EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000006250 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 60452 bases
Position: chrJH425819.1:4714-65165
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000024695	zf-C2H2	PF00096.26	6.1e-64	1	12
ENSHBUP00000024695	zf-C2H2	PF00096.26	6.1e-64	2	12
ENSHBUP00000024695	zf-C2H2	PF00096.26	6.1e-64	3	12
ENSHBUP00000024695	zf-C2H2	PF00096.26	6.1e-64	4	12
ENSHBUP00000024695	zf-C2H2	PF00096.26	6.1e-64	5	12
ENSHBUP00000024695	zf-C2H2	PF00096.26	6.1e-64	6	12
ENSHBUP00000024695	zf-C2H2	PF00096.26	6.1e-64	7	12
ENSHBUP00000024695	zf-C2H2	PF00096.26	6.1e-64	8	12
ENSHBUP00000024695	zf-C2H2	PF00096.26	6.1e-64	9	12
ENSHBUP00000024695	zf-C2H2	PF00096.26	6.1e-64	10	12
ENSHBUP00000024695	zf-C2H2	PF00096.26	6.1e-64	11	12
ENSHBUP00000024695	zf-C2H2	PF00096.26	6.1e-64	12	12
ENSHBUP00000024695	zf-met	PF12874.7	7.1e-20	1	3
ENSHBUP00000024695	zf-met	PF12874.7	7.1e-20	2	3
ENSHBUP00000024695	zf-met	PF12874.7	7.1e-20	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000007894	-	1605	-	ENSHBUP00000024695	534 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000006250's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000006250's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000006250	-	93	43.446	ENSHBUG00000001075	-	98	43.229
ENSHBUG00000006250	-	78	46.108	ENSHBUG00000017924	-	53	46.108
ENSHBUG00000006250	-	84	38.462	ENSHBUG00000000636	-	53	42.169
ENSHBUG00000006250	-	88	42.262	ENSHBUG00000005451	gfi1b	68	42.262
ENSHBUG00000006250	-	93	41.549	ENSHBUG00000015226	-	51	41.549
ENSHBUG00000006250	-	93	49.419	ENSHBUG00000013296	-	98	49.128
ENSHBUG00000006250	-	92	40.532	ENSHBUG00000013292	-	75	40.532
ENSHBUG00000006250	-	92	38.360	ENSHBUG00000002307	-	76	42.466
ENSHBUG00000006250	-	92	40.698	ENSHBUG00000013518	-	96	40.698
ENSHBUG00000006250	-	92	42.818	ENSHBUG00000012565	-	92	42.818
ENSHBUG00000006250	-	86	43.003	ENSHBUG00000019377	-	62	43.003
ENSHBUG00000006250	-	86	43.478	ENSHBUG00000008502	-	84	41.204
ENSHBUG00000006250	-	95	42.448	ENSHBUG00000015166	-	93	42.448
ENSHBUG00000006250	-	85	38.931	ENSHBUG00000018885	-	60	35.294
ENSHBUG00000006250	-	87	50.192	ENSHBUG00000006238	-	93	50.192
ENSHBUG00000006250	-	87	44.223	ENSHBUG00000011725	-	72	44.223
ENSHBUG00000006250	-	85	40.562	ENSHBUG00000013467	-	50	40.400
ENSHBUG00000006250	-	85	38.053	ENSHBUG00000006656	-	59	35.865
ENSHBUG00000006250	-	93	47.802	ENSHBUG00000015942	-	94	51.724
ENSHBUG00000006250	-	93	40.594	ENSHBUG00000009837	znf236	78	40.594
ENSHBUG00000006250	-	92	39.695	ENSHBUG00000016927	-	62	39.695
ENSHBUG00000006250	-	93	43.386	ENSHBUG00000013194	-	95	43.386
ENSHBUG00000006250	-	89	33.333	ENSHBUG00000012828	znf341	53	33.333
ENSHBUG00000006250	-	87	63.030	ENSHBUG00000020527	-	86	63.030
ENSHBUG00000006250	-	85	42.793	ENSHBUG00000018916	-	61	42.793
ENSHBUG00000006250	-	80	42.331	ENSHBUG00000013065	-	59	42.331
ENSHBUG00000006250	-	95	59.712	ENSHBUG00000000820	-	99	59.712
ENSHBUG00000006250	-	94	44.851	ENSHBUG00000003057	-	94	44.111
ENSHBUG00000006250	-	87	41.117	ENSHBUG00000022063	-	71	41.117
ENSHBUG00000006250	-	94	38.206	ENSHBUG00000015393	-	78	39.344
ENSHBUG00000006250	-	75	41.304	ENSHBUG00000004077	-	97	41.304
ENSHBUG00000006250	-	92	41.237	ENSHBUG00000002541	-	79	41.237
ENSHBUG00000006250	-	83	39.521	ENSHBUG00000012007	-	71	39.521
ENSHBUG00000006250	-	93	51.214	ENSHBUG00000015719	-	96	51.214
ENSHBUG00000006250	-	85	43.491	ENSHBUG00000012758	-	90	43.491
ENSHBUG00000006250	-	93	60.233	ENSHBUG00000005809	-	99	52.049
ENSHBUG00000006250	-	87	62.373	ENSHBUG00000006863	-	88	62.373
ENSHBUG00000006250	-	84	40.562	ENSHBUG00000002530	-	59	40.562
ENSHBUG00000006250	-	95	46.637	ENSHBUG00000006984	-	98	46.637
ENSHBUG00000006250	-	85	37.241	ENSHBUG00000016334	-	53	37.241
ENSHBUG00000006250	-	90	45.324	ENSHBUG00000011194	-	89	45.324
ENSHBUG00000006250	-	96	36.986	ENSHBUG00000021970	-	77	46.465
ENSHBUG00000006250	-	96	51.988	ENSHBUG00000013264	-	88	51.988
ENSHBUG00000006250	-	85	36.066	ENSHBUG00000019090	ZNF319	87	36.066
ENSHBUG00000006250	-	94	44.886	ENSHBUG00000006977	-	58	44.886
ENSHBUG00000006250	-	92	44.853	ENSHBUG00000015803	-	99	42.652
ENSHBUG00000006250	-	84	40.566	ENSHBUG00000009953	-	59	40.566
ENSHBUG00000006250	-	86	41.441	ENSHBUG00000002533	-	54	41.441
ENSHBUG00000006250	-	95	42.601	ENSHBUG00000013542	-	86	43.195
ENSHBUG00000006250	-	89	39.568	ENSHBUG00000012492	scrt2	51	39.568
ENSHBUG00000006250	-	94	54.985	ENSHBUG00000003449	-	90	54.985
ENSHBUG00000006250	-	93	40.385	ENSHBUG00000007316	-	69	40.385
ENSHBUG00000006250	-	91	62.411	ENSHBUG00000020544	-	84	62.411
ENSHBUG00000006250	-	88	43.318	ENSHBUG00000019800	-	97	43.318
ENSHBUG00000006250	-	82	37.631	ENSHBUG00000000731	-	61	37.631
ENSHBUG00000006250	-	85	42.969	ENSHBUG00000002393	-	54	43.612
ENSHBUG00000006250	-	81	44.103	ENSHBUG00000017869	-	73	44.103
ENSHBUG00000006250	-	93	44.889	ENSHBUG00000000146	-	94	44.889
ENSHBUG00000006250	-	87	48.837	ENSHBUG00000021003	-	94	48.837
ENSHBUG00000006250	-	88	39.200	ENSHBUG00000002878	-	53	39.200
ENSHBUG00000006250	-	99	38.667	ENSHBUG00000016384	-	86	38.667
ENSHBUG00000006250	-	82	35.759	ENSHBUG00000004217	-	61	35.777
ENSHBUG00000006250	-	96	44.737	ENSHBUG00000003165	-	81	44.889
ENSHBUG00000006250	-	92	43.066	ENSHBUG00000023209	-	96	43.066
ENSHBUG00000006250	-	89	46.411	ENSHBUG00000012215	-	91	46.411
ENSHBUG00000006250	-	94	43.902	ENSHBUG00000002889	-	68	43.902
ENSHBUG00000006250	-	88	44.944	ENSHBUG00000012984	-	77	44.286
ENSHBUG00000006250	-	79	36.301	ENSHBUG00000005726	-	61	36.301
ENSHBUG00000006250	-	95	33.333	ENSHBUG00000017542	znf526	64	31.959
ENSHBUG00000006250	-	96	42.647	ENSHBUG00000004718	-	92	43.657
ENSHBUG00000006250	-	76	34.884	ENSHBUG00000023375	prdm5	74	35.849
ENSHBUG00000006250	-	84	42.564	ENSHBUG00000011944	-	54	42.564
ENSHBUG00000006250	-	89	49.682	ENSHBUG00000002961	-	96	49.682
ENSHBUG00000006250	-	92	45.706	ENSHBUG00000017372	-	90	46.552
ENSHBUG00000006250	-	88	38.642	ENSHBUG00000016546	-	67	38.642
ENSHBUG00000006250	-	92	43.071	ENSHBUG00000012230	-	70	43.071
ENSHBUG00000006250	-	82	44.330	ENSHBUG00000020071	-	50	44.330
ENSHBUG00000006250	-	85	44.715	ENSHBUG00000017864	-	91	44.715
ENSHBUG00000006250	-	93	48.309	ENSHBUG00000009941	-	73	48.309
ENSHBUG00000006250	-	85	60.169	ENSHBUG00000017251	-	100	60.169
ENSHBUG00000006250	-	88	45.977	ENSHBUG00000007068	-	66	45.977
ENSHBUG00000006250	-	89	43.195	ENSHBUG00000007389	gfi1aa	55	43.195
ENSHBUG00000006250	-	87	64.706	ENSHBUG00000009274	-	90	64.706
ENSHBUG00000006250	-	85	37.662	ENSHBUG00000016621	scrt1b	54	37.662
ENSHBUG00000006250	-	98	42.544	ENSHBUG00000005848	-	89	42.544
ENSHBUG00000006250	-	89	41.600	ENSHBUG00000006662	-	89	41.600
ENSHBUG00000006250	-	89	45.455	ENSHBUG00000000099	-	82	45.455
ENSHBUG00000006250	-	86	32.110	ENSHBUG00000013490	-	76	40.000
ENSHBUG00000006250	-	94	38.281	ENSHBUG00000012432	-	70	38.281
ENSHBUG00000006250	-	72	42.342	ENSHBUG00000022073	-	59	42.342
ENSHBUG00000006250	-	85	48.052	ENSHBUG00000003529	-	78	48.052
ENSHBUG00000006250	-	85	35.062	ENSHBUG00000002320	-	64	35.062
ENSHBUG00000006250	-	92	32.231	ENSHBUG00000004840	znf646	99	31.690
ENSHBUG00000006250	-	81	40.299	ENSHBUG00000007764	snai2	57	40.299
ENSHBUG00000006250	-	96	32.667	ENSHBUG00000009720	-	76	34.440
ENSHBUG00000006250	-	86	35.946	ENSHBUG00000009815	znf319b	89	35.946
ENSHBUG00000006250	-	86	38.122	ENSHBUG00000014494	-	67	38.122
ENSHBUG00000006250	-	90	47.748	ENSHBUG00000021906	-	65	47.748
ENSHBUG00000006250	-	85	43.169	ENSHBUG00000002526	-	64	43.169
ENSHBUG00000006250	-	94	38.739	ENSHBUG00000002841	-	89	38.739
ENSHBUG00000006250	-	89	39.412	ENSHBUG00000021028	-	83	39.412
ENSHBUG00000006250	-	84	41.912	ENSHBUG00000015404	-	71	41.912
ENSHBUG00000006250	-	93	54.915	ENSHBUG00000014725	-	86	54.915

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000006250	-	95	51.240	ENSACIG00000017644	-	85	51.240	Amphilophus_citrinellus
ENSHBUG00000006250	-	96	52.466	ENSACLG00000000487	-	87	52.257	Astatotilapia_calliptera
ENSHBUG00000006250	-	95	60.490	ENSACLG00000003546	-	60	60.490	Astatotilapia_calliptera
ENSHBUG00000006250	-	96	54.599	ENSACLG00000002844	-	85	54.599	Astatotilapia_calliptera
ENSHBUG00000006250	-	93	57.300	ENSACLG00000000473	-	87	57.300	Astatotilapia_calliptera
ENSHBUG00000006250	-	93	56.492	ENSACLG00000022497	-	93	56.492	Astatotilapia_calliptera
ENSHBUG00000006250	-	95	58.947	ENSMZEG00005021801	-	86	58.947	Maylandia_zebra
ENSHBUG00000006250	-	85	61.605	ENSMZEG00005012727	-	67	61.605	Maylandia_zebra
ENSHBUG00000006250	-	94	91.026	ENSMZEG00005020759	-	91	96.419	Maylandia_zebra
ENSHBUG00000006250	-	92	52.394	ENSNBRG00000009815	-	86	52.394	Neolamprologus_brichardi
ENSHBUG00000006250	-	93	61.250	ENSNBRG00000001608	-	93	61.250	Neolamprologus_brichardi
ENSHBUG00000006250	-	93	64.435	ENSNBRG00000002542	-	82	64.435	Neolamprologus_brichardi
ENSHBUG00000006250	-	93	63.051	ENSONIG00000007886	-	98	60.372	Oreochromis_niloticus
ENSHBUG00000006250	-	93	64.211	ENSPNYG00000005777	-	88	64.211	Pundamilia_nyererei
ENSHBUG00000006250	-	94	55.658	ENSPNYG00000021571	-	90	59.391	Pundamilia_nyererei
ENSHBUG00000006250	-	91	63.033	ENSPNYG00000023916	-	80	63.033	Pundamilia_nyererei
ENSHBUG00000006250	-	93	60.057	ENSPNYG00000023637	-	74	59.229	Pundamilia_nyererei