EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000005895 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 1591 bases
Position: chrJH425995.1:6-1596
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000004578	zf-C2H2	PF00096.26	3.9e-28	1	5
ENSHBUP00000004578	zf-C2H2	PF00096.26	3.9e-28	2	5
ENSHBUP00000004578	zf-C2H2	PF00096.26	3.9e-28	3	5
ENSHBUP00000004578	zf-C2H2	PF00096.26	3.9e-28	4	5
ENSHBUP00000004578	zf-C2H2	PF00096.26	3.9e-28	5	5
ENSHBUP00000004578	zf-met	PF12874.7	1.3e-05	1	2
ENSHBUP00000004578	zf-met	PF12874.7	1.3e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000008473	-	1317	-	ENSHBUP00000004578	439 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000005895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000005895's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000005895	-	51	33.191	ENSHBUG00000009941	-	61	33.772
ENSHBUG00000005895	-	74	34.118	ENSHBUG00000018916	-	59	34.715
ENSHBUG00000005895	-	57	40.000	ENSHBUG00000003057	-	93	36.364
ENSHBUG00000005895	-	52	36.508	ENSHBUG00000015166	-	80	37.850
ENSHBUG00000005895	-	51	37.500	ENSHBUG00000002541	-	66	37.931
ENSHBUG00000005895	-	50	40.351	ENSHBUG00000012565	-	86	40.351
ENSHBUG00000005895	-	53	31.606	ENSHBUG00000019101	-	58	32.759
ENSHBUG00000005895	-	50	39.899	ENSHBUG00000015719	-	96	39.899
ENSHBUG00000005895	-	62	34.667	ENSHBUG00000017445	zbtb41	51	34.667
ENSHBUG00000005895	-	50	41.892	ENSHBUG00000012230	-	65	41.892
ENSHBUG00000005895	-	56	30.275	ENSHBUG00000009720	-	60	31.313
ENSHBUG00000005895	-	99	84.118	ENSHBUG00000023268	znf710b	87	84.118
ENSHBUG00000005895	-	59	30.332	ENSHBUG00000012492	scrt2	70	30.332
ENSHBUG00000005895	-	57	38.806	ENSHBUG00000001075	-	91	38.806
ENSHBUG00000005895	-	52	30.808	ENSHBUG00000016621	scrt1b	64	31.492
ENSHBUG00000005895	-	55	36.905	ENSHBUG00000020527	-	85	36.905
ENSHBUG00000005895	-	51	34.722	ENSHBUG00000013296	-	97	34.722
ENSHBUG00000005895	-	51	36.364	ENSHBUG00000002878	-	52	36.364
ENSHBUG00000005895	-	50	40.217	ENSHBUG00000004718	-	88	37.566
ENSHBUG00000005895	-	57	43.956	ENSHBUG00000005848	-	88	43.956
ENSHBUG00000005895	-	51	41.176	ENSHBUG00000013292	-	62	41.176
ENSHBUG00000005895	-	50	38.356	ENSHBUG00000007068	-	61	38.356
ENSHBUG00000005895	-	50	37.500	ENSHBUG00000008502	-	82	37.500
ENSHBUG00000005895	-	50	40.541	ENSHBUG00000017542	znf526	55	40.000
ENSHBUG00000005895	-	50	35.398	ENSHBUG00000004217	-	61	35.398
ENSHBUG00000005895	-	65	37.719	ENSHBUG00000009837	znf236	61	37.719
ENSHBUG00000005895	-	53	36.709	ENSHBUG00000021970	-	82	36.709
ENSHBUG00000005895	-	51	37.037	ENSHBUG00000021906	-	67	39.831
ENSHBUG00000005895	-	54	35.124	ENSHBUG00000003165	-	62	35.931
ENSHBUG00000005895	-	50	30.814	ENSHBUG00000014494	-	65	31.414
ENSHBUG00000005895	-	50	35.754	ENSHBUG00000013490	-	59	35.754
ENSHBUG00000005895	-	56	39.474	ENSHBUG00000007764	snai2	58	39.474

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000005895	-	99	81.765	ENSAPOG00000021512	znf710b	91	81.765	Acanthochromis_polyacanthus
ENSHBUG00000005895	-	98	82.975	ENSACIG00000020982	znf710b	91	80.078	Amphilophus_citrinellus
ENSHBUG00000005895	-	99	84.118	ENSACLG00000013604	znf710b	91	84.118	Astatotilapia_calliptera
ENSHBUG00000005895	-	98	78.474	ENSCSEG00000012005	znf710b	91	78.474	Cynoglossus_semilaevis
ENSHBUG00000005895	-	98	65.356	ENSELUG00000017700	znf710b	91	66.479	Esox_lucius
ENSHBUG00000005895	-	98	81.684	ENSFHEG00000014039	znf710b	91	79.843	Fundulus_heteroclitus
ENSHBUG00000005895	-	51	98.611	ENSGMOG00000017555	znf710b	85	98.611	Gadus_morhua
ENSHBUG00000005895	-	99	80.235	ENSGACG00000016481	znf710b	88	80.235	Gasterosteus_aculeatus
ENSHBUG00000005895	-	99	80.769	ENSHCOG00000018972	znf710b	91	80.769	Hippocampus_comes
ENSHBUG00000005895	-	98	75.930	ENSKMAG00000017329	znf710b	91	75.930	Kryptolebias_marmoratus
ENSHBUG00000005895	-	99	80.747	ENSMAMG00000001213	znf710b	91	80.747	Mastacembelus_armatus
ENSHBUG00000005895	-	99	84.118	ENSMZEG00005008625	znf710b	91	84.118	Maylandia_zebra
ENSHBUG00000005895	-	98	79.055	ENSMMOG00000000136	znf710b	93	79.055	Mola_mola
ENSHBUG00000005895	-	99	83.922	ENSNBRG00000000292	znf710b	91	83.922	Neolamprologus_brichardi
ENSHBUG00000005895	-	99	81.287	ENSONIG00000002589	znf710b	89	81.287	Oreochromis_niloticus
ENSHBUG00000005895	-	98	82.452	ENSORLG00000012610	znf710b	92	82.241	Oryzias_latipes
ENSHBUG00000005895	-	98	82.452	ENSORLG00020000009	znf710b	92	82.241	Oryzias_latipes_hni
ENSHBUG00000005895	-	98	73.846	ENSPMGG00000008771	znf710b	88	73.846	Periophthalmus_magnuspinnatus
ENSHBUG00000005895	-	98	79.883	ENSPFOG00000017353	znf710b	91	79.883	Poecilia_formosa
ENSHBUG00000005895	-	98	80.078	ENSPLAG00000001306	znf710b	91	80.078	Poecilia_latipinna
ENSHBUG00000005895	-	98	80.078	ENSPMEG00000012507	znf710b	91	80.078	Poecilia_mexicana
ENSHBUG00000005895	-	98	79.883	ENSPREG00000005030	znf710b	87	79.883	Poecilia_reticulata
ENSHBUG00000005895	-	99	84.118	ENSPNYG00000019563	znf710b	87	84.118	Pundamilia_nyererei
ENSHBUG00000005895	-	99	80.354	ENSSMAG00000007380	znf710b	91	80.354	Scophthalmus_maximus
ENSHBUG00000005895	-	99	81.373	ENSSDUG00000004144	znf710b	91	81.373	Seriola_dumerili
ENSHBUG00000005895	-	98	80.039	ENSSLDG00000003269	znf710b	91	80.039	Seriola_lalandi_dorsalis
ENSHBUG00000005895	-	98	81.504	ENSTNIG00000011367	znf710b	99	81.504	Tetraodon_nigroviridis
ENSHBUG00000005895	-	98	79.883	ENSXCOG00000018117	znf710b	90	78.776	Xiphophorus_couchianus
ENSHBUG00000005895	-	98	79.883	ENSXMAG00000018118	znf710b	90	79.883	Xiphophorus_maculatus