EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000006188 (Gene tree)
Gene ID: 102302982
Gene Symbol: swt1
Alias: si:dkeyp-11g8.2|si:dkeyp-11g8.4|wu:fb81g09
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 22891 bases
Position: chrJH425570.1:9208-32098
Accession: 102302982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000004853	PIN_4	PF13638.6	4e-30	1	1
ENSHBUP00000004863	PIN_4	PF13638.6	4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000007985	-	2970	-	ENSHBUP00000004863	830 (aa)	-	UPI0003BD592E
ENSHBUT00000007995	-	2755	XM_005938497	ENSHBUP00000004853	830 (aa)	XP_005938559	UPI0003BD592E

Gene Model

Click here to download ENSHBUG00000006188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000006188's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000006188	swt1	67	32.823	ENSG00000116668	SWT1	60	32.823	Homo_sapiens
ENSHBUG00000006188	swt1	98	69.930	ENSAPOG00000014897	-	86	69.930	Acanthochromis_polyacanthus
ENSHBUG00000006188	swt1	68	33.056	ENSAMEG00000013585	SWT1	62	33.278	Ailuropoda_melanoleuca
ENSHBUG00000006188	swt1	98	61.863	ENSAOCG00000013932	swt1	97	61.863	Amphiprion_ocellaris
ENSHBUG00000006188	swt1	98	62.009	ENSAPEG00000009613	-	97	62.009	Amphiprion_percula
ENSHBUG00000006188	swt1	98	66.725	ENSATEG00000018946	swt1	85	65.664	Anabas_testudineus
ENSHBUG00000006188	swt1	67	36.887	ENSAPLG00000008607	SWT1	75	36.860	Anas_platyrhynchos
ENSHBUG00000006188	swt1	67	35.788	ENSACAG00000002276	SWT1	63	35.445	Anolis_carolinensis
ENSHBUG00000006188	swt1	68	33.333	ENSANAG00000027068	SWT1	61	33.672	Aotus_nancymaae
ENSHBUG00000006188	swt1	96	99.373	ENSACLG00000009742	swt1	100	99.373	Astatotilapia_calliptera
ENSHBUG00000006188	swt1	70	46.218	ENSAMXG00000010971	swt1	59	46.701	Astyanax_mexicanus
ENSHBUG00000006188	swt1	68	32.215	ENSCJAG00000005544	SWT1	61	32.550	Callithrix_jacchus
ENSHBUG00000006188	swt1	68	33.277	ENSCAFG00000013543	SWT1	62	33.391	Canis_familiaris
ENSHBUG00000006188	swt1	68	33.277	ENSCAFG00020015648	SWT1	65	33.445	Canis_lupus_dingo
ENSHBUG00000006188	swt1	68	32.773	ENSCHIG00000023511	SWT1	95	32.280	Capra_hircus
ENSHBUG00000006188	swt1	69	32.609	ENSTSYG00000010470	SWT1	62	32.441	Carlito_syrichta
ENSHBUG00000006188	swt1	66	31.561	ENSCPOG00000014251	SWT1	71	30.744	Cavia_porcellus
ENSHBUG00000006188	swt1	68	33.672	ENSCCAG00000033926	SWT1	61	34.010	Cebus_capucinus
ENSHBUG00000006188	swt1	68	33.055	ENSCATG00000042210	SWT1	95	33.389	Cercocebus_atys
ENSHBUG00000006188	swt1	73	32.437	ENSCLAG00000013959	SWT1	67	31.962	Chinchilla_lanigera
ENSHBUG00000006188	swt1	67	32.653	ENSCSAG00000012895	SWT1	60	32.993	Chlorocebus_sabaeus
ENSHBUG00000006188	swt1	68	35.786	ENSCPBG00000015691	SWT1	62	36.000	Chrysemys_picta_bellii
ENSHBUG00000006188	swt1	71	32.212	ENSCANG00000032207	SWT1	95	33.054	Colobus_angolensis_palliatus
ENSHBUG00000006188	swt1	73	32.283	ENSCGRG00001022955	Swt1	69	32.283	Cricetulus_griseus_chok1gshd
ENSHBUG00000006188	swt1	73	32.283	ENSCGRG00000010224	Swt1	67	32.283	Cricetulus_griseus_crigri
ENSHBUG00000006188	swt1	76	58.295	ENSCSEG00000017352	swt1	84	57.566	Cynoglossus_semilaevis
ENSHBUG00000006188	swt1	67	47.803	ENSDARG00000094010	swt1	69	42.446	Danio_rerio
ENSHBUG00000006188	swt1	67	32.823	ENSDNOG00000005254	SWT1	58	33.911	Dasypus_novemcinctus
ENSHBUG00000006188	swt1	68	31.658	ENSDORG00000010531	Swt1	66	32.328	Dipodomys_ordii
ENSHBUG00000006188	swt1	78	30.781	ENSEASG00005005530	SWT1	75	30.781	Equus_asinus_asinus
ENSHBUG00000006188	swt1	67	51.468	ENSELUG00000020565	swt1	56	51.979	Esox_lucius
ENSHBUG00000006188	swt1	68	32.826	ENSFCAG00000011286	SWT1	62	32.657	Felis_catus
ENSHBUG00000006188	swt1	68	34.899	ENSFALG00000003206	SWT1	62	34.899	Ficedula_albicollis
ENSHBUG00000006188	swt1	68	32.609	ENSFDAG00000007569	SWT1	62	32.609	Fukomys_damarensis
ENSHBUG00000006188	swt1	67	35.726	ENSGALG00000034230	SWT1	63	35.726	Gallus_gallus
ENSHBUG00000006188	swt1	86	63.066	ENSGAFG00000007803	-	79	61.847	Gambusia_affinis
ENSHBUG00000006188	swt1	68	35.544	ENSGAGG00000025050	SWT1	96	35.544	Gopherus_agassizii
ENSHBUG00000006188	swt1	65	32.979	ENSGGOG00000041167	-	95	32.979	Gorilla_gorilla
ENSHBUG00000006188	swt1	67	34.359	ENSHGLG00000006542	SWT1	64	34.477	Heterocephalus_glaber_female
ENSHBUG00000006188	swt1	67	34.477	ENSHGLG00100014408	SWT1	62	34.477	Heterocephalus_glaber_male
ENSHBUG00000006188	swt1	66	38.863	ENSHCOG00000016930	-	86	39.659	Hippocampus_comes
ENSHBUG00000006188	swt1	68	46.087	ENSIPUG00000009113	-	58	46.087	Ictalurus_punctatus
ENSHBUG00000006188	swt1	68	32.712	ENSSTOG00000010356	SWT1	62	32.712	Ictidomys_tridecemlineatus
ENSHBUG00000006188	swt1	67	34.075	ENSJJAG00000015927	Swt1	64	34.075	Jaculus_jaculus
ENSHBUG00000006188	swt1	100	66.200	ENSKMAG00000012533	swt1	81	66.025	Kryptolebias_marmoratus
ENSHBUG00000006188	swt1	95	65.954	ENSLBEG00000020663	-	84	65.954	Labrus_bergylta
ENSHBUG00000006188	swt1	69	35.798	ENSLACG00000009194	SWT1	81	35.798	Latimeria_chalumnae
ENSHBUG00000006188	swt1	66	43.174	ENSLOCG00000001749	swt1	100	42.707	Lepisosteus_oculatus
ENSHBUG00000006188	swt1	68	31.605	ENSLAFG00000004346	-	95	31.605	Loxodonta_africana
ENSHBUG00000006188	swt1	68	32.721	ENSMFAG00000031793	SWT1	95	33.055	Macaca_fascicularis
ENSHBUG00000006188	swt1	67	32.368	ENSMMUG00000013882	SWT1	94	32.709	Macaca_mulatta
ENSHBUG00000006188	swt1	68	32.721	ENSMNEG00000035502	SWT1	95	33.055	Macaca_nemestrina
ENSHBUG00000006188	swt1	68	33.055	ENSMLEG00000038692	SWT1	95	33.055	Mandrillus_leucophaeus
ENSHBUG00000006188	swt1	100	99.398	ENSMZEG00005018489	swt1	100	99.398	Maylandia_zebra
ENSHBUG00000006188	swt1	67	35.775	ENSMGAG00000000973	SWT1	94	35.094	Meleagris_gallopavo
ENSHBUG00000006188	swt1	68	30.329	ENSMAUG00000007996	Swt1	58	30.915	Mesocricetus_auratus
ENSHBUG00000006188	swt1	71	33.279	ENSMICG00000014975	SWT1	64	33.441	Microcebus_murinus
ENSHBUG00000006188	swt1	68	33.558	ENSMOCG00000009776	Swt1	61	33.390	Microtus_ochrogaster
ENSHBUG00000006188	swt1	67	34.083	ENSMODG00000007472	SWT1	59	34.083	Monodelphis_domestica
ENSHBUG00000006188	swt1	98	67.196	ENSMALG00000019308	swt1	85	66.843	Monopterus_albus
ENSHBUG00000006188	swt1	74	32.919	MGP_CAROLIEiJ_G0014692	Swt1	68	42.442	Mus_caroli
ENSHBUG00000006188	swt1	74	32.298	ENSMUSG00000052748	Swt1	68	41.279	Mus_musculus
ENSHBUG00000006188	swt1	68	33.841	MGP_PahariEiJ_G0027928	Swt1	68	41.860	Mus_pahari
ENSHBUG00000006188	swt1	74	32.453	MGP_SPRETEiJ_G0015499	Swt1	68	41.860	Mus_spretus
ENSHBUG00000006188	swt1	68	33.950	ENSMPUG00000011913	SWT1	62	34.118	Mustela_putorius_furo
ENSHBUG00000006188	swt1	72	31.672	ENSMLUG00000001142	SWT1	64	31.029	Myotis_lucifugus
ENSHBUG00000006188	swt1	67	33.449	ENSNGAG00000021080	Swt1	61	33.220	Nannospalax_galili
ENSHBUG00000006188	swt1	68	32.378	ENSNLEG00000018031	SWT1	61	32.715	Nomascus_leucogenys
ENSHBUG00000006188	swt1	100	88.140	ENSONIG00000009994	swt1	100	88.140	Oreochromis_niloticus
ENSHBUG00000006188	swt1	67	33.959	ENSOANG00000001013	-	70	33.447	Ornithorhynchus_anatinus
ENSHBUG00000006188	swt1	68	33.841	ENSOCUG00000004901	SWT1	63	33.672	Oryctolagus_cuniculus
ENSHBUG00000006188	swt1	94	62.087	ENSORLG00000009682	swt1	84	61.458	Oryzias_latipes
ENSHBUG00000006188	swt1	98	62.738	ENSORLG00020011654	swt1	90	62.111	Oryzias_latipes_hni
ENSHBUG00000006188	swt1	91	61.565	ENSORLG00015007734	swt1	79	60.938	Oryzias_latipes_hsok
ENSHBUG00000006188	swt1	97	54.414	ENSOMEG00000006607	swt1	89	53.768	Oryzias_melastigma
ENSHBUG00000006188	swt1	68	32.881	ENSOGAG00000016195	SWT1	62	32.881	Otolemur_garnettii
ENSHBUG00000006188	swt1	68	32.773	ENSOARG00000004156	SWT1	60	32.773	Ovis_aries
ENSHBUG00000006188	swt1	68	32.886	ENSPPAG00000021400	SWT1	61	32.660	Pan_paniscus
ENSHBUG00000006188	swt1	68	33.503	ENSPPRG00000023754	SWT1	62	33.672	Panthera_pardus
ENSHBUG00000006188	swt1	68	33.503	ENSPTIG00000021889	SWT1	62	33.672	Panthera_tigris_altaica
ENSHBUG00000006188	swt1	68	32.598	ENSPTRG00000001777	SWT1	61	32.598	Pan_troglodytes
ENSHBUG00000006188	swt1	68	32.888	ENSPANG00000005099	SWT1	95	33.222	Papio_anubis
ENSHBUG00000006188	swt1	67	49.033	ENSPKIG00000005979	swt1	58	48.601	Paramormyrops_kingsleyae
ENSHBUG00000006188	swt1	68	35.667	ENSPSIG00000008961	SWT1	61	36.181	Pelodiscus_sinensis
ENSHBUG00000006188	swt1	68	33.390	ENSPEMG00000008208	Swt1	61	33.841	Peromyscus_maniculatus_bairdii
ENSHBUG00000006188	swt1	80	30.556	ENSPCIG00000002443	SWT1	72	30.556	Phascolarctos_cinereus
ENSHBUG00000006188	swt1	93	63.368	ENSPFOG00000010988	-	97	50.822	Poecilia_formosa
ENSHBUG00000006188	swt1	93	63.542	ENSPLAG00000022908	-	79	62.457	Poecilia_latipinna
ENSHBUG00000006188	swt1	93	63.368	ENSPMEG00000006943	-	79	62.284	Poecilia_mexicana
ENSHBUG00000006188	swt1	58	63.370	ENSPREG00000014723	-	65	63.370	Poecilia_reticulata
ENSHBUG00000006188	swt1	69	32.831	ENSPPYG00000000415	SWT1	62	33.166	Pongo_abelii
ENSHBUG00000006188	swt1	100	99.639	ENSPNYG00000012934	swt1	100	99.639	Pundamilia_nyererei
ENSHBUG00000006188	swt1	68	46.886	ENSPNAG00000017795	swt1	58	46.967	Pygocentrus_nattereri
ENSHBUG00000006188	swt1	73	32.698	ENSRNOG00000032258	Swt1	79	31.181	Rattus_norvegicus
ENSHBUG00000006188	swt1	68	32.605	ENSRBIG00000040630	SWT1	95	32.605	Rhinopithecus_bieti
ENSHBUG00000006188	swt1	68	32.881	ENSSBOG00000028825	SWT1	62	33.619	Saimiri_boliviensis_boliviensis
ENSHBUG00000006188	swt1	71	33.387	ENSSHAG00000009241	SWT1	64	33.227	Sarcophilus_harrisii
ENSHBUG00000006188	swt1	68	48.193	ENSSFOG00015004895	swt1	56	48.199	Scleropages_formosus
ENSHBUG00000006188	swt1	89	65.674	ENSSMAG00000020761	-	62	65.674	Scophthalmus_maximus
ENSHBUG00000006188	swt1	98	70.087	ENSSDUG00000012345	swt1	85	70.087	Seriola_dumerili
ENSHBUG00000006188	swt1	98	67.384	ENSSLDG00000003821	swt1	88	67.384	Seriola_lalandi_dorsalis
ENSHBUG00000006188	swt1	68	35.500	ENSSPUG00000003899	SWT1	61	35.333	Sphenodon_punctatus
ENSHBUG00000006188	swt1	92	69.739	ENSSPAG00000001030	swt1	85	69.739	Stegastes_partitus
ENSHBUG00000006188	swt1	76	31.908	ENSSSCG00000015569	SWT1	69	32.519	Sus_scrofa
ENSHBUG00000006188	swt1	66	36.568	ENSTGUG00000003718	-	98	36.111	Taeniopygia_guttata
ENSHBUG00000006188	swt1	70	58.685	ENSTRUG00000006420	swt1	63	57.550	Takifugu_rubripes
ENSHBUG00000006188	swt1	69	31.683	ENSTTRG00000005914	SWT1	63	31.848	Tursiops_truncatus
ENSHBUG00000006188	swt1	68	33.667	ENSUAMG00000020937	SWT1	67	33.833	Ursus_americanus
ENSHBUG00000006188	swt1	68	33.667	ENSUMAG00000021918	SWT1	62	33.833	Ursus_maritimus
ENSHBUG00000006188	swt1	61	34.694	ENSVPAG00000011855	SWT1	55	34.694	Vicugna_pacos
ENSHBUG00000006188	swt1	68	33.277	ENSVVUG00000009182	SWT1	64	33.445	Vulpes_vulpes
ENSHBUG00000006188	swt1	93	64.174	ENSXMAG00000023472	-	79	63.130	Xiphophorus_maculatus