LSG1	99	63.348	Mandrillus_leucophaeus
ENSHBUG00000005659	lsg1	100	80.341	ENSMAMG00000000470	lsg1	100	80.341	Mastacembelus_armatus
ENSHBUG00000005659	lsg1	100	99.688	ENSMZEG00005017865	lsg1	100	99.688	Maylandia_zebra
ENSHBUG00000005659	lsg1	88	62.649	ENSMGAG00000007050	LSG1	99	62.017	Meleagris_gallopavo
ENSHBUG00000005659	lsg1	91	63.069	ENSMAUG00000016976	Lsg1	93	63.912	Mesocricetus_auratus
ENSHBUG00000005659	lsg1	99	63.415	ENSMICG00000049087	LSG1	99	62.158	Microcebus_murinus
ENSHBUG00000005659	lsg1	99	63.553	ENSMOCG00000022136	Lsg1	99	64.308	Microtus_ochrogaster
ENSHBUG00000005659	lsg1	85	91.250	ENSMMOG00000008884	lsg1	100	77.379	Mola_mola
ENSHBUG00000005659	lsg1	99	55.864	ENSMODG00000019828	LSG1	99	55.864	Monodelphis_domestica
ENSHBUG00000005659	lsg1	100	63.609	MGP_CAROLIEiJ_G0020648	Lsg1	100	65.084	Mus_caroli
ENSHBUG00000005659	lsg1	100	63.308	ENSMUSG00000022538	Lsg1	100	64.482	Mus_musculus
ENSHBUG00000005659	lsg1	98	62.614	MGP_PahariEiJ_G0016352	Lsg1	100	63.927	Mus_pahari
ENSHBUG00000005659	lsg1	100	63.158	MGP_SPRETEiJ_G0021544	Lsg1	100	64.492	Mus_spretus
ENSHBUG00000005659	lsg1	100	63.691	ENSMPUG00000003734	LSG1	100	63.788	Mustela_putorius_furo
ENSHBUG00000005659	lsg1	100	63.855	ENSMLUG00000012548	LSG1	100	64.404	Myotis_lucifugus
ENSHBUG00000005659	lsg1	99	63.988	ENSNGAG00000021872	Lsg1	99	64.043	Nannospalax_galili
ENSHBUG00000005659	lsg1	99	64.134	ENSNLEG00000008293	LSG1	99	63.952	Nomascus_leucogenys
ENSHBUG00000005659	lsg1	68	68.041	ENSMEUG00000009041	-	84	68.041	Notamacropus_eugenii
ENSHBUG00000005659	lsg1	100	97.059	ENSONIG00000002635	lsg1	100	97.059	Oreochromis_niloticus
ENSHBUG00000005659	lsg1	95	66.879	ENSOANG00000012742	LSG1	99	66.720	Ornithorhynchus_anatinus
ENSHBUG00000005659	lsg1	99	64.448	ENSOCUG00000004817	LSG1	99	64.448	Oryctolagus_cuniculus
ENSHBUG00000005659	lsg1	98	78.981	ENSORLG00000007695	lsg1	100	79.407	Oryzias_latipes
ENSHBUG00000005659	lsg1	98	79.777	ENSORLG00020016286	lsg1	100	79.719	Oryzias_latipes_hni
ENSHBUG00000005659	lsg1	98	77.990	ENSORLG00015012025	lsg1	100	78.627	Oryzias_latipes_hsok
ENSHBUG00000005659	lsg1	98	78.219	ENSOMEG00000022379	lsg1	100	78.450	Oryzias_melastigma
ENSHBUG00000005659	lsg1	99	63.293	ENSOGAG00000003475	LSG1	99	62.908	Otolemur_garnettii
ENSHBUG00000005659	lsg1	100	64.608	ENSOARG00000020403	LSG1	100	63.855	Ovis_aries
ENSHBUG00000005659	lsg1	99	64.706	ENSPPAG00000029271	LSG1	99	64.103	Pan_paniscus
ENSHBUG00000005659	lsg1	100	63.056	ENSPPRG00000010281	LSG1	100	63.205	Panthera_pardus
ENSHBUG00000005659	lsg1	100	63.868	ENSPTIG00000010789	LSG1	100	64.018	Panthera_tigris_altaica
ENSHBUG00000005659	lsg1	99	64.555	ENSPTRG00000015760	LSG1	99	63.952	Pan_troglodytes
ENSHBUG00000005659	lsg1	99	63.284	ENSPANG00000018249	LSG1	99	61.991	Papio_anubis
ENSHBUG00000005659	lsg1	99	71.938	ENSPKIG00000002895	lsg1	99	72.798	Paramormyrops_kingsleyae
ENSHBUG00000005659	lsg1	96	60.796	ENSPSIG00000009821	LSG1	99	59.724	Pelodiscus_sinensis
ENSHBUG00000005659	lsg1	95	76.547	ENSPMGG00000000931	lsg1	100	76.547	Periophthalmus_magnuspinnatus
ENSHBUG00000005659	lsg1	99	63.804	ENSPEMG00000012082	-	99	63.126	Peromyscus_maniculatus_bairdii
ENSHBUG00000005659	lsg1	99	60.538	ENSPMAG00000007451	lsg1	99	59.940	Petromyzon_marinus
ENSHBUG00000005659	lsg1	98	66.667	ENSPCIG00000013890	LSG1	81	66.667	Phascolarctos_cinereus
ENSHBUG00000005659	lsg1	98	82.616	ENSPFOG00000021882	lsg1	100	82.737	Poecilia_formosa
ENSHBUG00000005659	lsg1	98	82.109	ENSPLAG00000019536	lsg1	100	81.931	Poecilia_latipinna
ENSHBUG00000005659	lsg1	98	81.558	ENSPMEG00000017281	lsg1	100	81.860	Poecilia_mexicana
ENSHBUG00000005659	lsg1	98	71.226	ENSPREG00000006048	lsg1	100	70.859	Poecilia_reticulata
ENSHBUG00000005659	lsg1	92	63.235	ENSPPYG00000014425	LSG1	100	62.582	Pongo_abelii
ENSHBUG00000005659	lsg1	89	72.000	ENSPCAG00000005511	LSG1	90	72.000	Procavia_capensis
ENSHBUG00000005659	lsg1	99	63.554	ENSPCOG00000012360	LSG1	99	63.333	Propithecus_coquereli
ENSHBUG00000005659	lsg1	100	98.457	ENSPNYG00000021994	lsg1	100	98.457	Pundamilia_nyererei
ENSHBUG00000005659	lsg1	100	75.926	ENSPNAG00000015533	lsg1	100	75.772	Pygocentrus_nattereri
ENSHBUG00000005659	lsg1	100	62.991	ENSRNOG00000001727	Lsg1	100	64.231	Rattus_norvegicus
ENSHBUG00000005659	lsg1	99	63.229	ENSRBIG00000029053	LSG1	99	63.293	Rhinopithecus_bieti
ENSHBUG00000005659	lsg1	99	63.229	ENSRROG00000037702	LSG1	99	63.293	Rhinopithecus_roxellana
ENSHBUG00000005659	lsg1	82	35.609	YGL099W	LSG1	70	54.438	Saccharomyces_cerevisiae
ENSHBUG00000005659	lsg1	99	65.046	ENSSBOG00000034938	LSG1	99	64.438	Saimiri_boliviensis_boliviensis
ENSHBUG00000005659	lsg1	78	61.450	ENSSHAG00000003487	LSG1	100	62.023	Sarcophilus_harrisii
ENSHBUG00000005659	lsg1	98	73.291	ENSSFOG00015008955	lsg1	100	73.717	Scleropages_formosus
ENSHBUG00000005659	lsg1	98	86.508	ENSSDUG00000004622	lsg1	100	86.470	Seriola_dumerili
ENSHBUG00000005659	lsg1	98	84.286	ENSSLDG00000010869	lsg1	100	84.292	Seriola_lalandi_dorsalis
ENSHBUG00000005659	lsg1	82	66.272	ENSSARG00000012981	LSG1	84	62.534	Sorex_araneus
ENSHBUG00000005659	lsg1	100	66.465	ENSSPUG00000016347	LSG1	100	66.465	Sphenodon_punctatus
ENSHBUG00000005659	lsg1	100	82.115	ENSSPAG00000005508	lsg1	100	82.737	Stegastes_partitus
ENSHBUG00000005659	lsg1	100	62.348	ENSSSCG00000011827	LSG1	100	62.500	Sus_scrofa
ENSHBUG00000005659	lsg1	89	61.409	ENSTGUG00000009068	LSG1	100	60.631	Taeniopygia_guttata
ENSHBUG00000005659	lsg1	98	76.630	ENSTRUG00000017380	lsg1	100	76.899	Takifugu_rubripes
ENSHBUG00000005659	lsg1	98	80.732	ENSTNIG00000015570	lsg1	100	81.056	Tetraodon_nigroviridis
ENSHBUG00000005659	lsg1	100	59.760	ENSTTRG00000000559	LSG1	100	59.009	Tursiops_truncatus
ENSHBUG00000005659	lsg1	100	62.879	ENSUAMG00000012454	LSG1	100	63.158	Ursus_americanus
ENSHBUG00000005659	lsg1	100	62.879	ENSUMAG00000000855	LSG1	100	63.158	Ursus_maritimus
ENSHBUG00000005659	lsg1	95	61.551	ENSVPAG00000012400	LSG1	100	61.234	Vicugna_pacos
ENSHBUG00000005659	lsg1	95	64.000	ENSVVUG00000008956	LSG1	99	62.064	Vulpes_vulpes
ENSHBUG00000005659	lsg1	100	67.023	ENSXETG00000003451	lsg1	100	67.328	Xenopus_tropicalis
ENSHBUG00000005659	lsg1	98	83.200	ENSXCOG00000003239	lsg1	100	83.463	Xiphophorus_couchianus
ENSHBUG00000005659	lsg1	98	81.464	ENSXMAG00000005536	lsg1	100	81.611	Xiphophorus_maculatus