EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000005888 (Gene tree)
Gene ID: 102292490
Gene Symbol: RBPMS
Alias: HERMES
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 27658 bases
Position: chrJH425445.1:1464548-1492205
Accession: 102292490
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000004576	RRM_1	PF00076.22	3.1e-11	1	1
ENSHBUP00000004594	RRM_1	PF00076.22	5.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000008470	RBPMS-201	1107	XM_005930887	ENSHBUP00000004576	194 (aa)	XP_005930949	UPI00022B0AA7
ENSHBUT00000008475	RBPMS-202	2595	-	ENSHBUP00000004594	255 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000005888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000005888's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000005888	RBPMS	99	67.000	ENSHBUG00000009135	rbpms2b	74	69.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000005888	RBPMS	99	85.052	ENSG00000157110	RBPMS	99	85.052	Homo_sapiens
ENSHBUG00000005888	RBPMS	100	98.454	ENSAPOG00000022304	RBPMS	100	98.454	Acanthochromis_polyacanthus
ENSHBUG00000005888	RBPMS	84	85.455	ENSAMEG00000001522	RBPMS	75	85.976	Ailuropoda_melanoleuca
ENSHBUG00000005888	RBPMS	62	95.000	ENSACIG00000011395	RBPMS	77	82.639	Amphilophus_citrinellus
ENSHBUG00000005888	RBPMS	100	98.454	ENSAOCG00000007731	RBPMS	100	98.454	Amphiprion_ocellaris
ENSHBUG00000005888	RBPMS	100	98.454	ENSAPEG00000023543	RBPMS	100	98.454	Amphiprion_percula
ENSHBUG00000005888	RBPMS	100	98.454	ENSATEG00000018184	RBPMS	100	98.454	Anabas_testudineus
ENSHBUG00000005888	RBPMS	100	83.673	ENSACAG00000003012	RBPMS	100	82.143	Anolis_carolinensis
ENSHBUG00000005888	RBPMS	99	85.052	ENSANAG00000028150	RBPMS	99	85.052	Aotus_nancymaae
ENSHBUG00000005888	RBPMS	100	100.000	ENSACLG00000002926	RBPMS	100	100.000	Astatotilapia_calliptera
ENSHBUG00000005888	RBPMS	99	92.708	ENSAMXG00000033491	rbpms	99	92.708	Astyanax_mexicanus
ENSHBUG00000005888	RBPMS	99	84.021	ENSBTAG00000033727	RBPMS	81	84.746	Bos_taurus
ENSHBUG00000005888	RBPMS	99	85.052	ENSCJAG00000012366	RBPMS	99	85.052	Callithrix_jacchus
ENSHBUG00000005888	RBPMS	90	85.876	ENSCAFG00000006503	RBPMS	81	85.876	Canis_familiaris
ENSHBUG00000005888	RBPMS	90	85.876	ENSCAFG00020001031	RBPMS	81	85.876	Canis_lupus_dingo
ENSHBUG00000005888	RBPMS	99	78.462	ENSCHIG00000027156	RBPMS	100	78.680	Capra_hircus
ENSHBUG00000005888	RBPMS	57	90.000	ENSTSYG00000013982	RBPMS	83	90.000	Carlito_syrichta
ENSHBUG00000005888	RBPMS	99	84.536	ENSCPOG00000038597	RBPMS	99	84.536	Cavia_porcellus
ENSHBUG00000005888	RBPMS	99	85.052	ENSCCAG00000033226	RBPMS	99	85.052	Cebus_capucinus
ENSHBUG00000005888	RBPMS	99	85.052	ENSCATG00000036486	RBPMS	99	85.052	Cercocebus_atys
ENSHBUG00000005888	RBPMS	89	87.931	ENSCLAG00000001518	RBPMS	100	87.931	Chinchilla_lanigera
ENSHBUG00000005888	RBPMS	90	85.876	ENSCSAG00000015838	RBPMS	81	85.876	Chlorocebus_sabaeus
ENSHBUG00000005888	RBPMS	79	89.032	ENSCHOG00000008745	RBPMS	79	89.032	Choloepus_hoffmanni
ENSHBUG00000005888	RBPMS	100	82.051	ENSCPBG00000013437	RBPMS	100	82.051	Chrysemys_picta_bellii
ENSHBUG00000005888	RBPMS	89	87.931	ENSCANG00000034997	RBPMS	100	87.931	Colobus_angolensis_palliatus
ENSHBUG00000005888	RBPMS	99	80.000	ENSCGRG00001002814	Rbpms	99	84.103	Cricetulus_griseus_chok1gshd
ENSHBUG00000005888	RBPMS	89	82.857	ENSCGRG00000006095	Rbpms	100	87.429	Cricetulus_griseus_crigri
ENSHBUG00000005888	RBPMS	100	97.423	ENSCSEG00000002777	rbpms	100	97.423	Cynoglossus_semilaevis
ENSHBUG00000005888	RBPMS	100	98.454	ENSCVAG00000013975	RBPMS	100	98.454	Cyprinodon_variegatus
ENSHBUG00000005888	RBPMS	87	71.598	ENSDARG00000099396	rbpms	100	71.598	Danio_rerio
ENSHBUG00000005888	RBPMS	90	84.746	ENSDNOG00000008126	RBPMS	81	84.746	Dasypus_novemcinctus
ENSHBUG00000005888	RBPMS	90	86.441	ENSETEG00000017582	RBPMS	81	86.441	Echinops_telfairi
ENSHBUG00000005888	RBPMS	79	89.032	ENSEASG00005016962	RBPMS	78	89.610	Equus_asinus_asinus
ENSHBUG00000005888	RBPMS	90	85.311	ENSECAG00000020735	RBPMS	78	89.610	Equus_caballus
ENSHBUG00000005888	RBPMS	100	93.299	ENSELUG00000009787	rbpms	100	93.299	Esox_lucius
ENSHBUG00000005888	RBPMS	88	52.907	ENSFCAG00000022292	-	95	46.860	Felis_catus
ENSHBUG00000005888	RBPMS	99	84.536	ENSFCAG00000025639	-	99	84.536	Felis_catus
ENSHBUG00000005888	RBPMS	89	87.931	ENSFDAG00000012078	RBPMS	100	87.931	Fukomys_damarensis
ENSHBUG00000005888	RBPMS	100	97.938	ENSFHEG00000000618	rbpms	100	97.938	Fundulus_heteroclitus
ENSHBUG00000005888	RBPMS	77	62.667	ENSGMOG00000009646	-	100	62.667	Gadus_morhua
ENSHBUG00000005888	RBPMS	100	98.969	ENSGAFG00000016566	RBPMS	100	98.969	Gambusia_affinis
ENSHBUG00000005888	RBPMS	100	87.629	ENSGACG00000019471	rbpms	100	87.629	Gasterosteus_aculeatus
ENSHBUG00000005888	RBPMS	59	86.087	ENSGAGG00000023634	RBPMS	53	83.740	Gopherus_agassizii
ENSHBUG00000005888	RBPMS	99	85.052	ENSHGLG00000002303	RBPMS	99	85.052	Heterocephalus_glaber_female
ENSHBUG00000005888	RBPMS	89	87.931	ENSHGLG00100008787	RBPMS	100	87.931	Heterocephalus_glaber_male
ENSHBUG00000005888	RBPMS	98	97.382	ENSHCOG00000005774	rbpms	99	97.382	Hippocampus_comes
ENSHBUG00000005888	RBPMS	97	89.418	ENSIPUG00000012459	RBPMS	98	89.418	Ictalurus_punctatus
ENSHBUG00000005888	RBPMS	99	84.536	ENSSTOG00000026546	RBPMS	99	84.536	Ictidomys_tridecemlineatus
ENSHBUG00000005888	RBPMS	99	85.052	ENSJJAG00000014024	Rbpms	99	85.052	Jaculus_jaculus
ENSHBUG00000005888	RBPMS	89	78.286	ENSKMAG00000006377	RBPMS	88	81.143	Kryptolebias_marmoratus
ENSHBUG00000005888	RBPMS	100	98.454	ENSLBEG00000027989	RBPMS	100	98.454	Labrus_bergylta
ENSHBUG00000005888	RBPMS	90	92.000	ENSLOCG00000013199	RBPMS	96	92.000	Lepisosteus_oculatus
ENSHBUG00000005888	RBPMS	90	85.876	ENSLAFG00000000209	RBPMS	81	85.876	Loxodonta_africana
ENSHBUG00000005888	RBPMS	99	85.052	ENSMFAG00000036911	RBPMS	99	85.052	Macaca_fascicularis
ENSHBUG00000005888	RBPMS	99	85.052	ENSMMUG00000000458	RBPMS	99	85.052	Macaca_mulatta
ENSHBUG00000005888	RBPMS	99	85.052	ENSMNEG00000043805	RBPMS	99	85.052	Macaca_nemestrina
ENSHBUG00000005888	RBPMS	89	87.931	ENSMLEG00000015635	RBPMS	100	87.931	Mandrillus_leucophaeus
ENSHBUG00000005888	RBPMS	95	76.757	ENSMAMG00000004604	RBPMS	94	76.757	Mastacembelus_armatus
ENSHBUG00000005888	RBPMS	100	100.000	ENSMZEG00005000698	RBPMS	100	100.000	Maylandia_zebra
ENSHBUG00000005888	RBPMS	90	85.143	ENSMGAG00000005088	RBPMS	90	85.143	Meleagris_gallopavo
ENSHBUG00000005888	RBPMS	99	80.000	ENSMAUG00000018892	Rbpms	99	84.103	Mesocricetus_auratus
ENSHBUG00000005888	RBPMS	99	80.412	ENSMICG00000001295	RBPMS	99	84.021	Microcebus_murinus
ENSHBUG00000005888	RBPMS	99	80.000	ENSMOCG00000014009	Rbpms	99	84.103	Microtus_ochrogaster
ENSHBUG00000005888	RBPMS	82	95.597	ENSMMOG00000012036	RBPMS	84	82.673	Mola_mola
ENSHBUG00000005888	RBPMS	97	84.656	ENSMODG00000019006	RBPMS	89	84.656	Monodelphis_domestica
ENSHBUG00000005888	RBPMS	100	96.392	ENSMALG00000003261	RBPMS	100	96.392	Monopterus_albus
ENSHBUG00000005888	RBPMS	99	79.487	MGP_CAROLIEiJ_G0030970	Rbpms	99	83.590	Mus_caroli
ENSHBUG00000005888	RBPMS	99	79.487	ENSMUSG00000031586	Rbpms	99	83.590	Mus_musculus
ENSHBUG00000005888	RBPMS	99	79.487	MGP_PahariEiJ_G0021439	Rbpms	99	83.590	Mus_pahari
ENSHBUG00000005888	RBPMS	99	79.487	MGP_SPRETEiJ_G0032087	Rbpms	99	83.590	Mus_spretus
ENSHBUG00000005888	RBPMS	84	85.455	ENSMPUG00000011314	RBPMS	75	85.976	Mustela_putorius_furo
ENSHBUG00000005888	RBPMS	100	84.694	ENSMLUG00000009391	RBPMS	100	86.076	Myotis_lucifugus
ENSHBUG00000005888	RBPMS	90	85.876	ENSNGAG00000011141	Rbpms	81	85.876	Nannospalax_galili
ENSHBUG00000005888	RBPMS	90	99.425	ENSNBRG00000003313	RBPMS	97	99.425	Neolamprologus_brichardi
ENSHBUG00000005888	RBPMS	99	84.536	ENSNLEG00000036183	-	99	84.536	Nomascus_leucogenys
ENSHBUG00000005888	RBPMS	68	85.606	ENSOPRG00000013151	RBPMS	60	85.606	Ochotona_princeps
ENSHBUG00000005888	RBPMS	99	85.052	ENSODEG00000006700	RBPMS	99	85.052	Octodon_degus
ENSHBUG00000005888	RBPMS	90	99.425	ENSONIG00000007546	RBPMS	100	99.425	Oreochromis_niloticus
ENSHBUG00000005888	RBPMS	90	85.876	ENSOCUG00000008572	RBPMS	81	85.876	Oryctolagus_cuniculus
ENSHBUG00000005888	RBPMS	100	97.938	ENSORLG00000004135	-	100	97.938	Oryzias_latipes
ENSHBUG00000005888	RBPMS	100	98.454	ENSORLG00020016179	RBPMS	100	98.454	Oryzias_latipes_hni
ENSHBUG00000005888	RBPMS	100	98.454	ENSORLG00015013770	RBPMS	100	98.454	Oryzias_latipes_hsok
ENSHBUG00000005888	RBPMS	100	97.938	ENSOMEG00000005044	RBPMS	100	97.938	Oryzias_melastigma
ENSHBUG00000005888	RBPMS	92	84.530	ENSOGAG00000030298	RBPMS	82	83.696	Otolemur_garnettii
ENSHBUG00000005888	RBPMS	65	83.333	ENSOARG00000010366	RBPMS	89	84.252	Ovis_aries
ENSHBUG00000005888	RBPMS	89	87.931	ENSPPAG00000033108	RBPMS	100	87.931	Pan_paniscus
ENSHBUG00000005888	RBPMS	99	84.536	ENSPPRG00000004836	RBPMS	99	84.536	Panthera_pardus
ENSHBUG00000005888	RBPMS	89	87.931	ENSPTIG00000015964	RBPMS	89	87.931	Panthera_tigris_altaica
ENSHBUG00000005888	RBPMS	99	85.052	ENSPTRG00000020135	RBPMS	99	85.052	Pan_troglodytes
ENSHBUG00000005888	RBPMS	99	85.052	ENSPANG00000008143	RBPMS	99	85.052	Papio_anubis
ENSHBUG00000005888	RBPMS	100	90.722	ENSPKIG00000000535	-	100	90.722	Paramormyrops_kingsleyae
ENSHBUG00000005888	RBPMS	97	88.830	ENSPKIG00000004836	rbpms	99	88.830	Paramormyrops_kingsleyae
ENSHBUG00000005888	RBPMS	89	86.207	ENSPSIG00000006136	RBPMS	99	86.207	Pelodiscus_sinensis
ENSHBUG00000005888	RBPMS	81	97.468	ENSPMGG00000018012	RBPMS	85	87.701	Periophthalmus_magnuspinnatus
ENSHBUG00000005888	RBPMS	99	80.102	ENSPEMG00000021130	Rbpms	99	83.673	Peromyscus_maniculatus_bairdii
ENSHBUG00000005888	RBPMS	90	86.932	ENSPCIG00000019298	-	71	83.041	Phascolarctos_cinereus
ENSHBUG00000005888	RBPMS	100	98.969	ENSPFOG00000017158	RBPMS	100	98.969	Poecilia_formosa
ENSHBUG00000005888	RBPMS	100	98.969	ENSPLAG00000010767	RBPMS	100	98.969	Poecilia_latipinna
ENSHBUG00000005888	RBPMS	100	98.969	ENSPMEG00000009788	RBPMS	100	98.969	Poecilia_mexicana
ENSHBUG00000005888	RBPMS	100	98.969	ENSPREG00000016959	RBPMS	100	98.969	Poecilia_reticulata
ENSHBUG00000005888	RBPMS	90	85.876	ENSPPYG00000018487	RBPMS	81	85.876	Pongo_abelii
ENSHBUG00000005888	RBPMS	57	90.000	ENSPCAG00000013493	-	100	90.000	Procavia_capensis
ENSHBUG00000005888	RBPMS	92	70.166	ENSPCOG00000015948	RBPMS	86	70.857	Propithecus_coquereli
ENSHBUG00000005888	RBPMS	90	85.311	ENSPVAG00000001661	RBPMS	81	85.311	Pteropus_vampyrus
ENSHBUG00000005888	RBPMS	100	100.000	ENSPNYG00000001172	RBPMS	100	100.000	Pundamilia_nyererei
ENSHBUG00000005888	RBPMS	99	95.833	ENSPNAG00000029160	RBPMS	99	95.833	Pygocentrus_nattereri
ENSHBUG00000005888	RBPMS	92	79.121	ENSRNOG00000013328	Rbpms	95	77.612	Rattus_norvegicus
ENSHBUG00000005888	RBPMS	89	87.931	ENSRBIG00000038218	RBPMS	100	87.931	Rhinopithecus_bieti
ENSHBUG00000005888	RBPMS	99	85.052	ENSRROG00000042518	RBPMS	99	85.052	Rhinopithecus_roxellana
ENSHBUG00000005888	RBPMS	99	84.536	ENSSBOG00000026670	RBPMS	99	84.536	Saimiri_boliviensis_boliviensis
ENSHBUG00000005888	RBPMS	91	86.517	ENSSHAG00000010114	RBPMS	92	86.517	Sarcophilus_harrisii
ENSHBUG00000005888	RBPMS	100	90.206	ENSSFOG00015000417	rbpms	100	90.206	Scleropages_formosus
ENSHBUG00000005888	RBPMS	90	89.655	ENSSFOG00015017481	-	99	86.702	Scleropages_formosus
ENSHBUG00000005888	RBPMS	100	96.907	ENSSMAG00000010871	rbpms	100	96.907	Scophthalmus_maximus
ENSHBUG00000005888	RBPMS	100	98.969	ENSSDUG00000010894	RBPMS	100	98.969	Seriola_dumerili
ENSHBUG00000005888	RBPMS	100	98.969	ENSSLDG00000012916	RBPMS	100	98.969	Seriola_lalandi_dorsalis
ENSHBUG00000005888	RBPMS	90	81.356	ENSSARG00000000274	RBPMS	81	81.356	Sorex_araneus
ENSHBUG00000005888	RBPMS	94	83.152	ENSSPUG00000017525	RBPMS	70	83.152	Sphenodon_punctatus
ENSHBUG00000005888	RBPMS	89	77.457	ENSSPAG00000004777	rbpms	82	94.815	Stegastes_partitus
ENSHBUG00000005888	RBPMS	99	84.536	ENSSSCG00000015846	RBPMS	99	84.536	Sus_scrofa
ENSHBUG00000005888	RBPMS	97	82.540	ENSTGUG00000001776	RBPMS	99	82.540	Taeniopygia_guttata
ENSHBUG00000005888	RBPMS	100	96.392	ENSTRUG00000000041	RBPMS	100	96.392	Takifugu_rubripes
ENSHBUG00000005888	RBPMS	90	85.227	ENSTTRG00000012451	RBPMS	81	85.227	Tursiops_truncatus
ENSHBUG00000005888	RBPMS	60	86.207	ENSUAMG00000026353	RBPMS	76	86.207	Ursus_americanus
ENSHBUG00000005888	RBPMS	85	86.667	ENSUMAG00000007347	RBPMS	76	88.462	Ursus_maritimus
ENSHBUG00000005888	RBPMS	79	89.032	ENSVPAG00000010991	RBPMS	79	89.032	Vicugna_pacos
ENSHBUG00000005888	RBPMS	99	85.052	ENSVVUG00000019770	RBPMS	99	85.052	Vulpes_vulpes
ENSHBUG00000005888	RBPMS	89	87.931	ENSXETG00000011290	rbpms	100	87.931	Xenopus_tropicalis
ENSHBUG00000005888	RBPMS	90	93.103	ENSXCOG00000002436	RBPMS	90	93.103	Xiphophorus_couchianus
ENSHBUG00000005888	RBPMS	100	98.969	ENSXMAG00000027637	RBPMS	100	98.969	Xiphophorus_maculatus