EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000006238 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 12735 bases
Position: chrJH425819.1:10237-22971
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000004896	zf-C2H2	PF00096.26	2.1e-42	1	7
ENSHBUP00000004896	zf-C2H2	PF00096.26	2.1e-42	2	7
ENSHBUP00000004896	zf-C2H2	PF00096.26	2.1e-42	3	7
ENSHBUP00000004896	zf-C2H2	PF00096.26	2.1e-42	4	7
ENSHBUP00000004896	zf-C2H2	PF00096.26	2.1e-42	5	7
ENSHBUP00000004896	zf-C2H2	PF00096.26	2.1e-42	6	7
ENSHBUP00000004896	zf-C2H2	PF00096.26	2.1e-42	7	7
ENSHBUP00000004896	zf-met	PF12874.7	1.7e-11	1	3
ENSHBUP00000004896	zf-met	PF12874.7	1.7e-11	2	3
ENSHBUP00000004896	zf-met	PF12874.7	1.7e-11	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000007918	-	858	-	ENSHBUP00000004896	285 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000006238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000006238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000006238	-	93	38.318	ENSHBUG00000004077	-	94	38.318
ENSHBUG00000006238	-	94	40.291	ENSHBUG00000013490	-	80	40.291
ENSHBUG00000006238	-	95	38.554	ENSHBUG00000000636	-	61	36.567
ENSHBUG00000006238	-	93	36.036	ENSHBUG00000009815	znf319b	93	32.919
ENSHBUG00000006238	-	96	38.554	ENSHBUG00000016546	-	67	38.554
ENSHBUG00000006238	-	92	40.517	ENSHBUG00000002393	-	54	40.517
ENSHBUG00000006238	-	93	32.292	ENSHBUG00000005726	-	55	32.292
ENSHBUG00000006238	-	93	41.722	ENSHBUG00000006662	-	64	41.722
ENSHBUG00000006238	-	93	43.709	ENSHBUG00000017869	-	73	43.709
ENSHBUG00000006238	-	92	45.783	ENSHBUG00000017864	-	86	45.783
ENSHBUG00000006238	-	94	41.615	ENSHBUG00000011969	gfi1ab	56	41.615
ENSHBUG00000006238	-	92	43.636	ENSHBUG00000003165	-	62	43.636
ENSHBUG00000006238	-	94	42.373	ENSHBUG00000002878	-	55	42.373
ENSHBUG00000006238	-	94	48.092	ENSHBUG00000015719	-	98	48.092
ENSHBUG00000006238	-	94	50.000	ENSHBUG00000009274	-	95	50.000
ENSHBUG00000006238	-	93	38.843	ENSHBUG00000013467	-	50	38.843
ENSHBUG00000006238	-	94	47.059	ENSHBUG00000022073	-	58	47.059
ENSHBUG00000006238	-	93	50.192	ENSHBUG00000006250	-	87	50.192
ENSHBUG00000006238	-	96	34.632	ENSHBUG00000015404	-	68	34.632
ENSHBUG00000006238	-	94	36.713	ENSHBUG00000023375	prdm5	75	37.743
ENSHBUG00000006238	-	92	54.286	ENSHBUG00000020544	-	96	54.286
ENSHBUG00000006238	-	95	45.082	ENSHBUG00000015942	-	95	45.082
ENSHBUG00000006238	-	93	46.629	ENSHBUG00000021003	-	96	46.629
ENSHBUG00000006238	-	95	41.341	ENSHBUG00000011944	-	54	41.341
ENSHBUG00000006238	-	94	42.623	ENSHBUG00000018916	-	64	41.176
ENSHBUG00000006238	-	94	38.750	ENSHBUG00000016334	-	50	38.750
ENSHBUG00000006238	-	93	40.000	ENSHBUG00000002541	-	75	40.000
ENSHBUG00000006238	-	93	44.086	ENSHBUG00000011194	-	76	44.086
ENSHBUG00000006238	-	94	43.295	ENSHBUG00000015166	-	82	43.295
ENSHBUG00000006238	-	92	40.161	ENSHBUG00000011725	-	64	40.161
ENSHBUG00000006238	-	93	45.238	ENSHBUG00000013194	-	95	45.238
ENSHBUG00000006238	-	94	62.963	ENSHBUG00000005848	-	91	62.963
ENSHBUG00000006238	-	92	42.581	ENSHBUG00000017924	-	51	42.581
ENSHBUG00000006238	-	92	44.444	ENSHBUG00000007188	-	78	44.444
ENSHBUG00000006238	-	93	43.312	ENSHBUG00000000099	-	80	43.312
ENSHBUG00000006238	-	92	47.115	ENSHBUG00000012215	-	96	45.038
ENSHBUG00000006238	-	92	45.455	ENSHBUG00000007068	-	57	45.455
ENSHBUG00000006238	-	91	40.146	ENSHBUG00000023209	-	94	40.146
ENSHBUG00000006238	-	95	44.162	ENSHBUG00000015803	-	88	42.972
ENSHBUG00000006238	-	92	39.245	ENSHBUG00000012007	-	69	39.245
ENSHBUG00000006238	-	92	52.459	ENSHBUG00000020527	-	95	52.459
ENSHBUG00000006238	-	98	40.840	ENSHBUG00000017372	-	94	40.840
ENSHBUG00000006238	-	92	39.344	ENSHBUG00000007764	snai2	54	39.344
ENSHBUG00000006238	-	95	38.235	ENSHBUG00000002320	-	61	38.462
ENSHBUG00000006238	-	99	39.103	ENSHBUG00000012432	-	77	39.103
ENSHBUG00000006238	-	94	42.391	ENSHBUG00000009953	-	63	42.391
ENSHBUG00000006238	-	93	36.937	ENSHBUG00000019090	ZNF319	87	36.937
ENSHBUG00000006238	-	95	47.191	ENSHBUG00000021028	-	81	42.308
ENSHBUG00000006238	-	89	48.936	ENSHBUG00000021970	-	73	48.936
ENSHBUG00000006238	-	92	45.106	ENSHBUG00000019377	-	61	45.106
ENSHBUG00000006238	-	94	41.860	ENSHBUG00000007316	-	68	41.860
ENSHBUG00000006238	-	94	36.296	ENSHBUG00000000731	-	52	36.296
ENSHBUG00000006238	-	93	37.267	ENSHBUG00000006656	-	59	37.267
ENSHBUG00000006238	-	92	46.000	ENSHBUG00000002526	-	64	41.538
ENSHBUG00000006238	-	93	50.000	ENSHBUG00000022063	-	59	50.000
ENSHBUG00000006238	-	98	39.157	ENSHBUG00000013518	-	92	39.157
ENSHBUG00000006238	-	93	41.593	ENSHBUG00000006984	-	95	41.593
ENSHBUG00000006238	-	92	49.721	ENSHBUG00000000820	-	98	49.721
ENSHBUG00000006238	-	94	37.589	ENSHBUG00000016621	scrt1b	55	37.589
ENSHBUG00000006238	-	92	42.609	ENSHBUG00000000146	-	78	42.609
ENSHBUG00000006238	-	93	46.774	ENSHBUG00000004718	-	92	46.774
ENSHBUG00000006238	-	95	40.580	ENSHBUG00000004840	znf646	76	34.074
ENSHBUG00000006238	-	81	44.681	ENSHBUG00000021906	-	63	44.681
ENSHBUG00000006238	-	94	32.456	ENSHBUG00000017542	znf526	54	32.456
ENSHBUG00000006238	-	92	56.780	ENSHBUG00000017251	-	100	56.780
ENSHBUG00000006238	-	94	53.952	ENSHBUG00000002961	-	99	53.952
ENSHBUG00000006238	-	94	33.333	ENSHBUG00000009720	-	62	33.333
ENSHBUG00000006238	-	93	46.452	ENSHBUG00000013542	-	58	46.452
ENSHBUG00000006238	-	94	38.983	ENSHBUG00000012492	scrt2	61	38.983
ENSHBUG00000006238	-	92	46.575	ENSHBUG00000003529	-	83	46.575
ENSHBUG00000006238	-	95	34.783	ENSHBUG00000018577	PRDM15	52	35.065
ENSHBUG00000006238	-	92	40.196	ENSHBUG00000008502	-	82	40.196
ENSHBUG00000006238	-	98	40.260	ENSHBUG00000009837	znf236	70	41.053
ENSHBUG00000006238	-	93	43.017	ENSHBUG00000019800	-	92	43.017
ENSHBUG00000006238	-	94	50.479	ENSHBUG00000003449	-	91	50.479
ENSHBUG00000006238	-	95	42.735	ENSHBUG00000012758	-	87	43.590
ENSHBUG00000006238	-	93	41.339	ENSHBUG00000012230	-	66	41.339
ENSHBUG00000006238	-	93	52.444	ENSHBUG00000013296	-	96	52.444
ENSHBUG00000006238	-	93	42.208	ENSHBUG00000013292	-	62	41.667
ENSHBUG00000006238	-	94	37.815	ENSHBUG00000002841	-	82	37.815
ENSHBUG00000006238	-	93	35.055	ENSHBUG00000018885	-	52	36.752
ENSHBUG00000006238	-	94	41.525	ENSHBUG00000019101	-	52	41.525
ENSHBUG00000006238	-	92	48.352	ENSHBUG00000012565	-	90	48.352
ENSHBUG00000006238	-	95	43.878	ENSHBUG00000013065	-	51	43.878
ENSHBUG00000006238	-	99	44.805	ENSHBUG00000009941	-	63	44.805
ENSHBUG00000006238	-	98	45.055	ENSHBUG00000020071	-	50	45.055
ENSHBUG00000006238	-	94	41.615	ENSHBUG00000007389	gfi1aa	51	41.615
ENSHBUG00000006238	-	94	36.364	ENSHBUG00000016927	-	63	38.202
ENSHBUG00000006238	-	93	42.135	ENSHBUG00000002889	-	52	42.135
ENSHBUG00000006238	-	93	42.953	ENSHBUG00000002307	-	71	39.286
ENSHBUG00000006238	-	94	41.667	ENSHBUG00000005451	gfi1b	52	41.667
ENSHBUG00000006238	-	93	47.024	ENSHBUG00000001075	-	92	44.878
ENSHBUG00000006238	-	92	43.011	ENSHBUG00000012984	-	74	43.011
ENSHBUG00000006238	-	97	50.787	ENSHBUG00000005809	-	98	50.763
ENSHBUG00000006238	-	93	41.463	ENSHBUG00000002530	-	55	41.463
ENSHBUG00000006238	-	94	38.462	ENSHBUG00000002533	-	52	38.462
ENSHBUG00000006238	-	99	42.125	ENSHBUG00000003057	-	93	45.525
ENSHBUG00000006238	-	95	42.400	ENSHBUG00000015393	-	75	42.400
ENSHBUG00000006238	-	93	36.607	ENSHBUG00000014494	-	60	36.607
ENSHBUG00000006238	-	94	50.893	ENSHBUG00000014725	-	87	50.893
ENSHBUG00000006238	-	99	37.008	ENSHBUG00000016384	-	89	37.008
ENSHBUG00000006238	-	94	48.413	ENSHBUG00000013264	-	91	56.098
ENSHBUG00000006238	-	93	35.780	ENSHBUG00000004217	-	62	35.268
ENSHBUG00000006238	-	92	51.230	ENSHBUG00000006863	-	93	51.230

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000006238	-	94	46.753	ENSACIG00000019791	-	92	46.087	Amphilophus_citrinellus
ENSHBUG00000006238	-	92	48.507	ENSACIG00000011153	-	69	43.878	Amphilophus_citrinellus
ENSHBUG00000006238	-	93	60.606	ENSACLG00000022499	-	85	60.606	Astatotilapia_calliptera
ENSHBUG00000006238	-	94	50.763	ENSACLG00000017329	-	86	50.763	Astatotilapia_calliptera
ENSHBUG00000006238	-	93	44.000	ENSACLG00000020474	-	83	44.000	Astatotilapia_calliptera
ENSHBUG00000006238	-	92	59.091	ENSACLG00000001507	-	75	59.091	Astatotilapia_calliptera
ENSHBUG00000006238	-	92	50.990	ENSACLG00000014167	-	57	50.990	Astatotilapia_calliptera
ENSHBUG00000006238	-	93	46.009	ENSAMXG00000010078	-	81	46.009	Astyanax_mexicanus
ENSHBUG00000006238	-	93	48.133	ENSAMXG00000031501	-	88	48.133	Astyanax_mexicanus
ENSHBUG00000006238	-	93	47.436	ENSAMXG00000036849	-	81	47.436	Astyanax_mexicanus
ENSHBUG00000006238	-	93	50.633	ENSAMXG00000038324	-	71	50.633	Astyanax_mexicanus
ENSHBUG00000006238	-	92	45.304	ENSAMXG00000039162	-	95	45.304	Astyanax_mexicanus
ENSHBUG00000006238	-	94	49.528	ENSAMXG00000031646	-	94	49.528	Astyanax_mexicanus
ENSHBUG00000006238	-	94	45.082	ENSAMXG00000031844	-	90	45.082	Astyanax_mexicanus
ENSHBUG00000006238	-	93	45.789	ENSAMXG00000039770	-	84	45.789	Astyanax_mexicanus
ENSHBUG00000006238	-	94	42.041	ENSCHIG00000015741	-	87	42.041	Capra_hircus
ENSHBUG00000006238	-	94	41.786	ENSCCAG00000035188	-	84	41.786	Cebus_capucinus
ENSHBUG00000006238	-	92	38.994	ENSCPBG00000001258	-	96	38.994	Chrysemys_picta_bellii
ENSHBUG00000006238	-	96	44.076	ENSDNOG00000048084	-	98	44.076	Dasypus_novemcinctus
ENSHBUG00000006238	-	94	41.603	ENSETEG00000002865	-	81	41.603	Echinops_telfairi
ENSHBUG00000006238	-	94	45.161	ENSEBUG00000012748	-	68	45.161	Eptatretus_burgeri
ENSHBUG00000006238	-	97	41.406	ENSEBUG00000011479	-	71	41.406	Eptatretus_burgeri
ENSHBUG00000006238	-	97	43.415	ENSEBUG00000008157	-	100	43.415	Eptatretus_burgeri
ENSHBUG00000006238	-	94	36.508	ENSEBUG00000011582	-	73	36.508	Eptatretus_burgeri
ENSHBUG00000006238	-	94	39.655	ENSECAG00000035557	-	77	39.655	Equus_caballus
ENSHBUG00000006238	-	94	36.546	ENSFHEG00000016184	-	73	36.546	Fundulus_heteroclitus
ENSHBUG00000006238	-	95	37.624	ENSGMOG00000004315	-	95	37.624	Gadus_morhua
ENSHBUG00000006238	-	99	34.513	ENSGACG00000019863	-	98	34.701	Gasterosteus_aculeatus
ENSHBUG00000006238	-	94	42.917	ENSGAGG00000007230	-	96	42.917	Gopherus_agassizii
ENSHBUG00000006238	-	94	43.046	ENSGAGG00000013851	-	69	43.046	Gopherus_agassizii
ENSHBUG00000006238	-	94	45.865	ENSHGLG00000018394	-	94	45.865	Heterocephalus_glaber_female
ENSHBUG00000006238	-	98	47.895	ENSIPUG00000006936	-	92	47.895	Ictalurus_punctatus
ENSHBUG00000006238	-	97	45.217	ENSIPUG00000003960	-	83	45.217	Ictalurus_punctatus
ENSHBUG00000006238	-	96	47.619	ENSIPUG00000021472	-	78	47.619	Ictalurus_punctatus
ENSHBUG00000006238	-	92	44.545	ENSIPUG00000013065	-	98	44.545	Ictalurus_punctatus
ENSHBUG00000006238	-	94	47.486	ENSIPUG00000021518	-	88	47.486	Ictalurus_punctatus
ENSHBUG00000006238	-	95	44.656	ENSIPUG00000021434	-	96	44.656	Ictalurus_punctatus
ENSHBUG00000006238	-	98	50.649	ENSIPUG00000015233	-	62	50.649	Ictalurus_punctatus
ENSHBUG00000006238	-	93	49.275	ENSIPUG00000022751	-	99	45.320	Ictalurus_punctatus
ENSHBUG00000006238	-	92	46.939	ENSIPUG00000021484	-	98	46.939	Ictalurus_punctatus
ENSHBUG00000006238	-	96	42.802	ENSIPUG00000001941	-	93	42.802	Ictalurus_punctatus
ENSHBUG00000006238	-	94	43.478	ENSIPUG00000021527	-	97	43.478	Ictalurus_punctatus
ENSHBUG00000006238	-	88	42.920	ENSIPUG00000011073	-	97	45.652	Ictalurus_punctatus
ENSHBUG00000006238	-	95	47.436	ENSIPUG00000009750	-	94	47.232	Ictalurus_punctatus
ENSHBUG00000006238	-	94	44.550	ENSSTOG00000034297	-	64	44.654	Ictidomys_tridecemlineatus
ENSHBUG00000006238	-	94	44.318	ENSMFAG00000046052	-	85	44.318	Macaca_fascicularis
ENSHBUG00000006238	-	94	44.318	ENSMNEG00000041636	-	85	44.318	Macaca_nemestrina
ENSHBUG00000006238	-	94	44.318	ENSMLEG00000032640	-	85	44.318	Mandrillus_leucophaeus
ENSHBUG00000006238	-	98	38.655	ENSMAMG00000009051	-	84	37.220	Mastacembelus_armatus
ENSHBUG00000006238	-	93	54.574	ENSMZEG00005019982	-	95	54.167	Maylandia_zebra
ENSHBUG00000006238	-	93	63.014	ENSMZEG00005020736	-	92	63.014	Maylandia_zebra
ENSHBUG00000006238	-	92	51.477	ENSMZEG00005027950	-	90	51.477	Maylandia_zebra
ENSHBUG00000006238	-	92	61.871	ENSMZEG00005021421	-	99	61.871	Maylandia_zebra
ENSHBUG00000006238	-	93	57.595	ENSMZEG00005012737	-	82	57.595	Maylandia_zebra
ENSHBUG00000006238	-	93	54.114	ENSMZEG00005027285	-	83	54.483	Maylandia_zebra
ENSHBUG00000006238	-	93	46.535	ENSMALG00000004413	-	97	46.411	Monopterus_albus
ENSHBUG00000006238	-	97	47.881	ENSNBRG00000016582	-	83	44.783	Neolamprologus_brichardi
ENSHBUG00000006238	-	95	42.208	ENSNBRG00000015652	-	81	42.208	Neolamprologus_brichardi
ENSHBUG00000006238	-	93	47.638	ENSNBRG00000016603	-	93	47.638	Neolamprologus_brichardi
ENSHBUG00000006238	-	98	42.654	ENSNBRG00000015873	-	96	43.781	Neolamprologus_brichardi
ENSHBUG00000006238	-	92	43.636	ENSNBRG00000013604	-	69	43.636	Neolamprologus_brichardi
ENSHBUG00000006238	-	93	47.076	ENSONIG00000007931	-	89	48.726	Oreochromis_niloticus
ENSHBUG00000006238	-	95	50.806	ENSONIG00000000122	-	99	50.806	Oreochromis_niloticus
ENSHBUG00000006238	-	93	60.440	ENSONIG00000015166	-	100	60.440	Oreochromis_niloticus
ENSHBUG00000006238	-	93	50.318	ENSONIG00000008953	-	98	50.318	Oreochromis_niloticus
ENSHBUG00000006238	-	93	45.723	ENSONIG00000000093	-	99	49.355	Oreochromis_niloticus
ENSHBUG00000006238	-	92	47.479	ENSONIG00000001834	-	99	47.479	Oreochromis_niloticus
ENSHBUG00000006238	-	95	41.451	ENSONIG00000020516	-	96	41.117	Oreochromis_niloticus
ENSHBUG00000006238	-	92	50.806	ENSONIG00000021124	-	99	50.806	Oreochromis_niloticus
ENSHBUG00000006238	-	94	41.975	ENSORLG00015012951	-	83	42.105	Oryzias_latipes_hsok
ENSHBUG00000006238	-	97	44.867	ENSOGAG00000025289	-	84	46.768	Otolemur_garnettii
ENSHBUG00000006238	-	94	44.318	ENSPANG00000030978	-	89	44.318	Papio_anubis
ENSHBUG00000006238	-	94	42.857	ENSPEMG00000016975	Zfp940	71	42.857	Peromyscus_maniculatus_bairdii
ENSHBUG00000006238	-	96	42.405	ENSPMEG00000004595	-	91	38.735	Poecilia_mexicana
ENSHBUG00000006238	-	92	46.914	ENSPPYG00000009906	-	77	46.914	Pongo_abelii
ENSHBUG00000006238	-	93	47.085	ENSPNYG00000024244	-	90	45.968	Pundamilia_nyererei
ENSHBUG00000006238	-	93	44.175	ENSPNAG00000011625	-	81	44.444	Pygocentrus_nattereri
ENSHBUG00000006238	-	96	45.420	ENSPNAG00000019338	-	98	45.420	Pygocentrus_nattereri
ENSHBUG00000006238	-	94	44.318	ENSSBOG00000029728	-	85	44.318	Saimiri_boliviensis_boliviensis
ENSHBUG00000006238	-	94	45.247	ENSSPUG00000010059	-	87	45.247	Sphenodon_punctatus