EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHBUG00000006134 (Gene tree)
Gene ID
102298035
Gene Symbol
pabpc1l
Alias
fi20g03|wu:fi20g03|zgc:55855
Full Name
embryonic polyadenylate-binding protein-like
Gene Type
protein_coding
Species
Haplochromis_burtoni
Status
putative
Strand
Minus strand
Length
13767 bases
Position
chrJH425456.1:454135-467901
Accession
102298035
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHBUP00000024564PABPPF00658.182.9e-2911
ENSHBUP00000004736PABPPF00658.183.6e-2911
ENSHBUP00000004750PABPPF00658.183.7e-2911
ENSHBUP00000024564RRM_5PF13893.65.2e-0912
ENSHBUP00000024564RRM_5PF13893.65.2e-0922
ENSHBUP00000004736RRM_5PF13893.68.9e-0912
ENSHBUP00000004736RRM_5PF13893.68.9e-0922
ENSHBUP00000004750RRM_5PF13893.61.3e-0812
ENSHBUP00000004750RRM_5PF13893.61.3e-0822
ENSHBUP00000024564RRM_1PF00076.228.5e-8914
ENSHBUP00000024564RRM_1PF00076.228.5e-8924
ENSHBUP00000024564RRM_1PF00076.228.5e-8934
ENSHBUP00000024564RRM_1PF00076.228.5e-8944
ENSHBUP00000004750RRM_1PF00076.221.2e-8814
ENSHBUP00000004750RRM_1PF00076.221.2e-8824
ENSHBUP00000004750RRM_1PF00076.221.2e-8834
ENSHBUP00000004750RRM_1PF00076.221.2e-8844
ENSHBUP00000004736RRM_1PF00076.221.5e-8814
ENSHBUP00000004736RRM_1PF00076.221.5e-8824
ENSHBUP00000004736RRM_1PF00076.221.5e-8834
ENSHBUP00000004736RRM_1PF00076.221.5e-8844
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHBUT00000008188-2144XM_014336617ENSHBUP00000004736626 (aa)XP_014192103UPI0003BCB64D
ENSHBUT00000008170-2231XM_005931761ENSHBUP00000004750655 (aa)XP_005931823UPI0003BDB4B5
ENSHBUT00000008215-1695-ENSHBUP00000024564564 (aa)--
Gene Model
Click here to download ENSHBUG00000006134's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000006134's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHBUG00000006134pabpc1l6630.263ENSHBUG00000009691elavl48430.464
ENSHBUG00000006134pabpc1l6630.000ENSHBUG00000005968ELAVL29330.000
ENSHBUG00000006134pabpc1l5336.047ENSHBUG00000021618celf47034.247
ENSHBUG00000006134pabpc1l6134.884ENSHBUG00000003367celf3b8631.897
ENSHBUG00000006134pabpc1l5437.209ENSHBUG00000001878si:dkey-205h23.28235.789
ENSHBUG00000006134pabpc1l6843.529ENSHBUG00000006158rbm39b5343.529
ENSHBUG00000006134pabpc1l9965.827ENSHBUG00000020206pabpc49766.509
ENSHBUG00000006134pabpc1l5933.333ENSHBUG00000006869ncl5033.333
ENSHBUG00000006134pabpc1l6640.789ENSHBUG00000009047rbm196740.789
ENSHBUG00000006134pabpc1l6337.079ENSHBUG00000007897elavl1a8837.079
ENSHBUG00000006134pabpc1l9970.980ENSHBUG00000020487pabpc1a9878.022
ENSHBUG00000006134pabpc1l5531.548ENSHBUG00000023867-7831.548
ENSHBUG00000006134pabpc1l6633.663ENSHBUG00000021196rbms35733.663
ENSHBUG00000006134pabpc1l9969.640ENSHBUG00000002075pabpc1b9869.640
ENSHBUG00000006134pabpc1l5337.209ENSHBUG00000006465celf5a6036.735
ENSHBUG00000006134pabpc1l5434.884ENSHBUG00000001061celf3a6334.884
ENSHBUG00000006134pabpc1l6538.122ENSHBUG00000002028sf3b46540.123
ENSHBUG00000006134pabpc1l6631.548ENSHBUG00000023154-7031.548
ENSHBUG00000006134pabpc1l6532.967ENSHBUG00000007503-9832.967
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHBUG00000006134pabpc1l9967.353ENSG00000101104PABPC1L9976.235Homo_sapiens
ENSHBUG00000006134pabpc1l9983.762ENSAPOG00000010842pabpc1l9983.762Acanthochromis_polyacanthus
ENSHBUG00000006134pabpc1l8976.627ENSAMEG00000004099PABPC1L10063.190Ailuropoda_melanoleuca
ENSHBUG00000006134pabpc1l10093.780ENSACIG00000021004-10094.313Amphilophus_citrinellus
ENSHBUG00000006134pabpc1l10087.061ENSAOCG00000006167-10087.061Amphiprion_ocellaris
ENSHBUG00000006134pabpc1l10085.623ENSAPEG00000010558-10089.183Amphiprion_percula
ENSHBUG00000006134pabpc1l10087.917ENSATEG00000007428pabpc1l10088.553Anabas_testudineus
ENSHBUG00000006134pabpc1l9871.840ENSAPLG00000008415PABPC1L9971.791Anas_platyrhynchos
ENSHBUG00000006134pabpc1l9974.250ENSACAG00000011841PABPC1L9974.250Anolis_carolinensis
ENSHBUG00000006134pabpc1l9967.572ENSANAG00000026826PABPC1L9967.572Aotus_nancymaae
ENSHBUG00000006134pabpc1l10099.521ENSACLG00000024791pabpc1l10099.521Astatotilapia_calliptera
ENSHBUG00000006134pabpc1l10080.445ENSAMXG00000013552pabpc1l10080.445Astyanax_mexicanus
ENSHBUG00000006134pabpc1l6886.905ENSBTAG00000055300-10086.905Bos_taurus
ENSHBUG00000006134pabpc1l7362.544ENSBTAG00000016849PABPC1L8960.751Bos_taurus
ENSHBUG00000006134pabpc1l9967.732ENSCJAG00000017628PABPC1L9967.732Callithrix_jacchus
ENSHBUG00000006134pabpc1l6581.034ENSCJAG00000038506-10081.034Callithrix_jacchus
ENSHBUG00000006134pabpc1l9176.179ENSCAFG00000009573PABPC1L10063.524Canis_familiaris
ENSHBUG00000006134pabpc1l9967.091ENSCAFG00020013828PABPC1L9967.091Canis_lupus_dingo
ENSHBUG00000006134pabpc1l9866.558ENSCHIG00000025759PABPC1L9166.181Capra_hircus
ENSHBUG00000006134pabpc1l9966.613ENSTSYG00000006645PABPC1L9966.613Carlito_syrichta
ENSHBUG00000006134pabpc1l9861.236ENSCAPG00000014519PABPC1L9961.236Cavia_aperea
ENSHBUG00000006134pabpc1l9963.752ENSCPOG00000013633PABPC1L9963.752Cavia_porcellus
ENSHBUG00000006134pabpc1l9966.509ENSCCAG00000023338PABPC1L9967.572Cebus_capucinus
ENSHBUG00000006134pabpc1l9967.891ENSCATG00000034065PABPC1L9967.891Cercocebus_atys
ENSHBUG00000006134pabpc1l9963.116ENSCLAG00000005298PABPC1L9963.694Chinchilla_lanigera
ENSHBUG00000006134pabpc1l9967.732ENSCSAG00000014242PABPC1L9967.732Chlorocebus_sabaeus
ENSHBUG00000006134pabpc1l7679.215ENSCPBG00000017755-9979.864Chrysemys_picta_bellii
ENSHBUG00000006134pabpc1l6185.496ENSCPBG00000007810-9185.496Chrysemys_picta_bellii
ENSHBUG00000006134pabpc1l6871.591ENSCING00000002796-9750.000Ciona_intestinalis
ENSHBUG00000006134pabpc1l9964.608ENSCSAVG00000003102-10085.714Ciona_savignyi
ENSHBUG00000006134pabpc1l9961.592ENSCSAVG00000004246-8971.523Ciona_savignyi
ENSHBUG00000006134pabpc1l9965.865ENSCANG00000037530PABPC1L9965.865Colobus_angolensis_palliatus
ENSHBUG00000006134pabpc1l9959.738ENSCGRG00001021938Pabpc1l9959.738Cricetulus_griseus_chok1gshd
ENSHBUG00000006134pabpc1l9959.738ENSCGRG00000007946Pabpc1l9959.738Cricetulus_griseus_crigri
ENSHBUG00000006134pabpc1l9981.139ENSCSEG00000021295pabpc1l9981.139Cynoglossus_semilaevis
ENSHBUG00000006134pabpc1l10088.869ENSCVAG00000015943-9996.947Cyprinodon_variegatus
ENSHBUG00000006134pabpc1l9978.628ENSDARG00000002597pabpc1l8895.385Danio_rerio
ENSHBUG00000006134pabpc1l9967.783ENSDNOG00000048450PABPC1L9967.783Dasypus_novemcinctus
ENSHBUG00000006134pabpc1l9964.960ENSDORG00000001067Pabpc1l9964.960Dipodomys_ordii
ENSHBUG00000006134pabpc1l9576.016ENSETEG00000009969PABPC1L7276.016Echinops_telfairi
ENSHBUG00000006134pabpc1l6263.235ENSEASG00005023407-8263.235Equus_asinus_asinus
ENSHBUG00000006134pabpc1l6884.524ENSEASG00005023408-10084.524Equus_asinus_asinus
ENSHBUG00000006134pabpc1l7166.518ENSECAG00000040139-8168.000Equus_caballus
ENSHBUG00000006134pabpc1l9965.815ENSEEUG00000005978PABPC1L9965.815Erinaceus_europaeus
ENSHBUG00000006134pabpc1l10080.445ENSELUG00000001811pabpc1l10080.445Esox_lucius
ENSHBUG00000006134pabpc1l9967.840ENSFCAG00000011692PABPC1L9967.840Felis_catus
ENSHBUG00000006134pabpc1l8672.007ENSFALG00000005372PABPC1L9868.151Ficedula_albicollis
ENSHBUG00000006134pabpc1l9964.815ENSFDAG00000008291PABPC1L9964.815Fukomys_damarensis
ENSHBUG00000006134pabpc1l10088.978ENSFHEG00000003398pabpc1l10088.978Fundulus_heteroclitus
ENSHBUG00000006134pabpc1l9982.588ENSGMOG00000004437pabpc1l9982.588Gadus_morhua
ENSHBUG00000006134pabpc1l9571.667ENSGALG00000004123PABPC1L9980.048Gallus_gallus
ENSHBUG00000006134pabpc1l10086.495ENSGAFG00000021057pabpc1l10086.495Gambusia_affinis
ENSHBUG00000006134pabpc1l9986.741ENSGACG00000002792pabpc1l10086.741Gasterosteus_aculeatus
ENSHBUG00000006134pabpc1l9974.113ENSGAGG00000000589PABPC1L9874.113Gopherus_agassizii
ENSHBUG00000006134pabpc1l9967.353ENSGGOG00000004584PABPC1L9967.353Gorilla_gorilla
ENSHBUG00000006134pabpc1l10064.297ENSHGLG00000008434PABPC1L9964.613Heterocephalus_glaber_female
ENSHBUG00000006134pabpc1l6487.079ENSHGLG00100019506-10087.079Heterocephalus_glaber_male
ENSHBUG00000006134pabpc1l10064.297ENSHGLG00100012151PABPC1L9964.613Heterocephalus_glaber_male
ENSHBUG00000006134pabpc1l9987.022ENSHCOG00000009270pabpc1l10087.022Hippocampus_comes
ENSHBUG00000006134pabpc1l6562.011ENSIPUG00000006780-8762.011Ictalurus_punctatus
ENSHBUG00000006134pabpc1l10079.014ENSIPUG00000012602pabpc1l10079.014Ictalurus_punctatus
ENSHBUG00000006134pabpc1l6561.878ENSIPUG00000006760-9161.878Ictalurus_punctatus
ENSHBUG00000006134pabpc1l9966.773ENSSTOG00000003739PABPC1L9966.773Ictidomys_tridecemlineatus
ENSHBUG00000006134pabpc1l9951.681ENSJJAG00000022406Pabpc1l9950.478Jaculus_jaculus
ENSHBUG00000006134pabpc1l10087.540ENSKMAG00000016847pabpc1l10087.540Kryptolebias_marmoratus
ENSHBUG00000006134pabpc1l10089.297ENSLBEG00000010084pabpc1l10089.297Labrus_bergylta
ENSHBUG00000006134pabpc1l9972.057ENSLACG00000005762PABPC1L9973.309Latimeria_chalumnae
ENSHBUG00000006134pabpc1l9980.349ENSLOCG00000007519pabpc1l9980.349Lepisosteus_oculatus
ENSHBUG00000006134pabpc1l9966.614ENSLAFG00000003553PABPC1L10066.614Loxodonta_africana
ENSHBUG00000006134pabpc1l9968.211ENSMFAG00000040365PABPC1L9968.211Macaca_fascicularis
ENSHBUG00000006134pabpc1l9967.412ENSMNEG00000032298PABPC1L9967.412Macaca_nemestrina
ENSHBUG00000006134pabpc1l9967.891ENSMLEG00000043139PABPC1L9967.891Mandrillus_leucophaeus
ENSHBUG00000006134pabpc1l9789.786ENSMAMG00000011854pabpc1l9789.786Mastacembelus_armatus
ENSHBUG00000006134pabpc1l10099.521ENSMZEG00005023713pabpc1l10099.521Maylandia_zebra
ENSHBUG00000006134pabpc1l9972.496ENSMGAG00000003674PABPC1L9972.496Meleagris_gallopavo
ENSHBUG00000006134pabpc1l9959.247ENSMOCG00000013186Pabpc1l9959.247Microtus_ochrogaster
ENSHBUG00000006134pabpc1l9987.520ENSMMOG00000020574-9987.520Mola_mola
ENSHBUG00000006134pabpc1l9769.593ENSMODG00000016198PABPC1L9969.593Monodelphis_domestica
ENSHBUG00000006134pabpc1l9987.634ENSMALG00000021622pabpc1l10089.127Monopterus_albus
ENSHBUG00000006134pabpc1l9959.539MGP_CAROLIEiJ_G0024627Pabpc1l9959.539Mus_caroli
ENSHBUG00000006134pabpc1l9960.191ENSMUSG00000054582Pabpc1l9960.191Mus_musculus
ENSHBUG00000006134pabpc1l10059.306MGP_PahariEiJ_G0026071Pabpc1l10059.242Mus_pahari
ENSHBUG00000006134pabpc1l9959.539MGP_SPRETEiJ_G0025549Pabpc1l9959.539Mus_spretus
ENSHBUG00000006134pabpc1l9968.160ENSMPUG00000017646PABPC1L9968.160Mustela_putorius_furo
ENSHBUG00000006134pabpc1l9864.659ENSMLUG00000006324PABPC1L9864.659Myotis_lucifugus
ENSHBUG00000006134pabpc1l9961.392ENSNGAG00000010458Pabpc1l9961.392Nannospalax_galili
ENSHBUG00000006134pabpc1l10098.562ENSNBRG00000016633pabpc1l10098.562Neolamprologus_brichardi
ENSHBUG00000006134pabpc1l9064.362ENSMEUG00000007905-8964.825Notamacropus_eugenii
ENSHBUG00000006134pabpc1l9966.933ENSOPRG00000011846PABPC1L9966.933Ochotona_princeps
ENSHBUG00000006134pabpc1l9963.748ENSODEG00000015482PABPC1L9963.748Octodon_degus
ENSHBUG00000006134pabpc1l6381.250ENSODEG00000002920-9781.250Octodon_degus
ENSHBUG00000006134pabpc1l10098.882ENSONIG00000017314pabpc1l10098.882Oreochromis_niloticus
ENSHBUG00000006134pabpc1l9061.579ENSOANG00000015793-10061.579Ornithorhynchus_anatinus
ENSHBUG00000006134pabpc1l9963.553ENSOCUG00000003005PABPC1L9964.012Oryctolagus_cuniculus
ENSHBUG00000006134pabpc1l10086.581ENSORLG00000010322pabpc1l10089.486Oryzias_latipes
ENSHBUG00000006134pabpc1l10086.422ENSORLG00020021193pabpc1l10089.486Oryzias_latipes_hni
ENSHBUG00000006134pabpc1l10086.422ENSORLG00015017018pabpc1l10089.486Oryzias_latipes_hsok
ENSHBUG00000006134pabpc1l10086.412ENSOMEG00000010789pabpc1l10086.412Oryzias_melastigma
ENSHBUG00000006134pabpc1l9966.613ENSOGAG00000032999PABPC1L9966.613Otolemur_garnettii
ENSHBUG00000006134pabpc1l9967.093ENSOARG00000004578PABPC1L9967.093Ovis_aries
ENSHBUG00000006134pabpc1l9967.512ENSPPAG00000039677PABPC1L9967.512Pan_paniscus
ENSHBUG00000006134pabpc1l6867.284ENSPPRG00000019327-9867.593Panthera_pardus
ENSHBUG00000006134pabpc1l9867.690ENSPTIG00000006524PABPC1L9967.690Panthera_tigris_altaica
ENSHBUG00000006134pabpc1l7776.543ENSPTRG00000013531PABPC1L9976.543Pan_troglodytes
ENSHBUG00000006134pabpc1l9967.891ENSPANG00000018788PABPC1L9967.891Papio_anubis
ENSHBUG00000006134pabpc1l5884.733ENSPKIG00000016810-9384.733Paramormyrops_kingsleyae
ENSHBUG00000006134pabpc1l10079.048ENSPKIG00000007322pabpc1l10079.048Paramormyrops_kingsleyae
ENSHBUG00000006134pabpc1l7381.598ENSPSIG00000013289PABPC1L9981.295Pelodiscus_sinensis
ENSHBUG00000006134pabpc1l6896.212ENSPMGG00000023117pabpc1l9794.419Periophthalmus_magnuspinnatus
ENSHBUG00000006134pabpc1l7290.741ENSPMGG00000023121-9185.641Periophthalmus_magnuspinnatus
ENSHBUG00000006134pabpc1l9958.202ENSPEMG00000020671Pabpc1l9958.833Peromyscus_maniculatus_bairdii
ENSHBUG00000006134pabpc1l10088.658ENSPFOG00000013241pabpc1l10088.658Poecilia_formosa
ENSHBUG00000006134pabpc1l6898.462ENSPLAG00000023686-9298.462Poecilia_latipinna
ENSHBUG00000006134pabpc1l10088.498ENSPLAG00000017490-10088.498Poecilia_latipinna
ENSHBUG00000006134pabpc1l10088.658ENSPMEG00000007677pabpc1l10088.658Poecilia_mexicana
ENSHBUG00000006134pabpc1l6898.462ENSPMEG00000009185-8898.462Poecilia_mexicana
ENSHBUG00000006134pabpc1l7394.903ENSPREG00000015886pabpc1l10094.903Poecilia_reticulata
ENSHBUG00000006134pabpc1l9967.891ENSPPYG00000011042PABPC1L9967.891Pongo_abelii
ENSHBUG00000006134pabpc1l6784.375ENSPCAG00000011787-7584.375Procavia_capensis
ENSHBUG00000006134pabpc1l9968.051ENSPCOG00000020630PABPC1L9968.051Propithecus_coquereli
ENSHBUG00000006134pabpc1l9965.760ENSPVAG00000012663PABPC1L9965.760Pteropus_vampyrus
ENSHBUG00000006134pabpc1l9996.056ENSPNYG00000004101pabpc1l10096.056Pundamilia_nyererei
ENSHBUG00000006134pabpc1l10072.655ENSPNAG00000021248pabpc1l10072.655Pygocentrus_nattereri
ENSHBUG00000006134pabpc1l9960.133ENSRNOG00000012750Pabpc1l9960.299Rattus_norvegicus
ENSHBUG00000006134pabpc1l9967.732ENSRBIG00000035381PABPC1L9967.732Rhinopithecus_bieti
ENSHBUG00000006134pabpc1l9967.572ENSRROG00000044498PABPC1L9967.572Rhinopithecus_roxellana
ENSHBUG00000006134pabpc1l9967.572ENSSBOG00000009532-9967.572Saimiri_boliviensis_boliviensis
ENSHBUG00000006134pabpc1l9864.242ENSSHAG00000011446PABPC1L10064.242Sarcophilus_harrisii
ENSHBUG00000006134pabpc1l10078.889ENSSFOG00015017304pabpc1l10078.889Scleropages_formosus
ENSHBUG00000006134pabpc1l10088.019ENSSMAG00000010516pabpc1l9898.450Scophthalmus_maximus
ENSHBUG00000006134pabpc1l10090.256ENSSDUG00000014743pabpc1l10090.256Seriola_dumerili
ENSHBUG00000006134pabpc1l9788.119ENSSLDG00000006981pabpc1l9893.151Seriola_lalandi_dorsalis
ENSHBUG00000006134pabpc1l9972.354ENSSPUG00000004233PABPC1L9972.354Sphenodon_punctatus
ENSHBUG00000006134pabpc1l10082.124ENSSPAG00000017137pabpc1l10082.124Stegastes_partitus
ENSHBUG00000006134pabpc1l9968.262ENSSSCG00000007382PABPC1L9968.262Sus_scrofa
ENSHBUG00000006134pabpc1l9971.630ENSTGUG00000005114PABPC1L9971.473Taeniopygia_guttata
ENSHBUG00000006134pabpc1l9786.985ENSTRUG00000011085pabpc1l9786.985Takifugu_rubripes
ENSHBUG00000006134pabpc1l9985.048ENSTNIG00000017903pabpc1l9885.048Tetraodon_nigroviridis
ENSHBUG00000006134pabpc1l9477.055ENSTBEG00000002851PABPC1L7977.055Tupaia_belangeri
ENSHBUG00000006134pabpc1l9465.320ENSTTRG00000007618PABPC1L10065.574Tursiops_truncatus
ENSHBUG00000006134pabpc1l9967.116ENSUAMG00000017682PABPC1L9967.116Ursus_americanus
ENSHBUG00000006134pabpc1l7372.652ENSUMAG00000025436PABPC1L9372.652Ursus_maritimus
ENSHBUG00000006134pabpc1l9875.494ENSVVUG00000018939PABPC1L9875.494Vulpes_vulpes
ENSHBUG00000006134pabpc1l9970.253ENSXETG00000022831pabpc1l9970.253Xenopus_tropicalis
ENSHBUG00000006134pabpc1l10087.220ENSXCOG00000005459pabpc1l9993.617Xiphophorus_couchianus
ENSHBUG00000006134pabpc1l10088.179ENSXMAG00000017135pabpc1l10088.179Xiphophorus_maculatus

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