EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000005828 (Gene tree)
Gene ID: 102306152
Gene Symbol: -
Alias: -
Full Name: AF4/FMR2 family member 1-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 19602 bases
Position: chrJH425339.1:3406393-3425994
Accession: 102306152
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000024427	AF-4	PF05110.13	0	1	2
ENSHBUP00000024427	AF-4	PF05110.13	0	2	2
ENSHBUP00000004510	AF-4	PF05110.13	7.6e-300	1	2
ENSHBUP00000004510	AF-4	PF05110.13	7.6e-300	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000008566	-	7015	XM_005917339	ENSHBUP00000024427	1129 (aa)	XP_005917401	UPI0003BD8ED1
ENSHBUT00000008586	-	6973	-	ENSHBUP00000004510	1115 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000005828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000005828's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000005828	-	79	35.909	ENSG00000172493	AFF1	97	36.296	Homo_sapiens
ENSHBUG00000005828	-	57	48.387	ENSG00000144218	AFF3	96	39.583	Homo_sapiens
ENSHBUG00000005828	-	100	63.851	ENSAPOG00000002994	-	100	64.358	Acanthochromis_polyacanthus
ENSHBUG00000005828	-	79	83.651	ENSACIG00000021066	-	99	83.651	Amphilophus_citrinellus
ENSHBUG00000005828	-	100	65.284	ENSAOCG00000020283	-	100	65.114	Amphiprion_ocellaris
ENSHBUG00000005828	-	100	65.059	ENSAPEG00000018794	-	100	64.890	Amphiprion_percula
ENSHBUG00000005828	-	100	61.480	ENSATEG00000015552	-	99	61.060	Anabas_testudineus
ENSHBUG00000005828	-	98	32.441	ENSAPLG00000004059	AFF1	72	38.306	Anas_platyrhynchos
ENSHBUG00000005828	-	63	36.250	ENSANAG00000017095	AFF1	72	35.455	Aotus_nancymaae
ENSHBUG00000005828	-	99	99.113	ENSACLG00000002905	-	99	99.113	Astatotilapia_calliptera
ENSHBUG00000005828	-	63	38.509	ENSBTAG00000018488	AFF1	72	35.347	Bos_taurus
ENSHBUG00000005828	-	63	36.977	ENSCJAG00000006047	AFF1	75	34.812	Callithrix_jacchus
ENSHBUG00000005828	-	74	35.412	ENSCAFG00000009476	AFF1	70	36.235	Canis_familiaris
ENSHBUG00000005828	-	61	38.390	ENSCHIG00000008450	AFF1	71	36.111	Capra_hircus
ENSHBUG00000005828	-	81	60.000	ENSCAPG00000006540	AFF1	64	60.000	Cavia_aperea
ENSHBUG00000005828	-	54	49.180	ENSCAPG00000012999	AFF3	65	50.000	Cavia_aperea
ENSHBUG00000005828	-	54	50.000	ENSCPOG00000006346	AFF3	54	66.667	Cavia_porcellus
ENSHBUG00000005828	-	76	35.560	ENSCATG00000039501	AFF1	72	35.682	Cercocebus_atys
ENSHBUG00000005828	-	57	48.333	ENSCLAG00000017100	AFF3	64	48.333	Chinchilla_lanigera
ENSHBUG00000005828	-	76	35.991	ENSCSAG00000004333	AFF1	72	35.794	Chlorocebus_sabaeus
ENSHBUG00000005828	-	70	33.686	ENSCPBG00000020831	AFF2	51	42.857	Chrysemys_picta_bellii
ENSHBUG00000005828	-	65	38.006	ENSCANG00000037514	AFF1	72	37.054	Colobus_angolensis_palliatus
ENSHBUG00000005828	-	57	49.180	ENSCGRG00001014566	Aff3	53	50.000	Cricetulus_griseus_chok1gshd
ENSHBUG00000005828	-	57	49.180	ENSCGRG00000003408	Aff3	61	50.000	Cricetulus_griseus_crigri
ENSHBUG00000005828	-	98	49.866	ENSCVAG00000015626	-	100	50.616	Cyprinodon_variegatus
ENSHBUG00000005828	-	59	38.462	ENSDARG00000052242	aff2	50	45.946	Danio_rerio
ENSHBUG00000005828	-	63	40.260	ENSETEG00000014905	AFF1	66	33.245	Echinops_telfairi
ENSHBUG00000005828	-	78	34.623	ENSEASG00005012760	AFF1	70	36.534	Equus_asinus_asinus
ENSHBUG00000005828	-	59	47.541	ENSECAG00000006249	AFF3	55	48.333	Equus_caballus
ENSHBUG00000005828	-	55	62.903	ENSECAG00000003619	AFF1	70	34.732	Equus_caballus
ENSHBUG00000005828	-	99	41.736	ENSELUG00000019953	-	99	41.941	Esox_lucius
ENSHBUG00000005828	-	71	35.366	ENSFCAG00000029806	AFF1	68	35.408	Felis_catus
ENSHBUG00000005828	-	78	46.580	ENSFHEG00000003521	-	100	46.464	Fundulus_heteroclitus
ENSHBUG00000005828	-	50	43.443	ENSGMOG00000008803	aff4	69	36.864	Gadus_morhua
ENSHBUG00000005828	-	54	45.000	ENSGALG00000009168	AFF2	63	32.917	Gallus_gallus
ENSHBUG00000005828	-	99	52.502	ENSGACG00000016333	-	99	58.933	Gasterosteus_aculeatus
ENSHBUG00000005828	-	79	36.054	ENSGGOG00000008497	AFF1	56	42.800	Gorilla_gorilla
ENSHBUG00000005828	-	81	61.667	ENSHGLG00000001384	AFF1	63	61.290	Heterocephalus_glaber_female
ENSHBUG00000005828	-	100	44.646	ENSHCOG00000000539	-	99	44.166	Hippocampus_comes
ENSHBUG00000005828	-	51	33.768	ENSIPUG00000015259	-	73	37.637	Ictalurus_punctatus
ENSHBUG00000005828	-	75	35.698	ENSSTOG00000006530	AFF1	70	35.731	Ictidomys_tridecemlineatus
ENSHBUG00000005828	-	57	50.000	ENSSTOG00000012140	AFF3	57	50.000	Ictidomys_tridecemlineatus
ENSHBUG00000005828	-	56	45.902	ENSJJAG00000013155	Aff3	61	46.774	Jaculus_jaculus
ENSHBUG00000005828	-	100	54.786	ENSKMAG00000013113	-	100	54.561	Kryptolebias_marmoratus
ENSHBUG00000005828	-	100	57.359	ENSLBEG00000016928	-	99	57.359	Labrus_bergylta
ENSHBUG00000005828	-	85	37.234	ENSLOCG00000004025	AFF1	68	45.708	Lepisosteus_oculatus
ENSHBUG00000005828	-	65	36.957	ENSMFAG00000037700	AFF1	72	35.682	Macaca_fascicularis
ENSHBUG00000005828	-	65	36.957	ENSMMUG00000014076	AFF1	86	34.545	Macaca_mulatta
ENSHBUG00000005828	-	65	37.695	ENSMNEG00000031536	AFF1	72	35.682	Macaca_nemestrina
ENSHBUG00000005828	-	65	38.318	ENSMLEG00000039099	AFF1	72	35.682	Mandrillus_leucophaeus
ENSHBUG00000005828	-	99	60.068	ENSMAMG00000016189	-	98	60.997	Mastacembelus_armatus
ENSHBUG00000005828	-	99	99.113	ENSMZEG00005020442	-	99	99.113	Maylandia_zebra
ENSHBUG00000005828	-	57	40.271	ENSMAUG00000010241	Aff1	67	34.755	Mesocricetus_auratus
ENSHBUG00000005828	-	100	58.705	ENSMALG00000002436	-	99	58.116	Monopterus_albus
ENSHBUG00000005828	-	55	47.541	MGP_CAROLIEiJ_G0014063	Aff3	53	48.333	Mus_caroli
ENSHBUG00000005828	-	57	47.541	ENSMUSG00000037138	Aff3	53	48.333	Mus_musculus
ENSHBUG00000005828	-	55	47.541	MGP_PahariEiJ_G0027310	Aff3	53	48.333	Mus_pahari
ENSHBUG00000005828	-	55	48.387	MGP_SPRETEiJ_G0014867	Aff3	53	48.333	Mus_spretus
ENSHBUG00000005828	-	61	37.864	ENSMPUG00000002270	AFF1	71	36.449	Mustela_putorius_furo
ENSHBUG00000005828	-	57	48.333	ENSNGAG00000002408	Aff3	53	48.333	Nannospalax_galili
ENSHBUG00000005828	-	100	86.880	ENSONIG00000007636	-	100	87.973	Oreochromis_niloticus
ENSHBUG00000005828	-	74	34.763	ENSOCUG00000002105	AFF1	67	36.725	Oryctolagus_cuniculus
ENSHBUG00000005828	-	70	59.756	ENSORLG00000006428	-	99	59.756	Oryzias_latipes
ENSHBUG00000005828	-	84	59.756	ENSORLG00020003991	-	99	59.756	Oryzias_latipes_hni
ENSHBUG00000005828	-	84	59.756	ENSORLG00015009287	-	99	59.756	Oryzias_latipes_hsok
ENSHBUG00000005828	-	84	61.798	ENSOMEG00000005799	-	100	61.798	Oryzias_melastigma
ENSHBUG00000005828	-	62	37.309	ENSOGAG00000009622	-	73	36.408	Otolemur_garnettii
ENSHBUG00000005828	-	79	36.117	ENSPPAG00000029196	AFF1	76	35.570	Pan_paniscus
ENSHBUG00000005828	-	71	35.366	ENSPPRG00000023590	AFF1	69	35.652	Panthera_pardus
ENSHBUG00000005828	-	71	35.366	ENSPTIG00000011838	AFF1	83	35.652	Panthera_tigris_altaica
ENSHBUG00000005828	-	79	36.117	ENSPTRG00000016255	AFF1	55	62.903	Pan_troglodytes
ENSHBUG00000005828	-	91	56.274	ENSPKIG00000007777	-	92	56.274	Paramormyrops_kingsleyae
ENSHBUG00000005828	-	56	46.552	ENSPKIG00000024325	AFF4	57	46.552	Paramormyrops_kingsleyae
ENSHBUG00000005828	-	57	48.333	ENSPEMG00000014802	Aff3	61	48.387	Peromyscus_maniculatus_bairdii
ENSHBUG00000005828	-	100	50.429	ENSPFOG00000004581	-	100	50.214	Poecilia_formosa
ENSHBUG00000005828	-	95	49.140	ENSPLAG00000012910	-	100	48.917	Poecilia_latipinna
ENSHBUG00000005828	-	65	47.638	ENSPMEG00000020100	-	93	47.196	Poecilia_mexicana
ENSHBUG00000005828	-	100	51.372	ENSPREG00000003514	-	100	51.286	Poecilia_reticulata
ENSHBUG00000005828	-	75	36.569	ENSPPYG00000014910	AFF1	71	35.616	Pongo_abelii
ENSHBUG00000005828	-	82	47.368	ENSPVAG00000014455	AFF1	51	48.352	Pteropus_vampyrus
ENSHBUG00000005828	-	55	47.541	ENSRNOG00000018830	Aff3	50	48.333	Rattus_norvegicus
ENSHBUG00000005828	-	65	36.646	ENSRBIG00000032242	AFF1	72	36.667	Rhinopithecus_bieti
ENSHBUG00000005828	-	65	36.646	ENSRROG00000045716	AFF1	72	36.667	Rhinopithecus_roxellana
ENSHBUG00000005828	-	63	36.562	ENSSBOG00000035401	AFF1	56	43.083	Saimiri_boliviensis_boliviensis
ENSHBUG00000005828	-	99	58.122	ENSSMAG00000007062	-	98	58.291	Scophthalmus_maximus
ENSHBUG00000005828	-	59	59.327	ENSSDUG00000023775	-	97	60.112	Seriola_dumerili
ENSHBUG00000005828	-	100	63.629	ENSSLDG00000006836	-	99	63.963	Seriola_lalandi_dorsalis
ENSHBUG00000005828	-	97	66.289	ENSSPAG00000003972	-	97	66.376	Stegastes_partitus
ENSHBUG00000005828	-	99	50.378	ENSTRUG00000014005	-	99	50.714	Takifugu_rubripes
ENSHBUG00000005828	-	99	42.812	ENSTNIG00000007537	-	69	38.902	Tetraodon_nigroviridis
ENSHBUG00000005828	-	76	33.943	ENSUMAG00000025433	AFF1	80	34.141	Ursus_maritimus
ENSHBUG00000005828	-	72	36.047	ENSVVUG00000009263	AFF1	69	36.190	Vulpes_vulpes
ENSHBUG00000005828	-	55	42.085	ENSXETG00000019630	aff2	50	41.634	Xenopus_tropicalis
ENSHBUG00000005828	-	100	51.071	ENSXMAG00000004657	-	100	51.157	Xiphophorus_maculatus