EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000006584 (Gene tree)
Gene ID: 102297451
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 9082 bases
Position: chrJH425344.1:231534-240615
Accession: 102297451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000005204	RRM_1	PF00076.22	1.2e-10	1	1
ENSHBUP00000005204	RRM_3	PF08777.11	3.7e-24	1	1
ENSHBUP00000005204	La	PF05383.17	6.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000007394	-	2975	XM_005918148	ENSHBUP00000005204	393 (aa)	XP_005918210	UPI0003BD6EC8

Gene Model

Click here to download ENSHBUG00000006584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000006584's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000006584	ssb	100	53.563	ENSG00000138385	SSB	98	65.254	Homo_sapiens
ENSHBUG00000006584	ssb	100	78.697	ENSAPOG00000003448	ssb	100	78.446	Acanthochromis_polyacanthus
ENSHBUG00000006584	ssb	100	51.551	ENSAMEG00000010507	SSB	99	51.790	Ailuropoda_melanoleuca
ENSHBUG00000006584	ssb	94	85.984	ENSACIG00000001738	ssb	98	85.984	Amphilophus_citrinellus
ENSHBUG00000006584	ssb	100	78.697	ENSAOCG00000020398	ssb	100	78.947	Amphiprion_ocellaris
ENSHBUG00000006584	ssb	100	78.697	ENSAPEG00000020395	ssb	100	78.947	Amphiprion_percula
ENSHBUG00000006584	ssb	100	79.500	ENSATEG00000016884	ssb	100	79.750	Anabas_testudineus
ENSHBUG00000006584	ssb	100	52.133	ENSAPLG00000006109	SSB	99	52.133	Anas_platyrhynchos
ENSHBUG00000006584	ssb	100	52.956	ENSACAG00000017008	SSB	99	52.709	Anolis_carolinensis
ENSHBUG00000006584	ssb	100	50.000	ENSANAG00000027195	-	99	49.752	Aotus_nancymaae
ENSHBUG00000006584	ssb	100	98.982	ENSACLG00000010798	ssb	100	98.982	Astatotilapia_calliptera
ENSHBUG00000006584	ssb	100	58.049	ENSAMXG00000012606	ssb	100	58.537	Astyanax_mexicanus
ENSHBUG00000006584	ssb	100	54.094	ENSBTAG00000008716	SSB	99	54.342	Bos_taurus
ENSHBUG00000006584	ssb	100	54.703	ENSCJAG00000045073	SSB	99	54.950	Callithrix_jacchus
ENSHBUG00000006584	ssb	100	53.827	ENSCAFG00000012418	SSB	99	54.074	Canis_familiaris
ENSHBUG00000006584	ssb	100	53.827	ENSCAFG00020002900	SSB	99	54.074	Canis_lupus_dingo
ENSHBUG00000006584	ssb	100	53.960	ENSCHIG00000022624	-	99	54.208	Capra_hircus
ENSHBUG00000006584	ssb	100	50.248	ENSCHIG00000022196	-	99	50.627	Capra_hircus
ENSHBUG00000006584	ssb	99	53.598	ENSTSYG00000000097	SSB	99	53.846	Carlito_syrichta
ENSHBUG00000006584	ssb	100	54.208	ENSCPOG00000003338	SSB	99	54.455	Cavia_porcellus
ENSHBUG00000006584	ssb	100	54.455	ENSCCAG00000035147	SSB	99	54.703	Cebus_capucinus
ENSHBUG00000006584	ssb	71	49.481	ENSCATG00000036701	SSB	83	49.827	Cercocebus_atys
ENSHBUG00000006584	ssb	99	42.065	ENSCATG00000042909	-	97	42.065	Cercocebus_atys
ENSHBUG00000006584	ssb	100	53.960	ENSCLAG00000015617	-	99	54.208	Chinchilla_lanigera
ENSHBUG00000006584	ssb	100	54.208	ENSCSAG00000015200	SSB	88	54.455	Chlorocebus_sabaeus
ENSHBUG00000006584	ssb	96	50.000	ENSCSAG00000018390	-	97	50.000	Chlorocebus_sabaeus
ENSHBUG00000006584	ssb	100	55.198	ENSCHOG00000007763	SSB	99	55.446	Choloepus_hoffmanni
ENSHBUG00000006584	ssb	100	56.127	ENSCPBG00000006519	SSB	99	56.373	Chrysemys_picta_bellii
ENSHBUG00000006584	ssb	100	48.139	ENSCANG00000033240	-	99	47.643	Colobus_angolensis_palliatus
ENSHBUG00000006584	ssb	98	43.890	ENSCANG00000028838	-	95	43.392	Colobus_angolensis_palliatus
ENSHBUG00000006584	ssb	100	54.208	ENSCANG00000027695	SSB	99	54.455	Colobus_angolensis_palliatus
ENSHBUG00000006584	ssb	100	50.860	ENSCGRG00001024831	Ssb	99	50.860	Cricetulus_griseus_chok1gshd
ENSHBUG00000006584	ssb	100	50.860	ENSCGRG00000005387	Ssb	99	50.860	Cricetulus_griseus_crigri
ENSHBUG00000006584	ssb	99	75.188	ENSCSEG00000011599	ssb	99	75.940	Cynoglossus_semilaevis
ENSHBUG00000006584	ssb	100	74.564	ENSCVAG00000021558	ssb	100	76.559	Cyprinodon_variegatus
ENSHBUG00000006584	ssb	100	60.050	ENSDARG00000029252	ssb	100	59.305	Danio_rerio
ENSHBUG00000006584	ssb	100	54.208	ENSDNOG00000013450	SSB	99	54.455	Dasypus_novemcinctus
ENSHBUG00000006584	ssb	100	51.351	ENSDORG00000005543	Ssb	99	51.351	Dipodomys_ordii
ENSHBUG00000006584	ssb	86	34.078	FBgn0011638	La	78	37.421	Drosophila_melanogaster
ENSHBUG00000006584	ssb	51	61.386	ENSETEG00000004614	-	52	61.386	Echinops_telfairi
ENSHBUG00000006584	ssb	92	44.536	ENSEBUG00000001237	ssb	81	47.319	Eptatretus_burgeri
ENSHBUG00000006584	ssb	100	54.950	ENSEASG00005022835	SSB	99	55.198	Equus_asinus_asinus
ENSHBUG00000006584	ssb	100	54.950	ENSECAG00000018495	SSB	99	55.198	Equus_caballus
ENSHBUG00000006584	ssb	78	48.052	ENSEEUG00000008077	SSB	78	48.052	Erinaceus_europaeus
ENSHBUG00000006584	ssb	100	66.667	ENSELUG00000020929	ssb	100	66.915	Esox_lucius
ENSHBUG00000006584	ssb	100	54.568	ENSFCAG00000011601	SSB	99	54.815	Felis_catus
ENSHBUG00000006584	ssb	99	54.591	ENSFALG00000000930	SSB	99	54.591	Ficedula_albicollis
ENSHBUG00000006584	ssb	100	54.455	ENSFDAG00000000598	SSB	99	54.703	Fukomys_damarensis
ENSHBUG00000006584	ssb	74	71.429	ENSFHEG00000003268	ssb	95	68.182	Fundulus_heteroclitus
ENSHBUG00000006584	ssb	98	69.000	ENSGMOG00000002664	ssb	100	69.000	Gadus_morhua
ENSHBUG00000006584	ssb	99	55.335	ENSGALG00000009677	SSB	99	54.726	Gallus_gallus
ENSHBUG00000006584	ssb	100	74.505	ENSGAFG00000002749	ssb	100	75.495	Gambusia_affinis
ENSHBUG00000006584	ssb	100	75.556	ENSGACG00000005107	ssb	100	75.556	Gasterosteus_aculeatus
ENSHBUG00000006584	ssb	100	55.637	ENSGAGG00000007807	SSB	99	55.882	Gopherus_agassizii
ENSHBUG00000006584	ssb	53	47.945	ENSGGOG00000023471	-	89	48.402	Gorilla_gorilla
ENSHBUG00000006584	ssb	100	46.798	ENSGGOG00000024891	-	99	46.535	Gorilla_gorilla
ENSHBUG00000006584	ssb	98	50.508	ENSHGLG00000004478	-	97	50.508	Heterocephalus_glaber_female
ENSHBUG00000006584	ssb	100	47.891	ENSHGLG00000005832	-	99	48.000	Heterocephalus_glaber_female
ENSHBUG00000006584	ssb	100	53.285	ENSHGLG00000017580	-	99	53.528	Heterocephalus_glaber_female
ENSHBUG00000006584	ssb	100	53.285	ENSHGLG00100003084	-	99	53.528	Heterocephalus_glaber_male
ENSHBUG00000006584	ssb	100	49.380	ENSHGLG00100008767	-	99	49.254	Heterocephalus_glaber_male
ENSHBUG00000006584	ssb	99	73.618	ENSHCOG00000019011	ssb	99	74.619	Hippocampus_comes
ENSHBUG00000006584	ssb	100	60.732	ENSIPUG00000003681	SSB	100	60.000	Ictalurus_punctatus
ENSHBUG00000006584	ssb	100	54.208	ENSSTOG00000008416	SSB	99	54.094	Ictidomys_tridecemlineatus
ENSHBUG00000006584	ssb	91	43.370	ENSJJAG00000016250	-	94	43.820	Jaculus_jaculus
ENSHBUG00000006584	ssb	100	49.048	ENSJJAG00000023158	-	99	49.048	Jaculus_jaculus
ENSHBUG00000006584	ssb	100	76.190	ENSKMAG00000017317	ssb	100	76.190	Kryptolebias_marmoratus
ENSHBUG00000006584	ssb	100	77.193	ENSLBEG00000017345	ssb	100	77.193	Labrus_bergylta
ENSHBUG00000006584	ssb	99	53.616	ENSLACG00000014056	SSB	98	53.367	Latimeria_chalumnae
ENSHBUG00000006584	ssb	100	63.300	ENSLOCG00000007933	ssb	99	63.300	Lepisosteus_oculatus
ENSHBUG00000006584	ssb	100	52.257	ENSLAFG00000000867	-	99	52.494	Loxodonta_africana
ENSHBUG00000006584	ssb	76	43.624	ENSLAFG00000026721	-	98	43.624	Loxodonta_africana
ENSHBUG00000006584	ssb	100	48.120	ENSLAFG00000028909	-	99	47.619	Loxodonta_africana
ENSHBUG00000006584	ssb	100	54.208	ENSMFAG00000039066	SSB	99	54.455	Macaca_fascicularis
ENSHBUG00000006584	ssb	90	46.797	ENSMFAG00000041478	-	91	49.544	Macaca_fascicularis
ENSHBUG00000006584	ssb	100	54.208	ENSMMUG00000023051	SSB	99	54.455	Macaca_mulatta
ENSHBUG00000006584	ssb	100	47.500	ENSMMUG00000011724	-	97	47.500	Macaca_mulatta
ENSHBUG00000006584	ssb	99	40.050	ENSMMUG00000039889	-	98	40.302	Macaca_mulatta
ENSHBUG00000006584	ssb	100	46.569	ENSMNEG00000028321	SSB	85	66.087	Macaca_nemestrina
ENSHBUG00000006584	ssb	90	46.797	ENSMNEG00000034698	-	91	49.544	Macaca_nemestrina
ENSHBUG00000006584	ssb	100	54.208	ENSMLEG00000035717	SSB	88	66.087	Mandrillus_leucophaeus
ENSHBUG00000006584	ssb	100	38.095	ENSMLEG00000042644	-	99	38.095	Mandrillus_leucophaeus
ENSHBUG00000006584	ssb	100	79.198	ENSMAMG00000004800	ssb	100	79.699	Mastacembelus_armatus
ENSHBUG00000006584	ssb	100	98.982	ENSMZEG00005005749	ssb	100	98.982	Maylandia_zebra
ENSHBUG00000006584	ssb	99	54.591	ENSMGAG00000010328	SSB	100	61.353	Meleagris_gallopavo
ENSHBUG00000006584	ssb	100	54.703	ENSMICG00000028252	-	99	54.950	Microcebus_murinus
ENSHBUG00000006584	ssb	98	50.129	ENSMICG00000033304	-	95	51.872	Microcebus_murinus
ENSHBUG00000006584	ssb	100	51.707	ENSMODG00000008227	-	99	52.555	Monodelphis_domestica
ENSHBUG00000006584	ssb	94	45.455	ENSMODG00000019271	-	99	44.913	Monodelphis_domestica
ENSHBUG00000006584	ssb	100	41.832	ENSMODG00000007027	-	99	42.327	Monodelphis_domestica
ENSHBUG00000006584	ssb	91	79.121	ENSMALG00000008045	ssb	90	78.763	Monopterus_albus
ENSHBUG00000006584	ssb	100	48.681	MGP_CAROLIEiJ_G0023629	-	98	61.783	Mus_caroli
ENSHBUG00000006584	ssb	100	48.681	ENSMUSG00000068882	Ssb	98	61.783	Mus_musculus
ENSHBUG00000006584	ssb	100	48.798	MGP_PahariEiJ_G0025081	-	98	61.146	Mus_pahari
ENSHBUG00000006584	ssb	100	48.681	MGP_SPRETEiJ_G0024551	Ssb	98	61.783	Mus_spretus
ENSHBUG00000006584	ssb	100	54.703	ENSMPUG00000000785	SSB	99	54.950	Mustela_putorius_furo
ENSHBUG00000006584	ssb	100	53.012	ENSMLUG00000016316	SSB	99	52.530	Myotis_lucifugus
ENSHBUG00000006584	ssb	100	97.970	ENSNBRG00000012661	ssb	100	97.970	Neolamprologus_brichardi
ENSHBUG00000006584	ssb	100	53.960	ENSNLEG00000004958	SSB	99	54.208	Nomascus_leucogenys
ENSHBUG00000006584	ssb	87	42.857	ENSNLEG00000028754	-	78	44.073	Nomascus_leucogenys
ENSHBUG00000006584	ssb	63	60.800	ENSMEUG00000001650	-	100	60.800	Notamacropus_eugenii
ENSHBUG00000006584	ssb	93	53.117	ENSODEG00000004202	-	99	52.846	Octodon_degus
ENSHBUG00000006584	ssb	100	94.670	ENSONIG00000008776	ssb	100	94.670	Oreochromis_niloticus
ENSHBUG00000006584	ssb	97	54.592	ENSOANG00000008543	SSB	96	55.612	Ornithorhynchus_anatinus
ENSHBUG00000006584	ssb	100	54.455	ENSOCUG00000010396	SSB	99	54.703	Oryctolagus_cuniculus
ENSHBUG00000006584	ssb	100	75.561	ENSORLG00000017208	ssb	100	76.309	Oryzias_latipes
ENSHBUG00000006584	ssb	100	75.373	ENSORLG00020022574	ssb	100	76.119	Oryzias_latipes_hni
ENSHBUG00000006584	ssb	100	76.309	ENSORLG00015016592	ssb	100	76.808	Oryzias_latipes_hsok
ENSHBUG00000006584	ssb	100	76.309	ENSOMEG00000003193	ssb	100	75.062	Oryzias_melastigma
ENSHBUG00000006584	ssb	100	51.781	ENSOGAG00000029768	SSB	99	51.306	Otolemur_garnettii
ENSHBUG00000006584	ssb	100	53.960	ENSOARG00000002906	SSB	99	54.208	Ovis_aries
ENSHBUG00000006584	ssb	100	53.563	ENSPPAG00000042673	SSB	99	53.808	Pan_paniscus
ENSHBUG00000006584	ssb	97	43.445	ENSPPAG00000006189	-	96	43.445	Pan_paniscus
ENSHBUG00000006584	ssb	100	47.044	ENSPPAG00000032427	-	100	57.364	Pan_paniscus
ENSHBUG00000006584	ssb	100	54.568	ENSPPRG00000006599	SSB	99	54.815	Panthera_pardus
ENSHBUG00000006584	ssb	100	54.568	ENSPTIG00000011021	SSB	97	54.815	Panthera_tigris_altaica
ENSHBUG00000006584	ssb	100	45.320	ENSPTRG00000042880	-	99	45.297	Pan_troglodytes
ENSHBUG00000006584	ssb	100	53.563	ENSPTRG00000012620	SSB	99	53.808	Pan_troglodytes
ENSHBUG00000006584	ssb	100	54.208	ENSPANG00000007440	SSB	99	54.455	Papio_anubis
ENSHBUG00000006584	ssb	99	41.117	ENSPANG00000034126	-	97	40.967	Papio_anubis
ENSHBUG00000006584	ssb	96	38.021	ENSPANG00000031877	-	92	38.021	Papio_anubis
ENSHBUG00000006584	ssb	100	66.915	ENSPKIG00000019325	ssb	99	67.164	Paramormyrops_kingsleyae
ENSHBUG00000006584	ssb	100	56.127	ENSPSIG00000002265	SSB	93	56.863	Pelodiscus_sinensis
ENSHBUG00000006584	ssb	84	70.414	ENSPMGG00000020075	ssb	92	67.989	Periophthalmus_magnuspinnatus
ENSHBUG00000006584	ssb	82	45.260	ENSPMAG00000002982	ssb	90	43.928	Petromyzon_marinus
ENSHBUG00000006584	ssb	93	55.348	ENSPCIG00000028591	-	99	53.333	Phascolarctos_cinereus
ENSHBUG00000006584	ssb	100	75.561	ENSPFOG00000009650	ssb	100	75.561	Poecilia_formosa
ENSHBUG00000006584	ssb	100	74.813	ENSPLAG00000020498	ssb	100	75.373	Poecilia_latipinna
ENSHBUG00000006584	ssb	100	75.561	ENSPMEG00000001051	ssb	100	75.561	Poecilia_mexicana
ENSHBUG00000006584	ssb	92	76.694	ENSPREG00000003708	ssb	97	76.694	Poecilia_reticulata
ENSHBUG00000006584	ssb	100	53.960	ENSPPYG00000012919	SSB	99	54.208	Pongo_abelii
ENSHBUG00000006584	ssb	95	52.618	ENSPCAG00000010276	SSB	99	52.880	Procavia_capensis
ENSHBUG00000006584	ssb	100	51.980	ENSPCOG00000015741	-	92	63.793	Propithecus_coquereli
ENSHBUG00000006584	ssb	100	48.515	ENSPCOG00000023189	-	99	48.762	Propithecus_coquereli
ENSHBUG00000006584	ssb	88	55.271	ENSPVAG00000006615	SSB	99	55.271	Pteropus_vampyrus
ENSHBUG00000006584	ssb	100	98.982	ENSPNYG00000006444	ssb	100	98.982	Pundamilia_nyererei
ENSHBUG00000006584	ssb	83	64.526	ENSPNAG00000011708	ssb	100	58.088	Pygocentrus_nattereri
ENSHBUG00000006584	ssb	100	50.248	ENSRNOG00000011606	AABR07061825.1	99	49.505	Rattus_norvegicus
ENSHBUG00000006584	ssb	100	49.161	ENSRNOG00000007998	Ssb	99	49.400	Rattus_norvegicus
ENSHBUG00000006584	ssb	86	50.872	ENSRBIG00000041608	-	94	50.872	Rhinopithecus_bieti
ENSHBUG00000006584	ssb	94	46.032	ENSRBIG00000041232	-	98	46.154	Rhinopithecus_bieti
ENSHBUG00000006584	ssb	100	47.059	ENSRBIG00000041972	SSB	88	66.087	Rhinopithecus_bieti
ENSHBUG00000006584	ssb	99	40.452	ENSRBIG00000029918	-	97	40.452	Rhinopithecus_bieti
ENSHBUG00000006584	ssb	98	46.954	ENSRROG00000031684	-	88	58.784	Rhinopithecus_roxellana
ENSHBUG00000006584	ssb	99	45.729	ENSRROG00000007149	-	97	45.729	Rhinopithecus_roxellana
ENSHBUG00000006584	ssb	100	54.208	ENSRROG00000040346	SSB	99	54.455	Rhinopithecus_roxellana
ENSHBUG00000006584	ssb	86	52.299	ENSRROG00000034102	-	85	52.586	Rhinopithecus_roxellana
ENSHBUG00000006584	ssb	100	54.208	ENSSBOG00000027204	SSB	99	54.455	Saimiri_boliviensis_boliviensis
ENSHBUG00000006584	ssb	100	54.074	ENSSHAG00000018062	SSB	99	54.074	Sarcophilus_harrisii
ENSHBUG00000006584	ssb	100	64.444	ENSSFOG00015000550	ssb	99	63.457	Scleropages_formosus
ENSHBUG00000006584	ssb	100	76.845	ENSSMAG00000013885	ssb	99	79.189	Scophthalmus_maximus
ENSHBUG00000006584	ssb	100	80.702	ENSSDUG00000020117	ssb	100	80.952	Seriola_dumerili
ENSHBUG00000006584	ssb	100	77.330	ENSSLDG00000002525	ssb	100	77.582	Seriola_lalandi_dorsalis
ENSHBUG00000006584	ssb	95	49.081	ENSSARG00000007747	SSB	99	49.081	Sorex_araneus
ENSHBUG00000006584	ssb	100	55.911	ENSSPUG00000012112	SSB	99	56.049	Sphenodon_punctatus
ENSHBUG00000006584	ssb	100	77.694	ENSSPAG00000005696	ssb	100	77.945	Stegastes_partitus
ENSHBUG00000006584	ssb	93	52.139	ENSSSCG00000015938	SSB	81	54.711	Sus_scrofa
ENSHBUG00000006584	ssb	99	53.333	ENSTGUG00000007942	SSB	99	53.827	Taeniopygia_guttata
ENSHBUG00000006584	ssb	100	74.307	ENSTRUG00000017839	ssb	100	74.307	Takifugu_rubripes
ENSHBUG00000006584	ssb	92	74.380	ENSTNIG00000000915	ssb	100	73.130	Tetraodon_nigroviridis
ENSHBUG00000006584	ssb	82	66.087	ENSTBEG00000009056	SSB	81	66.087	Tupaia_belangeri
ENSHBUG00000006584	ssb	100	55.309	ENSTTRG00000002152	SSB	99	55.556	Tursiops_truncatus
ENSHBUG00000006584	ssb	93	55.080	ENSUAMG00000027833	SSB	98	55.348	Ursus_americanus
ENSHBUG00000006584	ssb	100	53.580	ENSUMAG00000013907	SSB	99	53.827	Ursus_maritimus
ENSHBUG00000006584	ssb	100	54.342	ENSVPAG00000007183	SSB	99	54.591	Vicugna_pacos
ENSHBUG00000006584	ssb	100	53.827	ENSVVUG00000016573	SSB	77	54.074	Vulpes_vulpes
ENSHBUG00000006584	ssb	99	50.469	ENSXETG00000025402	ssb	99	50.469	Xenopus_tropicalis
ENSHBUG00000006584	ssb	92	71.003	ENSXCOG00000019109	ssb	97	71.003	Xiphophorus_couchianus
ENSHBUG00000006584	ssb	100	72.772	ENSXMAG00000004888	ssb	100	72.772	Xiphophorus_maculatus