EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000006284 (Gene tree)
Gene ID: 102293640
Gene Symbol: grsf1
Alias: wu:fb62c04|zgc:153305
Full Name: G-rich sequence factor 1-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 5546 bases
Position: chrJH425367.1:838843-844388
Accession: 102293640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000024716	RRM_1	PF00076.22	1.6e-29	1	2
ENSHBUP00000024716	RRM_1	PF00076.22	1.6e-29	2	2
ENSHBUP00000024718	RRM_1	PF00076.22	1.6e-29	1	2
ENSHBUP00000024718	RRM_1	PF00076.22	1.6e-29	2	2
ENSHBUP00000004939	RRM_1	PF00076.22	1e-28	1	2
ENSHBUP00000004939	RRM_1	PF00076.22	1e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000007844	-	1454	-	ENSHBUP00000004939	411 (aa)	-	-
ENSHBUT00000007827	-	1421	-	ENSHBUP00000024718	400 (aa)	-	UPI0003BCC5D1
ENSHBUT00000007834	-	1305	XM_005921933	ENSHBUP00000024716	400 (aa)	XP_005921995	UPI0003BCC5D1

Gene Model

Click here to download ENSHBUG00000006284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000006284's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000006284	grsf1	77	58.228	ENSHBUG00000018007	hnrnph3	71	58.228
ENSHBUG00000006284	grsf1	78	43.305	ENSHBUG00000010547	hnrnph1	94	43.305

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000006284	grsf1	99	71.535	ENSAPOG00000012487	grsf1	100	71.535	Acanthochromis_polyacanthus
ENSHBUG00000006284	grsf1	99	80.702	ENSACIG00000005871	grsf1	100	80.702	Amphilophus_citrinellus
ENSHBUG00000006284	grsf1	99	72.953	ENSAOCG00000017462	-	100	72.953	Amphiprion_ocellaris
ENSHBUG00000006284	grsf1	99	73.153	ENSAPEG00000007240	-	100	73.153	Amphiprion_percula
ENSHBUG00000006284	grsf1	98	68.262	ENSATEG00000007185	grsf1	99	68.262	Anabas_testudineus
ENSHBUG00000006284	grsf1	99	98.500	ENSACLG00000003685	-	100	98.500	Astatotilapia_calliptera
ENSHBUG00000006284	grsf1	87	50.926	ENSAMXG00000012270	grsf1	99	50.926	Astyanax_mexicanus
ENSHBUG00000006284	grsf1	99	60.350	ENSCSEG00000019209	-	99	60.615	Cynoglossus_semilaevis
ENSHBUG00000006284	grsf1	99	63.682	ENSCVAG00000004476	grsf1	100	63.682	Cyprinodon_variegatus
ENSHBUG00000006284	grsf1	98	46.985	ENSDARG00000053021	grsf1	94	46.985	Danio_rerio
ENSHBUG00000006284	grsf1	99	49.878	ENSFHEG00000013358	-	99	50.367	Fundulus_heteroclitus
ENSHBUG00000006284	grsf1	77	53.465	ENSGMOG00000014047	grsf1	100	53.465	Gadus_morhua
ENSHBUG00000006284	grsf1	99	62.716	ENSGAFG00000004496	grsf1	99	62.716	Gambusia_affinis
ENSHBUG00000006284	grsf1	77	63.777	ENSGACG00000014447	grsf1	97	63.777	Gasterosteus_aculeatus
ENSHBUG00000006284	grsf1	99	58.561	ENSHCOG00000007715	-	99	58.561	Hippocampus_comes
ENSHBUG00000006284	grsf1	80	55.418	ENSIPUG00000010533	grsf1	84	55.418	Ictalurus_punctatus
ENSHBUG00000006284	grsf1	99	60.427	ENSKMAG00000004528	grsf1	100	60.427	Kryptolebias_marmoratus
ENSHBUG00000006284	grsf1	76	58.389	ENSLBEG00000018100	grsf1	95	58.416	Labrus_bergylta
ENSHBUG00000006284	grsf1	99	68.408	ENSMAMG00000002627	grsf1	99	68.408	Mastacembelus_armatus
ENSHBUG00000006284	grsf1	99	98.750	ENSMZEG00005020633	-	100	98.750	Maylandia_zebra
ENSHBUG00000006284	grsf1	97	65.000	ENSMMOG00000014231	grsf1	100	64.232	Mola_mola
ENSHBUG00000006284	grsf1	99	66.184	ENSMALG00000000251	grsf1	100	66.184	Monopterus_albus
ENSHBUG00000006284	grsf1	99	96.594	ENSNBRG00000017774	grsf1	100	96.594	Neolamprologus_brichardi
ENSHBUG00000006284	grsf1	99	94.500	ENSONIG00000014119	grsf1	100	94.500	Oreochromis_niloticus
ENSHBUG00000006284	grsf1	99	63.038	ENSORLG00000030211	grsf1	99	63.038	Oryzias_latipes
ENSHBUG00000006284	grsf1	99	62.532	ENSORLG00020014383	grsf1	99	62.025	Oryzias_latipes_hni
ENSHBUG00000006284	grsf1	99	62.690	ENSORLG00015006520	grsf1	99	62.944	Oryzias_latipes_hsok
ENSHBUG00000006284	grsf1	89	67.606	ENSOMEG00000009181	grsf1	99	64.467	Oryzias_melastigma
ENSHBUG00000006284	grsf1	83	56.250	ENSPKIG00000019432	grsf1	79	56.119	Paramormyrops_kingsleyae
ENSHBUG00000006284	grsf1	82	65.075	ENSPMGG00000013654	grsf1	92	65.075	Periophthalmus_magnuspinnatus
ENSHBUG00000006284	grsf1	99	61.275	ENSPFOG00000006122	grsf1	99	62.044	Poecilia_formosa
ENSHBUG00000006284	grsf1	99	61.765	ENSPLAG00000020977	grsf1	99	62.654	Poecilia_latipinna
ENSHBUG00000006284	grsf1	99	62.592	ENSPMEG00000012485	grsf1	99	62.287	Poecilia_mexicana
ENSHBUG00000006284	grsf1	99	62.439	ENSPREG00000013383	grsf1	99	62.195	Poecilia_reticulata
ENSHBUG00000006284	grsf1	99	98.000	ENSPNYG00000005379	grsf1	100	98.000	Pundamilia_nyererei
ENSHBUG00000006284	grsf1	87	54.062	ENSPNAG00000014912	grsf1	85	54.062	Pygocentrus_nattereri
ENSHBUG00000006284	grsf1	82	47.590	ENSSFOG00015014620	grsf1	83	47.590	Scleropages_formosus
ENSHBUG00000006284	grsf1	99	64.220	ENSSMAG00000014181	grsf1	88	64.220	Scophthalmus_maximus
ENSHBUG00000006284	grsf1	99	63.391	ENSSDUG00000009397	-	98	70.000	Seriola_dumerili
ENSHBUG00000006284	grsf1	99	65.111	ENSSLDG00000025494	grsf1	100	65.111	Seriola_lalandi_dorsalis
ENSHBUG00000006284	grsf1	99	66.253	ENSSPAG00000023296	grsf1	99	66.253	Stegastes_partitus
ENSHBUG00000006284	grsf1	96	59.326	ENSTRUG00000015354	grsf1	99	59.296	Takifugu_rubripes
ENSHBUG00000006284	grsf1	80	62.893	ENSTNIG00000015350	-	100	63.522	Tetraodon_nigroviridis
ENSHBUG00000006284	grsf1	99	62.683	ENSXMAG00000029710	grsf1	100	62.683	Xiphophorus_maculatus