EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000005960 (Gene tree)
Gene ID: 102296495
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 19241 bases
Position: chrJH425423.1:1842296-1861536
Accession: 102296495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000024472	CPSF_A	PF03178.15	1.1e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000008455	-	3150	XM_005929042	ENSHBUP00000024472	1049 (aa)	XP_005929104	-

Gene Model

Click here to download ENSHBUG00000005960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000005960's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000005960	sf3b3	100	86.875	ENSG00000189091	SF3B3	97	90.909	Homo_sapiens
ENSHBUG00000005960	sf3b3	96	91.341	ENSAPOG00000006172	sf3b3	90	91.341	Acanthochromis_polyacanthus
ENSHBUG00000005960	sf3b3	100	86.964	ENSAMEG00000002187	SF3B3	92	85.804	Ailuropoda_melanoleuca
ENSHBUG00000005960	sf3b3	100	95.124	ENSACIG00000016487	sf3b3	100	95.124	Amphilophus_citrinellus
ENSHBUG00000005960	sf3b3	100	91.786	ENSAOCG00000007158	sf3b3	92	91.786	Amphiprion_ocellaris
ENSHBUG00000005960	sf3b3	100	91.786	ENSAPEG00000022786	sf3b3	92	91.786	Amphiprion_percula
ENSHBUG00000005960	sf3b3	100	91.607	ENSATEG00000013708	sf3b3	92	91.607	Anabas_testudineus
ENSHBUG00000005960	sf3b3	81	89.628	ENSAPLG00000004996	SF3B3	90	88.162	Anas_platyrhynchos
ENSHBUG00000005960	sf3b3	100	86.964	ENSACAG00000001817	SF3B3	92	85.804	Anolis_carolinensis
ENSHBUG00000005960	sf3b3	100	86.875	ENSANAG00000028001	SF3B3	92	85.714	Aotus_nancymaae
ENSHBUG00000005960	sf3b3	100	95.768	ENSACLG00000022555	sf3b3	100	95.768	Astatotilapia_calliptera
ENSHBUG00000005960	sf3b3	100	90.625	ENSAMXG00000003410	sf3b3	92	89.643	Astyanax_mexicanus
ENSHBUG00000005960	sf3b3	100	88.033	ENSBTAG00000010627	SF3B3	92	86.854	Bos_taurus
ENSHBUG00000005960	sf3b3	99	55.605	WBGene00019323	teg-4	92	54.545	Caenorhabditis_elegans
ENSHBUG00000005960	sf3b3	100	87.580	ENSCJAG00000014773	SF3B3	100	86.385	Callithrix_jacchus
ENSHBUG00000005960	sf3b3	100	86.964	ENSCAFG00000020151	SF3B3	92	85.804	Canis_familiaris
ENSHBUG00000005960	sf3b3	100	86.964	ENSCAFG00020020912	SF3B3	92	85.804	Canis_lupus_dingo
ENSHBUG00000005960	sf3b3	100	86.964	ENSCHIG00000019822	SF3B3	92	85.804	Capra_hircus
ENSHBUG00000005960	sf3b3	100	86.875	ENSTSYG00000007910	SF3B3	92	85.714	Carlito_syrichta
ENSHBUG00000005960	sf3b3	94	73.455	ENSCAPG00000001484	SF3B3	81	73.455	Cavia_aperea
ENSHBUG00000005960	sf3b3	100	85.536	ENSCPOG00000000586	SF3B3	92	84.375	Cavia_porcellus
ENSHBUG00000005960	sf3b3	100	86.875	ENSCCAG00000017736	SF3B3	92	85.714	Cebus_capucinus
ENSHBUG00000005960	sf3b3	100	86.875	ENSCATG00000036562	SF3B3	92	85.714	Cercocebus_atys
ENSHBUG00000005960	sf3b3	100	86.875	ENSCLAG00000003921	SF3B3	92	85.714	Chinchilla_lanigera
ENSHBUG00000005960	sf3b3	100	86.875	ENSCSAG00000004371	SF3B3	92	85.714	Chlorocebus_sabaeus
ENSHBUG00000005960	sf3b3	88	87.079	ENSCHOG00000001878	SF3B3	77	86.391	Choloepus_hoffmanni
ENSHBUG00000005960	sf3b3	100	86.518	ENSCPBG00000015853	SF3B3	92	85.357	Chrysemys_picta_bellii
ENSHBUG00000005960	sf3b3	99	74.643	ENSCING00000001342	-	92	73.571	Ciona_intestinalis
ENSHBUG00000005960	sf3b3	99	74.834	ENSCSAVG00000011454	-	92	72.679	Ciona_savignyi
ENSHBUG00000005960	sf3b3	100	85.155	ENSCANG00000042920	SF3B3	92	84.153	Colobus_angolensis_palliatus
ENSHBUG00000005960	sf3b3	100	86.786	ENSCGRG00001015908	Sf3b3	92	85.625	Cricetulus_griseus_chok1gshd
ENSHBUG00000005960	sf3b3	100	86.786	ENSCGRG00000010180	Sf3b3	92	85.625	Cricetulus_griseus_crigri
ENSHBUG00000005960	sf3b3	83	91.602	ENSCSEG00000014192	sf3b3	90	90.387	Cynoglossus_semilaevis
ENSHBUG00000005960	sf3b3	99	90.795	ENSCVAG00000010459	sf3b3	92	90.795	Cyprinodon_variegatus
ENSHBUG00000005960	sf3b3	100	90.357	ENSDARG00000103553	sf3b3	92	89.375	Danio_rerio
ENSHBUG00000005960	sf3b3	92	85.921	ENSDNOG00000043626	SF3B3	100	84.667	Dasypus_novemcinctus
ENSHBUG00000005960	sf3b3	100	86.875	ENSDORG00000014176	Sf3b3	92	85.714	Dipodomys_ordii
ENSHBUG00000005960	sf3b3	99	69.258	FBgn0035162	Sf3b3	92	68.375	Drosophila_melanogaster
ENSHBUG00000005960	sf3b3	81	98.571	ENSETEG00000002729	SF3B3	70	98.571	Echinops_telfairi
ENSHBUG00000005960	sf3b3	99	80.556	ENSEBUG00000006117	sf3b3	92	79.928	Eptatretus_burgeri
ENSHBUG00000005960	sf3b3	100	86.964	ENSEASG00005013376	SF3B3	92	85.804	Equus_asinus_asinus
ENSHBUG00000005960	sf3b3	100	86.964	ENSECAG00000014053	SF3B3	92	85.804	Equus_caballus
ENSHBUG00000005960	sf3b3	92	85.179	ENSEEUG00000015611	SF3B3	85	85.179	Erinaceus_europaeus
ENSHBUG00000005960	sf3b3	100	88.780	ENSELUG00000015417	sf3b3	92	87.801	Esox_lucius
ENSHBUG00000005960	sf3b3	100	86.964	ENSFCAG00000009487	SF3B3	92	85.804	Felis_catus
ENSHBUG00000005960	sf3b3	100	86.607	ENSFALG00000007372	SF3B3	92	85.446	Ficedula_albicollis
ENSHBUG00000005960	sf3b3	100	86.875	ENSFDAG00000002608	SF3B3	92	85.714	Fukomys_damarensis
ENSHBUG00000005960	sf3b3	99	91.332	ENSFHEG00000017824	sf3b3	93	91.332	Fundulus_heteroclitus
ENSHBUG00000005960	sf3b3	100	86.441	ENSGMOG00000008139	sf3b3	92	85.459	Gadus_morhua
ENSHBUG00000005960	sf3b3	100	86.875	ENSGALG00000002531	SF3B3	92	85.714	Gallus_gallus
ENSHBUG00000005960	sf3b3	99	90.885	ENSGAFG00000015206	sf3b3	92	90.885	Gambusia_affinis
ENSHBUG00000005960	sf3b3	100	90.812	ENSGACG00000002646	sf3b3	92	90.812	Gasterosteus_aculeatus
ENSHBUG00000005960	sf3b3	96	86.406	ENSGAGG00000006746	SF3B3	89	85.196	Gopherus_agassizii
ENSHBUG00000005960	sf3b3	100	86.875	ENSGGOG00000003246	SF3B3	92	85.714	Gorilla_gorilla
ENSHBUG00000005960	sf3b3	100	86.875	ENSHGLG00000010135	SF3B3	92	85.714	Heterocephalus_glaber_female
ENSHBUG00000005960	sf3b3	100	82.482	ENSHGLG00100011148	SF3B3	85	98.817	Heterocephalus_glaber_male
ENSHBUG00000005960	sf3b3	100	91.552	ENSHCOG00000011981	sf3b3	100	90.542	Hippocampus_comes
ENSHBUG00000005960	sf3b3	100	90.625	ENSIPUG00000020435	sf3b3	92	90.625	Ictalurus_punctatus
ENSHBUG00000005960	sf3b3	100	86.875	ENSSTOG00000007065	SF3B3	92	85.714	Ictidomys_tridecemlineatus
ENSHBUG00000005960	sf3b3	100	86.875	ENSJJAG00000003948	Sf3b3	92	85.714	Jaculus_jaculus
ENSHBUG00000005960	sf3b3	99	88.651	ENSKMAG00000004066	sf3b3	90	90.680	Kryptolebias_marmoratus
ENSHBUG00000005960	sf3b3	100	91.071	ENSLBEG00000018302	sf3b3	92	91.071	Labrus_bergylta
ENSHBUG00000005960	sf3b3	100	83.599	ENSLACG00000012501	SF3B3	94	82.447	Latimeria_chalumnae
ENSHBUG00000005960	sf3b3	100	89.741	ENSLOCG00000007566	sf3b3	92	88.760	Lepisosteus_oculatus
ENSHBUG00000005960	sf3b3	100	86.964	ENSLAFG00000012219	SF3B3	100	88.439	Loxodonta_africana
ENSHBUG00000005960	sf3b3	100	86.875	ENSMFAG00000045487	SF3B3	92	85.714	Macaca_fascicularis
ENSHBUG00000005960	sf3b3	100	86.875	ENSMMUG00000017812	SF3B3	92	85.714	Macaca_mulatta
ENSHBUG00000005960	sf3b3	100	86.875	ENSMNEG00000033385	SF3B3	92	85.714	Macaca_nemestrina
ENSHBUG00000005960	sf3b3	100	83.036	ENSMLEG00000043891	SF3B3	92	81.875	Mandrillus_leucophaeus
ENSHBUG00000005960	sf3b3	100	91.607	ENSMAMG00000016837	sf3b3	92	91.607	Mastacembelus_armatus
ENSHBUG00000005960	sf3b3	96	95.611	ENSMZEG00005026015	sf3b3	99	95.611	Maylandia_zebra
ENSHBUG00000005960	sf3b3	100	95.768	ENSMZEG00005010836	sf3b3	100	95.768	Maylandia_zebra
ENSHBUG00000005960	sf3b3	100	86.875	ENSMGAG00000001597	SF3B3	92	85.714	Meleagris_gallopavo
ENSHBUG00000005960	sf3b3	80	77.273	ENSMAUG00000013618	Sf3b3	87	77.273	Mesocricetus_auratus
ENSHBUG00000005960	sf3b3	100	85.829	ENSMICG00000001363	SF3B3	92	84.670	Microcebus_murinus
ENSHBUG00000005960	sf3b3	100	86.786	ENSMOCG00000006108	Sf3b3	92	85.625	Microtus_ochrogaster
ENSHBUG00000005960	sf3b3	96	93.893	ENSMMOG00000002598	sf3b3	97	93.893	Mola_mola
ENSHBUG00000005960	sf3b3	100	83.229	ENSMODG00000014363	SF3B3	92	82.426	Monodelphis_domestica
ENSHBUG00000005960	sf3b3	100	90.982	ENSMALG00000008014	sf3b3	92	90.982	Monopterus_albus
ENSHBUG00000005960	sf3b3	100	86.875	MGP_CAROLIEiJ_G0031563	Sf3b3	92	85.714	Mus_caroli
ENSHBUG00000005960	sf3b3	100	86.786	ENSMUSG00000033732	Sf3b3	92	85.625	Mus_musculus
ENSHBUG00000005960	sf3b3	100	86.696	MGP_SPRETEiJ_G0032681	Sf3b3	92	85.536	Mus_spretus
ENSHBUG00000005960	sf3b3	100	86.964	ENSMPUG00000010277	SF3B3	92	85.804	Mustela_putorius_furo
ENSHBUG00000005960	sf3b3	100	86.875	ENSMLUG00000014607	SF3B3	92	85.714	Myotis_lucifugus
ENSHBUG00000005960	sf3b3	100	86.875	ENSNGAG00000021903	Sf3b3	92	85.714	Nannospalax_galili
ENSHBUG00000005960	sf3b3	90	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSHBUG00000005960	sf3b3	100	85.549	ENSNLEG00000016127	SF3B3	92	84.389	Nomascus_leucogenys
ENSHBUG00000005960	sf3b3	91	82.126	ENSMEUG00000004479	SF3B3	86	82.126	Notamacropus_eugenii
ENSHBUG00000005960	sf3b3	100	83.644	ENSOPRG00000009847	SF3B3	94	83.750	Ochotona_princeps
ENSHBUG00000005960	sf3b3	100	86.875	ENSODEG00000014154	SF3B3	92	85.714	Octodon_degus
ENSHBUG00000005960	sf3b3	100	92.768	ENSONIG00000011198	sf3b3	92	92.768	Oreochromis_niloticus
ENSHBUG00000005960	sf3b3	100	87.054	ENSOANG00000001161	-	92	85.893	Ornithorhynchus_anatinus
ENSHBUG00000005960	sf3b3	100	84.732	ENSOCUG00000004139	SF3B3	92	83.571	Oryctolagus_cuniculus
ENSHBUG00000005960	sf3b3	100	93.284	ENSORLG00000013472	sf3b3	100	93.284	Oryzias_latipes
ENSHBUG00000005960	sf3b3	100	93.284	ENSORLG00020017473	sf3b3	100	93.284	Oryzias_latipes_hni
ENSHBUG00000005960	sf3b3	100	93.284	ENSORLG00015007710	sf3b3	100	93.284	Oryzias_latipes_hsok
ENSHBUG00000005960	sf3b3	100	90.714	ENSOMEG00000014483	sf3b3	92	90.714	Oryzias_melastigma
ENSHBUG00000005960	sf3b3	100	86.786	ENSOGAG00000016051	SF3B3	92	85.625	Otolemur_garnettii
ENSHBUG00000005960	sf3b3	100	86.732	ENSOARG00000004816	SF3B3	92	85.574	Ovis_aries
ENSHBUG00000005960	sf3b3	100	86.875	ENSPPAG00000026807	SF3B3	92	85.714	Pan_paniscus
ENSHBUG00000005960	sf3b3	100	86.964	ENSPPRG00000001686	SF3B3	92	85.804	Panthera_pardus
ENSHBUG00000005960	sf3b3	97	89.279	ENSPTIG00000020382	SF3B3	100	88.046	Panthera_tigris_altaica
ENSHBUG00000005960	sf3b3	100	86.875	ENSPTRG00000008308	SF3B3	92	85.714	Pan_troglodytes
ENSHBUG00000005960	sf3b3	100	86.875	ENSPANG00000024075	SF3B3	92	85.714	Papio_anubis
ENSHBUG00000005960	sf3b3	100	92.364	ENSPKIG00000002712	sf3b3	100	91.352	Paramormyrops_kingsleyae
ENSHBUG00000005960	sf3b3	97	86.385	ENSPSIG00000002232	SF3B3	100	85.189	Pelodiscus_sinensis
ENSHBUG00000005960	sf3b3	100	86.786	ENSPEMG00000008603	Sf3b3	92	85.625	Peromyscus_maniculatus_bairdii
ENSHBUG00000005960	sf3b3	99	84.361	ENSPMAG00000001793	sf3b3	92	83.378	Petromyzon_marinus
ENSHBUG00000005960	sf3b3	100	87.054	ENSPCIG00000014927	SF3B3	96	85.893	Phascolarctos_cinereus
ENSHBUG00000005960	sf3b3	99	91.153	ENSPFOG00000015516	sf3b3	92	91.153	Poecilia_formosa
ENSHBUG00000005960	sf3b3	99	91.153	ENSPLAG00000014330	sf3b3	92	91.153	Poecilia_latipinna
ENSHBUG00000005960	sf3b3	99	91.242	ENSPMEG00000019856	sf3b3	92	91.242	Poecilia_mexicana
ENSHBUG00000005960	sf3b3	81	93.341	ENSPREG00000019669	sf3b3	87	93.341	Poecilia_reticulata
ENSHBUG00000005960	sf3b3	95	97.297	ENSPPYG00000007539	SF3B3	92	97.297	Pongo_abelii
ENSHBUG00000005960	sf3b3	100	69.375	ENSPCAG00000002623	SF3B3	92	69.375	Procavia_capensis
ENSHBUG00000005960	sf3b3	90	85.378	ENSPCOG00000026582	SF3B3	91	85.378	Propithecus_coquereli
ENSHBUG00000005960	sf3b3	100	86.875	ENSPVAG00000000684	SF3B3	92	85.714	Pteropus_vampyrus
ENSHBUG00000005960	sf3b3	100	95.860	ENSPNYG00000003528	sf3b3	100	95.860	Pundamilia_nyererei
ENSHBUG00000005960	sf3b3	100	90.179	ENSPNAG00000015419	sf3b3	92	89.196	Pygocentrus_nattereri
ENSHBUG00000005960	sf3b3	100	86.786	ENSRNOG00000017724	Sf3b3	92	85.625	Rattus_norvegicus
ENSHBUG00000005960	sf3b3	100	86.875	ENSRBIG00000021904	SF3B3	92	85.714	Rhinopithecus_bieti
ENSHBUG00000005960	sf3b3	100	86.875	ENSRROG00000045703	SF3B3	92	85.714	Rhinopithecus_roxellana
ENSHBUG00000005960	sf3b3	80	41.935	YML049C	-	68	41.935	Saccharomyces_cerevisiae
ENSHBUG00000005960	sf3b3	100	86.875	ENSSBOG00000029156	SF3B3	92	85.714	Saimiri_boliviensis_boliviensis
ENSHBUG00000005960	sf3b3	100	87.054	ENSSHAG00000000372	SF3B3	96	85.893	Sarcophilus_harrisii
ENSHBUG00000005960	sf3b3	100	92.732	ENSSFOG00015012877	sf3b3	100	92.732	Scleropages_formosus
ENSHBUG00000005960	sf3b3	100	90.446	ENSSMAG00000014386	sf3b3	92	89.464	Scophthalmus_maximus
ENSHBUG00000005960	sf3b3	100	91.786	ENSSDUG00000021201	sf3b3	92	91.786	Seriola_dumerili
ENSHBUG00000005960	sf3b3	100	91.786	ENSSLDG00000017532	sf3b3	92	91.786	Seriola_lalandi_dorsalis
ENSHBUG00000005960	sf3b3	93	91.304	ENSSARG00000006917	SF3B3	83	91.304	Sorex_araneus
ENSHBUG00000005960	sf3b3	100	86.607	ENSSPUG00000006253	SF3B3	92	85.446	Sphenodon_punctatus
ENSHBUG00000005960	sf3b3	100	83.125	ENSSPAG00000003125	sf3b3	92	83.125	Stegastes_partitus
ENSHBUG00000005960	sf3b3	100	89.604	ENSSSCG00000025323	SF3B3	100	88.408	Sus_scrofa
ENSHBUG00000005960	sf3b3	100	86.798	ENSTGUG00000006082	SF3B3	92	85.638	Taeniopygia_guttata
ENSHBUG00000005960	sf3b3	57	85.904	ENSTRUG00000015623	sf3b3	96	80.880	Takifugu_rubripes
ENSHBUG00000005960	sf3b3	88	92.739	ENSTNIG00000004857	sf3b3	89	92.739	Tetraodon_nigroviridis
ENSHBUG00000005960	sf3b3	91	80.982	ENSTBEG00000002946	SF3B3	87	80.982	Tupaia_belangeri
ENSHBUG00000005960	sf3b3	100	86.071	ENSTTRG00000005855	SF3B3	92	84.911	Tursiops_truncatus
ENSHBUG00000005960	sf3b3	100	86.964	ENSUAMG00000006780	SF3B3	92	85.804	Ursus_americanus
ENSHBUG00000005960	sf3b3	100	86.964	ENSUMAG00000017757	SF3B3	92	85.804	Ursus_maritimus
ENSHBUG00000005960	sf3b3	100	70.536	ENSVPAG00000003202	SF3B3	92	69.375	Vicugna_pacos
ENSHBUG00000005960	sf3b3	100	86.964	ENSVVUG00000017922	SF3B3	92	85.804	Vulpes_vulpes
ENSHBUG00000005960	sf3b3	100	87.143	ENSXETG00000032869	SF3B3	92	85.982	Xenopus_tropicalis
ENSHBUG00000005960	sf3b3	77	93.246	ENSXCOG00000013628	sf3b3	86	93.246	Xiphophorus_couchianus
ENSHBUG00000005960	sf3b3	99	91.063	ENSXMAG00000006334	sf3b3	92	91.063	Xiphophorus_maculatus