EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000006049 (Gene tree)
Gene ID: 102294414
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 8703 bases
Position: chrJH425654.1:54108-62810
Accession: 102294414
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000004701	RNase_H2-Ydr279	PF09468.10	7.3e-16	1	1
ENSHBUP00000004696	RNase_H2-Ydr279	PF09468.10	7.5e-16	1	1
ENSHBUP00000004708	RNase_H2-Ydr279	PF09468.10	8.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000008237	-	3285	XM_005942167	ENSHBUP00000004708	306 (aa)	XP_005942229	UPI0003BC68C1
ENSHBUT00000008266	-	864	XM_005942168	ENSHBUP00000004696	287 (aa)	XP_005942230	-
ENSHBUT00000008255	-	3306	-	ENSHBUP00000004701	277 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000006049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000006049's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000006049	rnaseh2b	89	52.529	ENSG00000136104	RNASEH2B	98	51.092	Homo_sapiens
ENSHBUG00000006049	rnaseh2b	100	85.948	ENSAPOG00000010496	rnaseh2b	100	85.948	Acanthochromis_polyacanthus
ENSHBUG00000006049	rnaseh2b	89	50.769	ENSAMEG00000012040	RNASEH2B	92	50.368	Ailuropoda_melanoleuca
ENSHBUG00000006049	rnaseh2b	100	85.714	ENSACIG00000021991	rnaseh2b	100	85.714	Amphilophus_citrinellus
ENSHBUG00000006049	rnaseh2b	100	85.948	ENSAOCG00000013398	rnaseh2b	100	85.948	Amphiprion_ocellaris
ENSHBUG00000006049	rnaseh2b	100	85.621	ENSAPEG00000006033	rnaseh2b	100	85.621	Amphiprion_percula
ENSHBUG00000006049	rnaseh2b	100	83.007	ENSATEG00000008370	rnaseh2b	100	83.007	Anabas_testudineus
ENSHBUG00000006049	rnaseh2b	85	63.008	ENSAPLG00000008955	RNASEH2B	100	63.004	Anas_platyrhynchos
ENSHBUG00000006049	rnaseh2b	93	55.517	ENSACAG00000011679	RNASEH2B	97	55.517	Anolis_carolinensis
ENSHBUG00000006049	rnaseh2b	91	51.724	ENSANAG00000020662	RNASEH2B	87	51.282	Aotus_nancymaae
ENSHBUG00000006049	rnaseh2b	100	99.346	ENSACLG00000000467	rnaseh2b	100	99.346	Astatotilapia_calliptera
ENSHBUG00000006049	rnaseh2b	99	68.301	ENSAMXG00000014351	rnaseh2b	99	68.301	Astyanax_mexicanus
ENSHBUG00000006049	rnaseh2b	90	49.104	ENSBTAG00000020149	RNASEH2B	90	49.104	Bos_taurus
ENSHBUG00000006049	rnaseh2b	89	51.172	ENSCJAG00000008585	-	95	48.780	Callithrix_jacchus
ENSHBUG00000006049	rnaseh2b	83	44.589	ENSCJAG00000003822	-	86	44.589	Callithrix_jacchus
ENSHBUG00000006049	rnaseh2b	98	46.078	ENSCAFG00000004295	RNASEH2B	93	46.078	Canis_familiaris
ENSHBUG00000006049	rnaseh2b	93	47.917	ENSCAFG00020000250	RNASEH2B	94	47.917	Canis_lupus_dingo
ENSHBUG00000006049	rnaseh2b	80	47.414	ENSCHIG00000012982	-	82	47.414	Capra_hircus
ENSHBUG00000006049	rnaseh2b	89	50.588	ENSCHIG00000018220	RNASEH2B	87	50.187	Capra_hircus
ENSHBUG00000006049	rnaseh2b	93	49.813	ENSTSYG00000009176	-	87	50.186	Carlito_syrichta
ENSHBUG00000006049	rnaseh2b	92	42.264	ENSTSYG00000031177	-	87	43.071	Carlito_syrichta
ENSHBUG00000006049	rnaseh2b	93	42.697	ENSCAPG00000009978	RNASEH2B	91	43.123	Cavia_aperea
ENSHBUG00000006049	rnaseh2b	89	49.225	ENSCPOG00000032527	RNASEH2B	87	48.519	Cavia_porcellus
ENSHBUG00000006049	rnaseh2b	89	51.751	ENSCCAG00000026979	RNASEH2B	96	43.145	Cebus_capucinus
ENSHBUG00000006049	rnaseh2b	91	49.822	ENSCATG00000031336	RNASEH2B	79	49.822	Cercocebus_atys
ENSHBUG00000006049	rnaseh2b	89	52.529	ENSCLAG00000003517	RNASEH2B	74	52.045	Chinchilla_lanigera
ENSHBUG00000006049	rnaseh2b	87	51.373	ENSCSAG00000017701	RNASEH2B	81	50.936	Chlorocebus_sabaeus
ENSHBUG00000006049	rnaseh2b	95	40.136	ENSCHOG00000013688	RNASEH2B	95	41.497	Choloepus_hoffmanni
ENSHBUG00000006049	rnaseh2b	99	57.792	ENSCPBG00000008684	RNASEH2B	95	57.792	Chrysemys_picta_bellii
ENSHBUG00000006049	rnaseh2b	95	33.557	ENSCING00000016454	-	96	33.557	Ciona_intestinalis
ENSHBUG00000006049	rnaseh2b	89	51.154	ENSCANG00000041511	-	87	50.735	Colobus_angolensis_palliatus
ENSHBUG00000006049	rnaseh2b	89	52.918	ENSCGRG00001000611	Rnaseh2b	87	52.788	Cricetulus_griseus_chok1gshd
ENSHBUG00000006049	rnaseh2b	89	52.918	ENSCGRG00000006077	Rnaseh2b	87	52.788	Cricetulus_griseus_crigri
ENSHBUG00000006049	rnaseh2b	100	81.185	ENSCSEG00000004910	rnaseh2b	100	81.185	Cynoglossus_semilaevis
ENSHBUG00000006049	rnaseh2b	100	79.412	ENSCVAG00000005212	rnaseh2b	100	79.412	Cyprinodon_variegatus
ENSHBUG00000006049	rnaseh2b	99	72.222	ENSDARG00000005128	rnaseh2b	99	72.222	Danio_rerio
ENSHBUG00000006049	rnaseh2b	89	48.047	ENSDNOG00000034290	-	87	47.761	Dasypus_novemcinctus
ENSHBUG00000006049	rnaseh2b	89	49.612	ENSDNOG00000049666	-	87	48.889	Dasypus_novemcinctus
ENSHBUG00000006049	rnaseh2b	99	48.026	ENSDORG00000010708	Rnaseh2b	98	48.026	Dipodomys_ordii
ENSHBUG00000006049	rnaseh2b	92	36.842	ENSEBUG00000005965	rnaseh2b	100	36.842	Eptatretus_burgeri
ENSHBUG00000006049	rnaseh2b	89	52.529	ENSEASG00005017323	RNASEH2B	87	51.673	Equus_asinus_asinus
ENSHBUG00000006049	rnaseh2b	89	52.918	ENSECAG00000014262	RNASEH2B	87	52.045	Equus_caballus
ENSHBUG00000006049	rnaseh2b	100	73.941	ENSELUG00000019560	rnaseh2b	100	73.941	Esox_lucius
ENSHBUG00000006049	rnaseh2b	87	50.000	ENSFCAG00000014257	RNASEH2B	82	49.618	Felis_catus
ENSHBUG00000006049	rnaseh2b	93	60.279	ENSFALG00000008435	RNASEH2B	97	60.279	Ficedula_albicollis
ENSHBUG00000006049	rnaseh2b	89	51.362	ENSFDAG00000009920	RNASEH2B	93	50.558	Fukomys_damarensis
ENSHBUG00000006049	rnaseh2b	100	82.680	ENSFHEG00000012160	rnaseh2b	100	82.680	Fundulus_heteroclitus
ENSHBUG00000006049	rnaseh2b	100	69.283	ENSGMOG00000016830	rnaseh2b	100	69.283	Gadus_morhua
ENSHBUG00000006049	rnaseh2b	97	57.143	ENSGALG00000017015	RNASEH2B	100	58.252	Gallus_gallus
ENSHBUG00000006049	rnaseh2b	100	81.373	ENSGAFG00000021222	rnaseh2b	100	81.373	Gambusia_affinis
ENSHBUG00000006049	rnaseh2b	100	77.885	ENSGACG00000002821	rnaseh2b	100	77.885	Gasterosteus_aculeatus
ENSHBUG00000006049	rnaseh2b	91	60.573	ENSGAGG00000014722	RNASEH2B	99	60.573	Gopherus_agassizii
ENSHBUG00000006049	rnaseh2b	89	51.538	ENSGGOG00000001044	RNASEH2B	87	51.103	Gorilla_gorilla
ENSHBUG00000006049	rnaseh2b	89	51.751	ENSHGLG00100015953	RNASEH2B	91	50.929	Heterocephalus_glaber_male
ENSHBUG00000006049	rnaseh2b	100	76.471	ENSHCOG00000003318	rnaseh2b	100	76.471	Hippocampus_comes
ENSHBUG00000006049	rnaseh2b	100	72.313	ENSIPUG00000023815	rnaseh2b	100	72.313	Ictalurus_punctatus
ENSHBUG00000006049	rnaseh2b	89	52.157	ENSSTOG00000015126	RNASEH2B	91	51.685	Ictidomys_tridecemlineatus
ENSHBUG00000006049	rnaseh2b	89	52.157	ENSJJAG00000013335	Rnaseh2b	93	50.909	Jaculus_jaculus
ENSHBUG00000006049	rnaseh2b	100	82.680	ENSKMAG00000002198	rnaseh2b	100	82.680	Kryptolebias_marmoratus
ENSHBUG00000006049	rnaseh2b	100	81.699	ENSLBEG00000019331	rnaseh2b	100	81.699	Labrus_bergylta
ENSHBUG00000006049	rnaseh2b	73	61.792	ENSLACG00000010782	RNASEH2B	92	61.842	Latimeria_chalumnae
ENSHBUG00000006049	rnaseh2b	100	68.404	ENSLOCG00000009296	rnaseh2b	100	68.404	Lepisosteus_oculatus
ENSHBUG00000006049	rnaseh2b	93	48.315	ENSLAFG00000030158	RNASEH2B	87	48.699	Loxodonta_africana
ENSHBUG00000006049	rnaseh2b	89	52.140	ENSMFAG00000038464	-	87	51.673	Macaca_fascicularis
ENSHBUG00000006049	rnaseh2b	89	47.471	ENSMMUG00000021746	RNASEH2B	85	47.212	Macaca_mulatta
ENSHBUG00000006049	rnaseh2b	89	52.140	ENSMNEG00000030580	RNASEH2B	87	51.673	Macaca_nemestrina
ENSHBUG00000006049	rnaseh2b	89	51.538	ENSMLEG00000043911	-	87	51.103	Mandrillus_leucophaeus
ENSHBUG00000006049	rnaseh2b	100	83.660	ENSMAMG00000017109	rnaseh2b	100	83.660	Mastacembelus_armatus
ENSHBUG00000006049	rnaseh2b	100	93.709	ENSMZEG00005021926	rnaseh2b	100	93.709	Maylandia_zebra
ENSHBUG00000006049	rnaseh2b	90	58.730	ENSMGAG00000015025	RNASEH2B	97	60.791	Meleagris_gallopavo
ENSHBUG00000006049	rnaseh2b	89	52.529	ENSMAUG00000016520	Rnaseh2b	87	52.045	Mesocricetus_auratus
ENSHBUG00000006049	rnaseh2b	89	50.584	ENSMICG00000000528	RNASEH2B	87	50.186	Microcebus_murinus
ENSHBUG00000006049	rnaseh2b	99	79.522	ENSMMOG00000019799	rnaseh2b	99	84.859	Mola_mola
ENSHBUG00000006049	rnaseh2b	98	53.465	ENSMODG00000010775	RNASEH2B	99	53.465	Monodelphis_domestica
ENSHBUG00000006049	rnaseh2b	99	82.623	ENSMALG00000004463	rnaseh2b	100	82.623	Monopterus_albus
ENSHBUG00000006049	rnaseh2b	77	54.955	MGP_CAROLIEiJ_G0019389	Rnaseh2b	85	55.172	Mus_caroli
ENSHBUG00000006049	rnaseh2b	89	53.307	ENSMUSG00000021932	Rnaseh2b	90	51.761	Mus_musculus
ENSHBUG00000006049	rnaseh2b	95	41.018	MGP_PahariEiJ_G0030407	-	95	41.018	Mus_pahari
ENSHBUG00000006049	rnaseh2b	76	46.667	ENSMPUG00000018010	RNASEH2B	88	46.667	Mustela_putorius_furo
ENSHBUG00000006049	rnaseh2b	89	52.896	ENSMLUG00000004065	-	87	52.399	Myotis_lucifugus
ENSHBUG00000006049	rnaseh2b	100	98.039	ENSNBRG00000003253	rnaseh2b	100	98.039	Neolamprologus_brichardi
ENSHBUG00000006049	rnaseh2b	99	48.208	ENSNLEG00000003804	RNASEH2B	98	48.208	Nomascus_leucogenys
ENSHBUG00000006049	rnaseh2b	91	56.061	ENSMEUG00000003665	RNASEH2B	97	55.674	Notamacropus_eugenii
ENSHBUG00000006049	rnaseh2b	56	48.148	ENSOPRG00000003695	-	51	50.617	Ochotona_princeps
ENSHBUG00000006049	rnaseh2b	85	45.339	ENSODEG00000005412	-	93	45.815	Octodon_degus
ENSHBUG00000006049	rnaseh2b	93	49.306	ENSODEG00000006793	-	93	49.306	Octodon_degus
ENSHBUG00000006049	rnaseh2b	100	97.386	ENSONIG00000006657	rnaseh2b	100	97.386	Oreochromis_niloticus
ENSHBUG00000006049	rnaseh2b	90	56.738	ENSOANG00000015537	RNASEH2B	97	56.738	Ornithorhynchus_anatinus
ENSHBUG00000006049	rnaseh2b	94	48.148	ENSOCUG00000008904	RNASEH2B	91	47.423	Oryctolagus_cuniculus
ENSHBUG00000006049	rnaseh2b	99	79.470	ENSORLG00000011850	rnaseh2b	100	79.470	Oryzias_latipes
ENSHBUG00000006049	rnaseh2b	99	79.801	ENSORLG00020012081	rnaseh2b	100	79.801	Oryzias_latipes_hni
ENSHBUG00000006049	rnaseh2b	99	79.139	ENSORLG00015015468	rnaseh2b	100	79.139	Oryzias_latipes_hsok
ENSHBUG00000006049	rnaseh2b	99	80.132	ENSOMEG00000012441	rnaseh2b	100	80.132	Oryzias_melastigma
ENSHBUG00000006049	rnaseh2b	89	51.923	ENSOGAG00000016486	RNASEH2B	91	51.471	Otolemur_garnettii
ENSHBUG00000006049	rnaseh2b	91	50.382	ENSOARG00000008701	RNASEH2B	92	50.365	Ovis_aries
ENSHBUG00000006049	rnaseh2b	89	51.923	ENSPPAG00000026374	RNASEH2B	93	47.887	Pan_paniscus
ENSHBUG00000006049	rnaseh2b	89	49.425	ENSPPRG00000012450	RNASEH2B	89	49.084	Panthera_pardus
ENSHBUG00000006049	rnaseh2b	89	49.808	ENSPTIG00000013918	RNASEH2B	97	49.451	Panthera_tigris_altaica
ENSHBUG00000006049	rnaseh2b	89	51.923	ENSPTRG00000005886	RNASEH2B	95	54.032	Pan_troglodytes
ENSHBUG00000006049	rnaseh2b	89	51.538	ENSPANG00000022424	-	96	43.548	Papio_anubis
ENSHBUG00000006049	rnaseh2b	100	67.752	ENSPKIG00000013386	rnaseh2b	100	67.752	Paramormyrops_kingsleyae
ENSHBUG00000006049	rnaseh2b	66	55.135	ENSPSIG00000002224	RNASEH2B	94	52.217	Pelodiscus_sinensis
ENSHBUG00000006049	rnaseh2b	69	76.263	ENSPMGG00000010299	rnaseh2b	96	76.263	Periophthalmus_magnuspinnatus
ENSHBUG00000006049	rnaseh2b	89	53.307	ENSPEMG00000019721	Rnaseh2b	87	53.137	Peromyscus_maniculatus_bairdii
ENSHBUG00000006049	rnaseh2b	97	54.412	ENSPCIG00000014535	-	92	54.779	Phascolarctos_cinereus
ENSHBUG00000006049	rnaseh2b	100	80.195	ENSPFOG00000016722	rnaseh2b	100	80.195	Poecilia_formosa
ENSHBUG00000006049	rnaseh2b	100	80.392	ENSPLAG00000011755	rnaseh2b	100	80.392	Poecilia_latipinna
ENSHBUG00000006049	rnaseh2b	100	80.719	ENSPMEG00000002721	rnaseh2b	100	80.719	Poecilia_mexicana
ENSHBUG00000006049	rnaseh2b	100	81.046	ENSPREG00000007737	rnaseh2b	100	81.046	Poecilia_reticulata
ENSHBUG00000006049	rnaseh2b	89	51.923	ENSPPYG00000005378	RNASEH2B	87	51.471	Pongo_abelii
ENSHBUG00000006049	rnaseh2b	89	50.388	ENSPCOG00000026623	RNASEH2B	87	50.000	Propithecus_coquereli
ENSHBUG00000006049	rnaseh2b	84	48.729	ENSPVAG00000000508	RNASEH2B	89	48.729	Pteropus_vampyrus
ENSHBUG00000006049	rnaseh2b	100	99.673	ENSPNYG00000013552	rnaseh2b	100	99.673	Pundamilia_nyererei
ENSHBUG00000006049	rnaseh2b	99	68.954	ENSPNAG00000024825	rnaseh2b	99	68.954	Pygocentrus_nattereri
ENSHBUG00000006049	rnaseh2b	93	51.311	ENSRNOG00000009192	Rnaseh2b	87	51.673	Rattus_norvegicus
ENSHBUG00000006049	rnaseh2b	91	44.275	ENSRBIG00000036017	-	86	44.697	Rhinopithecus_bieti
ENSHBUG00000006049	rnaseh2b	89	51.751	ENSRBIG00000028928	-	87	51.301	Rhinopithecus_bieti
ENSHBUG00000006049	rnaseh2b	76	39.810	ENSRROG00000044915	-	79	39.810	Rhinopithecus_roxellana
ENSHBUG00000006049	rnaseh2b	89	51.751	ENSRROG00000018808	-	87	51.301	Rhinopithecus_roxellana
ENSHBUG00000006049	rnaseh2b	89	51.751	ENSSBOG00000008081	RNASEH2B	96	51.301	Saimiri_boliviensis_boliviensis
ENSHBUG00000006049	rnaseh2b	100	53.548	ENSSHAG00000016190	RNASEH2B	100	54.221	Sarcophilus_harrisii
ENSHBUG00000006049	rnaseh2b	99	69.935	ENSSFOG00015010190	rnaseh2b	100	69.935	Scleropages_formosus
ENSHBUG00000006049	rnaseh2b	100	81.373	ENSSMAG00000001546	rnaseh2b	100	81.373	Scophthalmus_maximus
ENSHBUG00000006049	rnaseh2b	100	84.967	ENSSDUG00000007567	rnaseh2b	100	84.967	Seriola_dumerili
ENSHBUG00000006049	rnaseh2b	100	82.085	ENSSLDG00000012485	rnaseh2b	100	82.085	Seriola_lalandi_dorsalis
ENSHBUG00000006049	rnaseh2b	90	56.322	ENSSPUG00000006745	-	94	56.322	Sphenodon_punctatus
ENSHBUG00000006049	rnaseh2b	100	85.294	ENSSPAG00000020926	rnaseh2b	100	85.294	Stegastes_partitus
ENSHBUG00000006049	rnaseh2b	89	51.163	ENSSSCG00000024385	RNASEH2B	95	53.252	Sus_scrofa
ENSHBUG00000006049	rnaseh2b	90	62.452	ENSTGUG00000012104	RNASEH2B	100	62.271	Taeniopygia_guttata
ENSHBUG00000006049	rnaseh2b	100	78.431	ENSTRUG00000015098	rnaseh2b	100	78.431	Takifugu_rubripes
ENSHBUG00000006049	rnaseh2b	100	76.948	ENSTNIG00000013861	rnaseh2b	100	76.948	Tetraodon_nigroviridis
ENSHBUG00000006049	rnaseh2b	89	43.411	ENSTTRG00000010761	RNASEH2B	87	44.074	Tursiops_truncatus
ENSHBUG00000006049	rnaseh2b	89	51.362	ENSUAMG00000022849	RNASEH2B	96	50.929	Ursus_americanus
ENSHBUG00000006049	rnaseh2b	89	50.584	ENSUMAG00000018556	RNASEH2B	96	50.186	Ursus_maritimus
ENSHBUG00000006049	rnaseh2b	89	51.562	ENSVPAG00000005679	RNASEH2B	93	51.119	Vicugna_pacos
ENSHBUG00000006049	rnaseh2b	89	50.584	ENSVVUG00000024015	RNASEH2B	80	50.929	Vulpes_vulpes
ENSHBUG00000006049	rnaseh2b	99	54.221	ENSXETG00000020720	rnaseh2b	100	54.221	Xenopus_tropicalis
ENSHBUG00000006049	rnaseh2b	100	80.272	ENSXCOG00000018732	rnaseh2b	100	80.272	Xiphophorus_couchianus
ENSHBUG00000006049	rnaseh2b	100	81.373	ENSXMAG00000022554	rnaseh2b	100	81.373	Xiphophorus_maculatus