EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000006245 (Gene tree)
Gene ID: 102313853
Gene Symbol: lig4
Alias: zgc:165595
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 8536 bases
Position: chrJH425920.1:159292-167827
Accession: 102313853
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000004912	RNA_ligase	PF09414.10	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000007892	-	6304	XM_005948209	ENSHBUP00000004912	910 (aa)	XP_005948271	UPI0003BDAF1A

Gene Model

Click here to download ENSHBUG00000006245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000006245's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000006245	lig4	99	65.787	ENSG00000174405	LIG4	99	66.311	Homo_sapiens
ENSHBUG00000006245	lig4	100	89.890	ENSAPOG00000000866	lig4	100	89.890	Acanthochromis_polyacanthus
ENSHBUG00000006245	lig4	99	64.153	ENSAMEG00000019685	LIG4	99	64.153	Ailuropoda_melanoleuca
ENSHBUG00000006245	lig4	100	93.077	ENSACIG00000018309	lig4	100	93.077	Amphilophus_citrinellus
ENSHBUG00000006245	lig4	99	90.099	ENSAOCG00000011768	lig4	100	90.000	Amphiprion_ocellaris
ENSHBUG00000006245	lig4	100	90.000	ENSAPEG00000017815	lig4	100	90.000	Amphiprion_percula
ENSHBUG00000006245	lig4	99	87.885	ENSATEG00000005583	lig4	99	87.885	Anabas_testudineus
ENSHBUG00000006245	lig4	96	67.086	ENSAPLG00000001673	LIG4	99	67.086	Anas_platyrhynchos
ENSHBUG00000006245	lig4	99	67.550	ENSACAG00000014566	LIG4	99	67.550	Anolis_carolinensis
ENSHBUG00000006245	lig4	99	65.347	ENSANAG00000012446	LIG4	99	65.347	Aotus_nancymaae
ENSHBUG00000006245	lig4	100	99.780	ENSACLG00000027051	lig4	100	99.780	Astatotilapia_calliptera
ENSHBUG00000006245	lig4	99	80.549	ENSAMXG00000008192	lig4	94	80.549	Astyanax_mexicanus
ENSHBUG00000006245	lig4	99	65.165	ENSBTAG00000015868	LIG4	99	65.165	Bos_taurus
ENSHBUG00000006245	lig4	99	64.906	ENSCJAG00000014689	LIG4	99	64.906	Callithrix_jacchus
ENSHBUG00000006245	lig4	99	64.835	ENSCAFG00000006031	LIG4	99	64.835	Canis_familiaris
ENSHBUG00000006245	lig4	99	64.835	ENSCAFG00020021230	LIG4	99	64.835	Canis_lupus_dingo
ENSHBUG00000006245	lig4	99	65.055	ENSCHIG00000001019	LIG4	99	65.055	Capra_hircus
ENSHBUG00000006245	lig4	98	64.967	ENSCAPG00000006284	LIG4	99	64.967	Cavia_aperea
ENSHBUG00000006245	lig4	99	64.796	ENSCPOG00000014266	LIG4	99	64.796	Cavia_porcellus
ENSHBUG00000006245	lig4	99	65.567	ENSCCAG00000019971	LIG4	99	65.567	Cebus_capucinus
ENSHBUG00000006245	lig4	98	65.410	ENSCATG00000021075	LIG4	99	65.410	Cercocebus_atys
ENSHBUG00000006245	lig4	98	65.632	ENSCLAG00000003376	LIG4	99	65.304	Chinchilla_lanigera
ENSHBUG00000006245	lig4	98	65.410	ENSCSAG00000000211	LIG4	99	65.410	Chlorocebus_sabaeus
ENSHBUG00000006245	lig4	98	68.444	ENSCPBG00000023291	LIG4	99	67.908	Chrysemys_picta_bellii
ENSHBUG00000006245	lig4	69	47.642	ENSCING00000009536	-	97	47.642	Ciona_intestinalis
ENSHBUG00000006245	lig4	83	45.132	ENSCSAVG00000010336	-	98	45.132	Ciona_savignyi
ENSHBUG00000006245	lig4	98	65.299	ENSCANG00000005805	LIG4	99	65.299	Colobus_angolensis_palliatus
ENSHBUG00000006245	lig4	99	64.945	ENSCGRG00001012072	Lig4	99	64.622	Cricetulus_griseus_chok1gshd
ENSHBUG00000006245	lig4	99	64.945	ENSCGRG00000013417	Lig4	99	64.622	Cricetulus_griseus_crigri
ENSHBUG00000006245	lig4	97	84.667	ENSCSEG00000013905	lig4	96	84.667	Cynoglossus_semilaevis
ENSHBUG00000006245	lig4	100	87.157	ENSCVAG00000007896	lig4	100	87.157	Cyprinodon_variegatus
ENSHBUG00000006245	lig4	99	80.088	ENSDARG00000060620	lig4	99	80.088	Danio_rerio
ENSHBUG00000006245	lig4	99	65.275	ENSDNOG00000000513	LIG4	99	65.275	Dasypus_novemcinctus
ENSHBUG00000006245	lig4	98	65.521	ENSDORG00000027303	Lig4	99	65.521	Dipodomys_ordii
ENSHBUG00000006245	lig4	93	30.821	FBgn0030506	Lig4	93	30.709	Drosophila_melanogaster
ENSHBUG00000006245	lig4	98	63.152	ENSETEG00000015563	LIG4	99	63.374	Echinops_telfairi
ENSHBUG00000006245	lig4	99	44.561	ENSEBUG00000014243	lig4	99	44.142	Eptatretus_burgeri
ENSHBUG00000006245	lig4	99	64.835	ENSEASG00005022073	LIG4	99	64.835	Equus_asinus_asinus
ENSHBUG00000006245	lig4	99	65.055	ENSECAG00000003257	LIG4	99	64.945	Equus_caballus
ENSHBUG00000006245	lig4	98	83.092	ENSELUG00000006787	lig4	99	83.204	Esox_lucius
ENSHBUG00000006245	lig4	99	64.286	ENSFCAG00000031985	LIG4	99	64.286	Felis_catus
ENSHBUG00000006245	lig4	89	68.812	ENSFALG00000004214	LIG4	98	68.812	Ficedula_albicollis
ENSHBUG00000006245	lig4	99	64.026	ENSFDAG00000008973	LIG4	99	64.026	Fukomys_damarensis
ENSHBUG00000006245	lig4	100	87.925	ENSFHEG00000007398	lig4	90	88.022	Fundulus_heteroclitus
ENSHBUG00000006245	lig4	85	77.249	ENSGMOG00000012843	lig4	99	77.249	Gadus_morhua
ENSHBUG00000006245	lig4	99	65.862	ENSGALG00000016854	LIG4	99	65.862	Gallus_gallus
ENSHBUG00000006245	lig4	99	86.637	ENSGAFG00000019779	lig4	96	86.966	Gambusia_affinis
ENSHBUG00000006245	lig4	99	84.088	ENSGACG00000014135	lig4	99	84.088	Gasterosteus_aculeatus
ENSHBUG00000006245	lig4	99	65.567	ENSGGOG00000027771	LIG4	99	65.567	Gorilla_gorilla
ENSHBUG00000006245	lig4	99	64.427	ENSHGLG00000000718	LIG4	99	64.427	Heterocephalus_glaber_female
ENSHBUG00000006245	lig4	99	64.427	ENSHGLG00100003265	LIG4	99	64.427	Heterocephalus_glaber_male
ENSHBUG00000006245	lig4	99	81.229	ENSHCOG00000012010	lig4	99	81.229	Hippocampus_comes
ENSHBUG00000006245	lig4	100	78.022	ENSIPUG00000013748	lig4	100	78.022	Ictalurus_punctatus
ENSHBUG00000006245	lig4	99	65.017	ENSSTOG00000024303	LIG4	99	64.693	Ictidomys_tridecemlineatus
ENSHBUG00000006245	lig4	99	64.984	ENSJJAG00000006750	Lig4	99	64.551	Jaculus_jaculus
ENSHBUG00000006245	lig4	99	84.488	ENSKMAG00000001149	lig4	99	84.488	Kryptolebias_marmoratus
ENSHBUG00000006245	lig4	91	88.000	ENSLBEG00000014578	lig4	99	88.000	Labrus_bergylta
ENSHBUG00000006245	lig4	99	68.167	ENSLACG00000003282	LIG4	99	68.167	Latimeria_chalumnae
ENSHBUG00000006245	lig4	99	72.368	ENSLOCG00000008901	lig4	99	72.368	Lepisosteus_oculatus
ENSHBUG00000006245	lig4	99	64.105	ENSLAFG00000031152	LIG4	99	64.105	Loxodonta_africana
ENSHBUG00000006245	lig4	98	65.410	ENSMFAG00000037235	LIG4	99	65.410	Macaca_fascicularis
ENSHBUG00000006245	lig4	98	65.299	ENSMMUG00000008874	LIG4	99	65.299	Macaca_mulatta
ENSHBUG00000006245	lig4	98	65.410	ENSMNEG00000023575	LIG4	99	65.410	Macaca_nemestrina
ENSHBUG00000006245	lig4	98	65.299	ENSMLEG00000026720	LIG4	99	65.299	Mandrillus_leucophaeus
ENSHBUG00000006245	lig4	100	88.022	ENSMAMG00000008472	lig4	99	88.022	Mastacembelus_armatus
ENSHBUG00000006245	lig4	100	99.560	ENSMZEG00005001855	lig4	100	99.560	Maylandia_zebra
ENSHBUG00000006245	lig4	99	65.862	ENSMGAG00000015532	LIG4	99	65.862	Meleagris_gallopavo
ENSHBUG00000006245	lig4	99	63.696	ENSMOCG00000019000	Lig4	99	63.586	Microtus_ochrogaster
ENSHBUG00000006245	lig4	100	86.703	ENSMMOG00000004390	lig4	100	86.703	Mola_mola
ENSHBUG00000006245	lig4	99	66.703	ENSMODG00000025064	LIG4	99	66.703	Monodelphis_domestica
ENSHBUG00000006245	lig4	100	87.033	ENSMALG00000008555	lig4	100	87.033	Monopterus_albus
ENSHBUG00000006245	lig4	99	65.017	MGP_CAROLIEiJ_G0030809	Lig4	99	64.803	Mus_caroli
ENSHBUG00000006245	lig4	99	64.686	ENSMUSG00000049717	Lig4	99	64.364	Mus_musculus
ENSHBUG00000006245	lig4	99	64.466	MGP_PahariEiJ_G0021270	Lig4	99	64.466	Mus_pahari
ENSHBUG00000006245	lig4	99	64.796	MGP_SPRETEiJ_G0031917	Lig4	99	64.583	Mus_spretus
ENSHBUG00000006245	lig4	99	64.835	ENSMPUG00000018675	LIG4	99	64.835	Mustela_putorius_furo
ENSHBUG00000006245	lig4	99	65.055	ENSMLUG00000001267	LIG4	99	65.055	Myotis_lucifugus
ENSHBUG00000006245	lig4	99	65.127	ENSNGAG00000013258	Lig4	99	65.017	Nannospalax_galili
ENSHBUG00000006245	lig4	100	98.791	ENSNBRG00000021252	lig4	100	98.791	Neolamprologus_brichardi
ENSHBUG00000006245	lig4	99	65.237	ENSNLEG00000007888	LIG4	99	65.237	Nomascus_leucogenys
ENSHBUG00000006245	lig4	98	64.523	ENSOPRG00000005765	LIG4	99	64.412	Ochotona_princeps
ENSHBUG00000006245	lig4	98	64.412	ENSODEG00000019683	LIG4	99	64.412	Octodon_degus
ENSHBUG00000006245	lig4	100	97.363	ENSONIG00000011969	lig4	99	97.363	Oreochromis_niloticus
ENSHBUG00000006245	lig4	99	64.796	ENSOCUG00000015734	LIG4	99	64.686	Oryctolagus_cuniculus
ENSHBUG00000006245	lig4	99	85.291	ENSORLG00000004041	lig4	99	85.291	Oryzias_latipes
ENSHBUG00000006245	lig4	99	85.181	ENSORLG00020019607	lig4	99	85.181	Oryzias_latipes_hni
ENSHBUG00000006245	lig4	99	85.291	ENSORLG00015017754	lig4	99	85.291	Oryzias_latipes_hsok
ENSHBUG00000006245	lig4	75	89.229	ENSOMEG00000003459	lig4	99	89.229	Oryzias_melastigma
ENSHBUG00000006245	lig4	99	65.714	ENSOGAG00000032120	LIG4	99	65.714	Otolemur_garnettii
ENSHBUG00000006245	lig4	81	69.220	ENSOARG00000005590	LIG4	98	69.220	Ovis_aries
ENSHBUG00000006245	lig4	99	65.567	ENSPPAG00000032998	LIG4	99	65.567	Pan_paniscus
ENSHBUG00000006245	lig4	99	64.725	ENSPPRG00000017804	LIG4	99	64.725	Panthera_pardus
ENSHBUG00000006245	lig4	99	64.615	ENSPTIG00000010051	LIG4	99	64.615	Panthera_tigris_altaica
ENSHBUG00000006245	lig4	99	65.677	ENSPTRG00000006025	LIG4	99	65.677	Pan_troglodytes
ENSHBUG00000006245	lig4	98	65.521	ENSPANG00000007562	LIG4	99	65.521	Papio_anubis
ENSHBUG00000006245	lig4	100	77.717	ENSPKIG00000011645	lig4	99	77.717	Paramormyrops_kingsleyae
ENSHBUG00000006245	lig4	99	67.838	ENSPSIG00000001504	LIG4	99	67.838	Pelodiscus_sinensis
ENSHBUG00000006245	lig4	98	80.963	ENSPMGG00000013486	lig4	99	80.198	Periophthalmus_magnuspinnatus
ENSHBUG00000006245	lig4	99	64.286	ENSPEMG00000000076	Lig4	99	64.286	Peromyscus_maniculatus_bairdii
ENSHBUG00000006245	lig4	99	65.604	ENSPCIG00000021882	LIG4	99	65.604	Phascolarctos_cinereus
ENSHBUG00000006245	lig4	100	87.281	ENSPFOG00000000797	lig4	99	87.706	Poecilia_formosa
ENSHBUG00000006245	lig4	100	87.171	ENSPLAG00000001196	lig4	99	87.596	Poecilia_latipinna
ENSHBUG00000006245	lig4	100	87.281	ENSPMEG00000021353	lig4	99	87.706	Poecilia_mexicana
ENSHBUG00000006245	lig4	100	86.842	ENSPREG00000007323	lig4	100	87.171	Poecilia_reticulata
ENSHBUG00000006245	lig4	99	65.017	ENSPPYG00000005540	LIG4	99	65.017	Pongo_abelii
ENSHBUG00000006245	lig4	99	64.452	ENSPVAG00000016403	LIG4	99	64.128	Pteropus_vampyrus
ENSHBUG00000006245	lig4	100	99.451	ENSPNYG00000009660	lig4	100	99.451	Pundamilia_nyererei
ENSHBUG00000006245	lig4	99	80.816	ENSPNAG00000028056	lig4	99	80.816	Pygocentrus_nattereri
ENSHBUG00000006245	lig4	99	80.816	ENSPNAG00000028069	LIG4	99	80.816	Pygocentrus_nattereri
ENSHBUG00000006245	lig4	99	64.356	ENSRNOG00000014605	Lig4	99	64.356	Rattus_norvegicus
ENSHBUG00000006245	lig4	98	64.634	ENSRBIG00000039962	LIG4	99	64.634	Rhinopithecus_bieti
ENSHBUG00000006245	lig4	98	65.299	ENSRROG00000006040	LIG4	99	65.299	Rhinopithecus_roxellana
ENSHBUG00000006245	lig4	99	65.017	ENSSBOG00000019029	LIG4	99	65.017	Saimiri_boliviensis_boliviensis
ENSHBUG00000006245	lig4	99	63.626	ENSSHAG00000009525	LIG4	99	63.417	Sarcophilus_harrisii
ENSHBUG00000006245	lig4	100	78.791	ENSSFOG00015012835	lig4	100	78.791	Scleropages_formosus
ENSHBUG00000006245	lig4	100	83.187	ENSSMAG00000011267	lig4	100	83.187	Scophthalmus_maximus
ENSHBUG00000006245	lig4	100	87.309	ENSSDUG00000010343	lig4	99	87.623	Seriola_dumerili
ENSHBUG00000006245	lig4	100	86.324	ENSSLDG00000003239	lig4	99	86.418	Seriola_lalandi_dorsalis
ENSHBUG00000006245	lig4	98	63.315	ENSSARG00000006573	LIG4	99	63.315	Sorex_araneus
ENSHBUG00000006245	lig4	92	69.011	ENSSPUG00000002444	LIG4	99	69.011	Sphenodon_punctatus
ENSHBUG00000006245	lig4	99	89.989	ENSSPAG00000001609	lig4	99	89.989	Stegastes_partitus
ENSHBUG00000006245	lig4	99	64.939	ENSSSCG00000009540	LIG4	99	64.939	Sus_scrofa
ENSHBUG00000006245	lig4	99	66.518	ENSTGUG00000010795	LIG4	99	66.518	Taeniopygia_guttata
ENSHBUG00000006245	lig4	99	84.268	ENSTRUG00000009984	lig4	99	84.268	Takifugu_rubripes
ENSHBUG00000006245	lig4	99	82.178	ENSTNIG00000010348	lig4	99	82.398	Tetraodon_nigroviridis
ENSHBUG00000006245	lig4	99	65.457	ENSTBEG00000017741	LIG4	99	65.457	Tupaia_belangeri
ENSHBUG00000006245	lig4	99	64.796	ENSTTRG00000012660	LIG4	99	64.796	Tursiops_truncatus
ENSHBUG00000006245	lig4	99	64.230	ENSUAMG00000003773	LIG4	99	64.230	Ursus_americanus
ENSHBUG00000006245	lig4	99	66.959	ENSXETG00000002654	lig4	99	66.959	Xenopus_tropicalis
ENSHBUG00000006245	lig4	100	86.842	ENSXCOG00000017401	lig4	100	87.171	Xiphophorus_couchianus
ENSHBUG00000006245	lig4	100	87.061	ENSXMAG00000015142	lig4	99	87.486	Xiphophorus_maculatus