EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000005894 (Gene tree)
Gene ID: 102293445
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 8263 bases
Position: chrJH425721.1:41815-50077
Accession: 102293445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000024484	Exo_endo_phos	PF03372.23	3.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000008472	-	6479	XM_005944077	ENSHBUP00000024484	309 (aa)	XP_005944139	UPI0003BD8D11

Gene Model

Click here to download ENSHBUG00000005894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000005894's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000005894	apex1	99	66.456	ENSG00000100823	APEX1	99	66.139	Homo_sapiens
ENSHBUG00000005894	apex1	100	88.673	ENSAPOG00000017002	apex1	100	88.673	Acanthochromis_polyacanthus
ENSHBUG00000005894	apex1	99	65.506	ENSAMEG00000005418	APEX1	99	65.506	Ailuropoda_melanoleuca
ENSHBUG00000005894	apex1	90	94.224	ENSACIG00000010653	apex1	93	94.182	Amphilophus_citrinellus
ENSHBUG00000005894	apex1	100	88.673	ENSAOCG00000009649	apex1	100	88.673	Amphiprion_ocellaris
ENSHBUG00000005894	apex1	100	88.997	ENSAPEG00000021453	apex1	100	88.997	Amphiprion_percula
ENSHBUG00000005894	apex1	99	91.909	ENSATEG00000002883	apex1	97	91.909	Anabas_testudineus
ENSHBUG00000005894	apex1	99	70.159	ENSACAG00000008099	APEX1	87	74.545	Anolis_carolinensis
ENSHBUG00000005894	apex1	99	67.089	ENSANAG00000030117	APEX1	99	66.456	Aotus_nancymaae
ENSHBUG00000005894	apex1	100	99.032	ENSACLG00000018441	apex1	100	99.032	Astatotilapia_calliptera
ENSHBUG00000005894	apex1	99	87.419	ENSAMXG00000034699	apex1	99	86.452	Astyanax_mexicanus
ENSHBUG00000005894	apex1	99	65.190	ENSBTAG00000002745	APEX1	87	69.928	Bos_taurus
ENSHBUG00000005894	apex1	92	42.857	WBGene00001372	exo-3	92	44.569	Caenorhabditis_elegans
ENSHBUG00000005894	apex1	99	66.772	ENSCJAG00000009726	APEX1	99	66.456	Callithrix_jacchus
ENSHBUG00000005894	apex1	99	66.772	ENSCAFG00000032033	APEX1	99	66.456	Canis_familiaris
ENSHBUG00000005894	apex1	99	66.772	ENSCAFG00020014377	-	99	66.456	Canis_lupus_dingo
ENSHBUG00000005894	apex1	53	60.588	ENSCAFG00020023002	-	94	60.000	Canis_lupus_dingo
ENSHBUG00000005894	apex1	99	65.190	ENSCHIG00000007298	-	87	69.928	Capra_hircus
ENSHBUG00000005894	apex1	87	56.827	ENSCHIG00000014537	-	86	56.827	Capra_hircus
ENSHBUG00000005894	apex1	99	64.873	ENSTSYG00000034813	APEX1	99	64.241	Carlito_syrichta
ENSHBUG00000005894	apex1	88	65.693	ENSCAPG00000016235	APEX1	91	72.034	Cavia_aperea
ENSHBUG00000005894	apex1	99	67.405	ENSCPOG00000030909	APEX1	99	66.772	Cavia_porcellus
ENSHBUG00000005894	apex1	99	57.911	ENSCCAG00000031931	-	99	57.595	Cebus_capucinus
ENSHBUG00000005894	apex1	99	66.772	ENSCCAG00000033056	-	99	66.456	Cebus_capucinus
ENSHBUG00000005894	apex1	99	67.089	ENSCATG00000015580	APEX1	99	65.823	Cercocebus_atys
ENSHBUG00000005894	apex1	99	66.456	ENSCLAG00000001002	APEX1	99	65.823	Chinchilla_lanigera
ENSHBUG00000005894	apex1	99	67.405	ENSCSAG00000016670	-	99	66.139	Chlorocebus_sabaeus
ENSHBUG00000005894	apex1	99	67.405	ENSCSAG00000016685	-	99	66.139	Chlorocebus_sabaeus
ENSHBUG00000005894	apex1	99	70.570	ENSCPBG00000009567	APEX1	99	70.886	Chrysemys_picta_bellii
ENSHBUG00000005894	apex1	97	55.556	ENSCING00000008137	-	85	60.300	Ciona_intestinalis
ENSHBUG00000005894	apex1	100	48.418	ENSCSAVG00000007144	-	100	54.651	Ciona_savignyi
ENSHBUG00000005894	apex1	99	66.772	ENSCANG00000030726	APEX1	99	66.456	Colobus_angolensis_palliatus
ENSHBUG00000005894	apex1	99	65.506	ENSCGRG00001017046	Apex1	99	65.079	Cricetulus_griseus_chok1gshd
ENSHBUG00000005894	apex1	99	65.506	ENSCGRG00000008984	Apex1	99	65.079	Cricetulus_griseus_crigri
ENSHBUG00000005894	apex1	100	88.710	ENSCSEG00000017499	apex1	99	88.710	Cynoglossus_semilaevis
ENSHBUG00000005894	apex1	100	91.613	ENSCVAG00000022075	apex1	100	91.613	Cyprinodon_variegatus
ENSHBUG00000005894	apex1	99	85.390	ENSDARG00000045843	apex1	99	85.390	Danio_rerio
ENSHBUG00000005894	apex1	99	62.975	ENSDNOG00000042234	APEX1	94	62.342	Dasypus_novemcinctus
ENSHBUG00000005894	apex1	99	65.190	ENSDORG00000001616	Apex1	87	70.290	Dipodomys_ordii
ENSHBUG00000005894	apex1	99	66.139	ENSETEG00000004855	-	99	65.823	Echinops_telfairi
ENSHBUG00000005894	apex1	77	60.084	ENSEBUG00000000622	-	92	60.084	Eptatretus_burgeri
ENSHBUG00000005894	apex1	99	66.139	ENSEASG00005017489	APEX1	73	65.506	Equus_asinus_asinus
ENSHBUG00000005894	apex1	99	66.139	ENSECAG00000022325	APEX1	81	65.506	Equus_caballus
ENSHBUG00000005894	apex1	87	70.260	ENSEEUG00000012569	APEX1	92	70.301	Erinaceus_europaeus
ENSHBUG00000005894	apex1	99	82.258	ENSELUG00000021706	apex1	99	81.613	Esox_lucius
ENSHBUG00000005894	apex1	99	66.456	ENSFCAG00000030869	APEX1	99	66.139	Felis_catus
ENSHBUG00000005894	apex1	99	66.772	ENSFDAG00000006120	APEX1	99	66.139	Fukomys_damarensis
ENSHBUG00000005894	apex1	100	90.968	ENSFHEG00000009031	apex1	83	90.968	Fundulus_heteroclitus
ENSHBUG00000005894	apex1	100	77.814	ENSGMOG00000007943	apex1	99	75.563	Gadus_morhua
ENSHBUG00000005894	apex1	100	91.613	ENSGAFG00000005311	apex1	100	91.613	Gambusia_affinis
ENSHBUG00000005894	apex1	100	89.032	ENSGACG00000019497	apex1	99	90.977	Gasterosteus_aculeatus
ENSHBUG00000005894	apex1	99	70.570	ENSGAGG00000014999	APEX1	99	70.886	Gopherus_agassizii
ENSHBUG00000005894	apex1	99	66.139	ENSGGOG00000002128	APEX1	99	65.823	Gorilla_gorilla
ENSHBUG00000005894	apex1	99	67.405	ENSHGLG00000002848	APEX1	99	66.139	Heterocephalus_glaber_female
ENSHBUG00000005894	apex1	99	67.405	ENSHGLG00100017878	APEX1	99	66.139	Heterocephalus_glaber_male
ENSHBUG00000005894	apex1	100	87.138	ENSHCOG00000009961	apex1	100	84.244	Hippocampus_comes
ENSHBUG00000005894	apex1	99	85.113	ENSIPUG00000005799	apex1	99	82.201	Ictalurus_punctatus
ENSHBUG00000005894	apex1	99	67.089	ENSSTOG00000010096	APEX1	99	66.772	Ictidomys_tridecemlineatus
ENSHBUG00000005894	apex1	99	64.557	ENSJJAG00000012067	-	87	69.928	Jaculus_jaculus
ENSHBUG00000005894	apex1	99	58.228	ENSJJAG00000003660	-	99	58.228	Jaculus_jaculus
ENSHBUG00000005894	apex1	90	61.649	ENSJJAG00000020465	-	89	61.594	Jaculus_jaculus
ENSHBUG00000005894	apex1	100	90.968	ENSKMAG00000021171	apex1	100	90.968	Kryptolebias_marmoratus
ENSHBUG00000005894	apex1	100	89.032	ENSLBEG00000010248	apex1	100	89.032	Labrus_bergylta
ENSHBUG00000005894	apex1	99	72.843	ENSLACG00000008617	APEX1	87	78.467	Latimeria_chalumnae
ENSHBUG00000005894	apex1	99	78.594	ENSLOCG00000015516	apex1	99	77.955	Lepisosteus_oculatus
ENSHBUG00000005894	apex1	90	71.326	ENSLAFG00000021872	APEX1	86	71.636	Loxodonta_africana
ENSHBUG00000005894	apex1	99	66.139	ENSMFAG00000002565	APEX1	99	66.139	Macaca_fascicularis
ENSHBUG00000005894	apex1	99	66.139	ENSMMUG00000048039	APEX1	99	66.139	Macaca_mulatta
ENSHBUG00000005894	apex1	99	66.139	ENSMNEG00000036944	APEX1	99	66.139	Macaca_nemestrina
ENSHBUG00000005894	apex1	99	67.089	ENSMLEG00000042125	APEX1	99	65.823	Mandrillus_leucophaeus
ENSHBUG00000005894	apex1	100	90.968	ENSMAMG00000023526	apex1	100	90.968	Mastacembelus_armatus
ENSHBUG00000005894	apex1	100	99.032	ENSMZEG00005014187	apex1	100	99.032	Maylandia_zebra
ENSHBUG00000005894	apex1	99	65.714	ENSMAUG00000013994	Apex1	87	69.565	Mesocricetus_auratus
ENSHBUG00000005894	apex1	99	65.190	ENSMICG00000043554	APEX1	99	64.557	Microcebus_murinus
ENSHBUG00000005894	apex1	99	66.456	ENSMOCG00000013721	Apex1	99	66.032	Microtus_ochrogaster
ENSHBUG00000005894	apex1	100	87.460	ENSMMOG00000010031	apex1	97	85.209	Mola_mola
ENSHBUG00000005894	apex1	91	68.198	ENSMODG00000007125	APEX1	86	69.455	Monodelphis_domestica
ENSHBUG00000005894	apex1	91	84.286	ENSMALG00000011699	apex1	74	84.000	Monopterus_albus
ENSHBUG00000005894	apex1	99	67.619	MGP_CAROLIEiJ_G0019209	Apex1	99	66.879	Mus_caroli
ENSHBUG00000005894	apex1	99	67.405	ENSMUSG00000035960	Apex1	99	66.667	Mus_musculus
ENSHBUG00000005894	apex1	99	66.984	MGP_PahariEiJ_G0030232	Apex1	99	66.984	Mus_pahari
ENSHBUG00000005894	apex1	99	67.405	MGP_SPRETEiJ_G0020101	Apex1	99	66.667	Mus_spretus
ENSHBUG00000005894	apex1	99	65.409	ENSMLUG00000028957	APEX1	99	64.780	Myotis_lucifugus
ENSHBUG00000005894	apex1	87	53.791	ENSNGAG00000021748	-	85	53.430	Nannospalax_galili
ENSHBUG00000005894	apex1	99	66.772	ENSNGAG00000002725	-	99	65.506	Nannospalax_galili
ENSHBUG00000005894	apex1	100	99.032	ENSNBRG00000005334	apex1	91	99.032	Neolamprologus_brichardi
ENSHBUG00000005894	apex1	99	66.559	ENSNLEG00000010839	APEX1	99	65.823	Nomascus_leucogenys
ENSHBUG00000005894	apex1	99	65.385	ENSMEUG00000014519	APEX1	92	64.078	Notamacropus_eugenii
ENSHBUG00000005894	apex1	99	66.032	ENSOPRG00000014029	APEX1	99	65.714	Ochotona_princeps
ENSHBUG00000005894	apex1	99	66.456	ENSODEG00000001703	-	99	66.139	Octodon_degus
ENSHBUG00000005894	apex1	97	54.000	ENSODEG00000004777	-	83	58.730	Octodon_degus
ENSHBUG00000005894	apex1	99	51.553	ENSODEG00000006583	-	86	54.965	Octodon_degus
ENSHBUG00000005894	apex1	100	99.032	ENSONIG00000012089	apex1	100	99.032	Oreochromis_niloticus
ENSHBUG00000005894	apex1	89	69.818	ENSOANG00000008836	APEX1	68	69.818	Ornithorhynchus_anatinus
ENSHBUG00000005894	apex1	99	67.089	ENSOCUG00000005022	APEX1	99	66.456	Oryctolagus_cuniculus
ENSHBUG00000005894	apex1	100	89.389	ENSORLG00000012378	apex1	100	89.389	Oryzias_latipes
ENSHBUG00000005894	apex1	100	89.389	ENSORLG00020021371	apex1	100	89.389	Oryzias_latipes_hni
ENSHBUG00000005894	apex1	100	89.389	ENSORLG00015020089	apex1	100	89.389	Oryzias_latipes_hsok
ENSHBUG00000005894	apex1	100	90.032	ENSOMEG00000018876	apex1	100	90.032	Oryzias_melastigma
ENSHBUG00000005894	apex1	99	66.139	ENSOGAG00000013335	-	99	65.823	Otolemur_garnettii
ENSHBUG00000005894	apex1	90	62.724	ENSOGAG00000029355	-	87	62.681	Otolemur_garnettii
ENSHBUG00000005894	apex1	96	62.418	ENSOARG00000001876	-	86	66.917	Ovis_aries
ENSHBUG00000005894	apex1	99	65.506	ENSOARG00000019740	-	87	70.290	Ovis_aries
ENSHBUG00000005894	apex1	99	54.487	ENSOARG00000014424	-	93	54.369	Ovis_aries
ENSHBUG00000005894	apex1	99	66.559	ENSPPAG00000038760	APEX1	99	66.139	Pan_paniscus
ENSHBUG00000005894	apex1	99	66.456	ENSPPRG00000011794	APEX1	99	66.139	Panthera_pardus
ENSHBUG00000005894	apex1	99	66.456	ENSPTIG00000014829	APEX1	99	66.139	Panthera_tigris_altaica
ENSHBUG00000005894	apex1	99	66.559	ENSPTRG00000006093	APEX1	99	66.139	Pan_troglodytes
ENSHBUG00000005894	apex1	99	67.089	ENSPANG00000022757	APEX1	99	65.823	Papio_anubis
ENSHBUG00000005894	apex1	89	87.319	ENSPKIG00000003504	apex1	99	81.410	Paramormyrops_kingsleyae
ENSHBUG00000005894	apex1	88	77.656	ENSPMGG00000016596	apex1	80	77.656	Periophthalmus_magnuspinnatus
ENSHBUG00000005894	apex1	99	66.139	ENSPEMG00000019097	Apex1	99	65.397	Peromyscus_maniculatus_bairdii
ENSHBUG00000005894	apex1	93	72.474	ENSPMAG00000007275	-	93	73.818	Petromyzon_marinus
ENSHBUG00000005894	apex1	90	68.459	ENSPCIG00000023274	APEX1	86	69.343	Phascolarctos_cinereus
ENSHBUG00000005894	apex1	100	90.968	ENSPFOG00000004178	apex1	100	90.968	Poecilia_formosa
ENSHBUG00000005894	apex1	100	91.290	ENSPLAG00000012779	apex1	100	91.290	Poecilia_latipinna
ENSHBUG00000005894	apex1	100	90.968	ENSPMEG00000019623	apex1	100	90.968	Poecilia_mexicana
ENSHBUG00000005894	apex1	100	89.677	ENSPREG00000014298	apex1	99	89.677	Poecilia_reticulata
ENSHBUG00000005894	apex1	99	66.139	ENSPPYG00000005565	APEX1	99	65.823	Pongo_abelii
ENSHBUG00000005894	apex1	99	65.190	ENSPCAG00000010376	APEX1	99	64.557	Procavia_capensis
ENSHBUG00000005894	apex1	99	65.506	ENSPCOG00000021564	APEX1	99	64.873	Propithecus_coquereli
ENSHBUG00000005894	apex1	99	65.723	ENSPVAG00000010736	APEX1	86	70.909	Pteropus_vampyrus
ENSHBUG00000005894	apex1	100	99.355	ENSPNYG00000023940	apex1	100	99.355	Pundamilia_nyererei
ENSHBUG00000005894	apex1	92	86.014	ENSPNAG00000020897	apex1	96	85.965	Pygocentrus_nattereri
ENSHBUG00000005894	apex1	99	66.772	ENSRNOG00000009663	Apex1	99	66.032	Rattus_norvegicus
ENSHBUG00000005894	apex1	99	67.405	ENSRBIG00000038325	APEX1	98	66.139	Rhinopithecus_bieti
ENSHBUG00000005894	apex1	99	66.246	ENSSBOG00000018921	-	99	66.456	Saimiri_boliviensis_boliviensis
ENSHBUG00000005894	apex1	99	59.223	ENSSBOG00000031372	-	89	62.909	Saimiri_boliviensis_boliviensis
ENSHBUG00000005894	apex1	99	62.270	ENSSHAG00000013524	APEX1	85	68.592	Sarcophilus_harrisii
ENSHBUG00000005894	apex1	99	82.468	ENSSFOG00015001948	apex1	99	82.468	Scleropages_formosus
ENSHBUG00000005894	apex1	100	86.984	ENSSMAG00000013348	apex1	100	87.619	Scophthalmus_maximus
ENSHBUG00000005894	apex1	100	90.000	ENSSDUG00000016377	apex1	99	90.000	Seriola_dumerili
ENSHBUG00000005894	apex1	100	89.677	ENSSLDG00000023005	apex1	100	89.677	Seriola_lalandi_dorsalis
ENSHBUG00000005894	apex1	91	72.857	ENSSPUG00000000531	APEX1	93	73.358	Sphenodon_punctatus
ENSHBUG00000005894	apex1	100	88.710	ENSSPAG00000000458	apex1	100	88.710	Stegastes_partitus
ENSHBUG00000005894	apex1	99	65.823	ENSSSCG00000040060	-	99	65.823	Sus_scrofa
ENSHBUG00000005894	apex1	96	39.934	ENSSSCG00000039705	-	89	41.877	Sus_scrofa
ENSHBUG00000005894	apex1	76	58.723	ENSTGUG00000014378	APEX1	100	58.723	Taeniopygia_guttata
ENSHBUG00000005894	apex1	100	85.304	ENSTRUG00000004268	apex1	95	86.581	Takifugu_rubripes
ENSHBUG00000005894	apex1	100	84.466	ENSTNIG00000005778	apex1	100	84.466	Tetraodon_nigroviridis
ENSHBUG00000005894	apex1	99	63.291	ENSTBEG00000006405	APEX1	99	62.658	Tupaia_belangeri
ENSHBUG00000005894	apex1	76	69.787	ENSTTRG00000007860	APEX1	100	69.787	Tursiops_truncatus
ENSHBUG00000005894	apex1	99	65.823	ENSUAMG00000010457	APEX1	99	65.506	Ursus_americanus
ENSHBUG00000005894	apex1	99	65.823	ENSUMAG00000009178	APEX1	99	65.506	Ursus_maritimus
ENSHBUG00000005894	apex1	76	66.809	ENSVPAG00000005083	APEX1	100	66.809	Vicugna_pacos
ENSHBUG00000005894	apex1	99	66.772	ENSVVUG00000009010	APEX1	99	66.139	Vulpes_vulpes
ENSHBUG00000005894	apex1	99	69.745	ENSXETG00000024773	apex1	87	74.545	Xenopus_tropicalis
ENSHBUG00000005894	apex1	100	90.968	ENSXCOG00000015233	apex1	99	90.968	Xiphophorus_couchianus
ENSHBUG00000005894	apex1	100	90.968	ENSXMAG00000006195	apex1	100	90.968	Xiphophorus_maculatus