EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000006656 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 4827 bases
Position: chrJH425569.1:696037-700863
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000005264	zf-C2H2	PF00096.26	7.8e-34	1	7
ENSHBUP00000005264	zf-C2H2	PF00096.26	7.8e-34	2	7
ENSHBUP00000005264	zf-C2H2	PF00096.26	7.8e-34	3	7
ENSHBUP00000005264	zf-C2H2	PF00096.26	7.8e-34	4	7
ENSHBUP00000005264	zf-C2H2	PF00096.26	7.8e-34	5	7
ENSHBUP00000005264	zf-C2H2	PF00096.26	7.8e-34	6	7
ENSHBUP00000005264	zf-C2H2	PF00096.26	7.8e-34	7	7
ENSHBUP00000005264	zf-met	PF12874.7	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000007285	-	2212	-	ENSHBUP00000005264	426 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000006656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000006656's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000006656	-	75	37.054	ENSHBUG00000002878	-	68	34.737
ENSHBUG00000006656	-	62	52.500	ENSHBUG00000013194	-	84	39.041
ENSHBUG00000006656	-	72	40.667	ENSHBUG00000001075	-	94	40.667
ENSHBUG00000006656	-	61	36.400	ENSHBUG00000016927	-	60	35.669
ENSHBUG00000006656	-	56	47.619	ENSHBUG00000021906	-	64	47.619
ENSHBUG00000006656	-	61	33.871	ENSHBUG00000012828	znf341	52	33.871
ENSHBUG00000006656	-	60	38.017	ENSHBUG00000006863	-	88	38.017
ENSHBUG00000006656	-	60	38.723	ENSHBUG00000021003	-	93	38.723
ENSHBUG00000006656	-	60	39.394	ENSHBUG00000003165	-	61	39.394
ENSHBUG00000006656	-	61	42.586	ENSHBUG00000012565	-	86	42.586
ENSHBUG00000006656	-	69	39.130	ENSHBUG00000002841	-	88	43.956
ENSHBUG00000006656	-	59	46.875	ENSHBUG00000021028	-	88	37.344
ENSHBUG00000006656	-	67	38.144	ENSHBUG00000002530	-	61	37.500
ENSHBUG00000006656	-	67	37.241	ENSHBUG00000002533	-	59	37.241
ENSHBUG00000006656	-	68	42.342	ENSHBUG00000000636	-	69	41.071
ENSHBUG00000006656	-	71	38.430	ENSHBUG00000002961	-	97	38.430
ENSHBUG00000006656	-	61	39.207	ENSHBUG00000012230	-	71	39.207
ENSHBUG00000006656	-	61	48.148	ENSHBUG00000015942	-	96	43.697
ENSHBUG00000006656	-	62	32.061	ENSHBUG00000017445	zbtb41	52	32.061
ENSHBUG00000006656	-	64	41.509	ENSHBUG00000006977	-	52	41.509
ENSHBUG00000006656	-	60	46.667	ENSHBUG00000012215	-	95	41.935
ENSHBUG00000006656	-	57	41.958	ENSHBUG00000000820	-	93	41.958
ENSHBUG00000006656	-	64	36.364	ENSHBUG00000015719	-	96	36.364
ENSHBUG00000006656	-	53	40.449	ENSHBUG00000004077	-	97	40.449
ENSHBUG00000006656	-	60	43.704	ENSHBUG00000002307	-	73	43.704
ENSHBUG00000006656	-	67	35.833	ENSHBUG00000000099	-	90	40.351
ENSHBUG00000006656	-	59	35.865	ENSHBUG00000006250	-	85	38.053
ENSHBUG00000006656	-	65	43.066	ENSHBUG00000020544	-	98	43.066
ENSHBUG00000006656	-	60	36.000	ENSHBUG00000005848	-	87	45.455
ENSHBUG00000006656	-	70	40.761	ENSHBUG00000004718	-	94	40.761
ENSHBUG00000006656	-	61	34.855	ENSHBUG00000016546	-	63	34.855
ENSHBUG00000006656	-	60	38.136	ENSHBUG00000014725	-	87	38.075
ENSHBUG00000006656	-	83	38.889	ENSHBUG00000019377	-	84	38.889
ENSHBUG00000006656	-	57	36.667	ENSHBUG00000015393	-	75	36.667
ENSHBUG00000006656	-	71	40.167	ENSHBUG00000015803	-	97	36.434
ENSHBUG00000006656	-	60	40.789	ENSHBUG00000020071	-	53	40.789
ENSHBUG00000006656	-	58	37.549	ENSHBUG00000013292	-	65	37.553
ENSHBUG00000006656	-	64	35.526	ENSHBUG00000013296	-	96	35.526
ENSHBUG00000006656	-	62	39.256	ENSHBUG00000003449	-	90	39.256
ENSHBUG00000006656	-	61	39.437	ENSHBUG00000011725	-	64	39.437
ENSHBUG00000006656	-	68	44.000	ENSHBUG00000012007	-	80	33.725
ENSHBUG00000006656	-	73	34.409	ENSHBUG00000007316	-	69	42.424
ENSHBUG00000006656	-	65	39.015	ENSHBUG00000000146	-	86	39.015
ENSHBUG00000006656	-	90	35.628	ENSHBUG00000012432	-	95	35.628
ENSHBUG00000006656	-	52	39.506	ENSHBUG00000022878	prdm12b	50	39.506
ENSHBUG00000006656	-	60	37.190	ENSHBUG00000013264	-	86	37.190
ENSHBUG00000006656	-	62	33.750	ENSHBUG00000017542	znf526	50	33.750
ENSHBUG00000006656	-	57	38.333	ENSHBUG00000013467	-	54	38.333
ENSHBUG00000006656	-	57	39.855	ENSHBUG00000018885	-	56	39.855
ENSHBUG00000006656	-	71	47.458	ENSHBUG00000017864	-	96	47.458
ENSHBUG00000006656	-	65	37.264	ENSHBUG00000017869	-	85	32.364
ENSHBUG00000006656	-	56	35.391	ENSHBUG00000016384	-	58	35.391
ENSHBUG00000006656	-	56	41.818	ENSHBUG00000023209	-	91	41.818
ENSHBUG00000006656	-	56	39.669	ENSHBUG00000007068	-	59	40.833
ENSHBUG00000006656	-	59	40.183	ENSHBUG00000002541	-	65	40.183
ENSHBUG00000006656	-	61	39.873	ENSHBUG00000009953	-	54	39.873
ENSHBUG00000006656	-	61	38.400	ENSHBUG00000012984	-	69	38.400
ENSHBUG00000006656	-	91	35.565	ENSHBUG00000002320	-	71	35.685
ENSHBUG00000006656	-	60	40.449	ENSHBUG00000006984	-	95	40.449
ENSHBUG00000006656	-	64	40.625	ENSHBUG00000020527	-	94	40.625
ENSHBUG00000006656	-	55	45.926	ENSHBUG00000011194	-	87	45.926
ENSHBUG00000006656	-	65	38.211	ENSHBUG00000003057	-	91	41.509
ENSHBUG00000006656	-	56	37.736	ENSHBUG00000002393	-	52	37.736
ENSHBUG00000006656	-	61	43.066	ENSHBUG00000013065	-	60	43.066
ENSHBUG00000006656	-	78	34.010	ENSHBUG00000015226	-	64	35.185
ENSHBUG00000006656	-	84	38.889	ENSHBUG00000019101	-	75	38.889
ENSHBUG00000006656	-	55	37.013	ENSHBUG00000005451	gfi1b	54	37.013
ENSHBUG00000006656	-	63	39.189	ENSHBUG00000019800	-	94	39.189
ENSHBUG00000006656	-	62	42.657	ENSHBUG00000009274	-	90	42.657
ENSHBUG00000006656	-	58	36.100	ENSHBUG00000023375	prdm5	76	36.100
ENSHBUG00000006656	-	60	30.714	ENSHBUG00000009720	-	65	30.714
ENSHBUG00000006656	-	60	35.196	ENSHBUG00000008502	-	82	35.196
ENSHBUG00000006656	-	55	36.250	ENSHBUG00000000731	-	55	36.250
ENSHBUG00000006656	-	62	36.735	ENSHBUG00000004217	-	66	36.735
ENSHBUG00000006656	-	57	35.632	ENSHBUG00000006662	-	62	35.270
ENSHBUG00000006656	-	67	43.056	ENSHBUG00000015166	-	85	43.056
ENSHBUG00000006656	-	84	38.800	ENSHBUG00000002526	-	82	39.437
ENSHBUG00000006656	-	55	37.963	ENSHBUG00000016621	scrt1b	59	37.963
ENSHBUG00000006656	-	57	41.935	ENSHBUG00000023077	-	50	41.935
ENSHBUG00000006656	-	61	35.606	ENSHBUG00000007764	snai2	60	35.606
ENSHBUG00000006656	-	59	45.882	ENSHBUG00000018916	-	61	45.122
ENSHBUG00000006656	-	60	36.667	ENSHBUG00000013518	-	92	36.667
ENSHBUG00000006656	-	65	37.190	ENSHBUG00000004840	znf646	72	37.190
ENSHBUG00000006656	-	65	36.882	ENSHBUG00000005809	-	96	40.000
ENSHBUG00000006656	-	64	45.283	ENSHBUG00000009837	znf236	62	45.283
ENSHBUG00000006656	-	81	36.054	ENSHBUG00000017924	-	68	36.054
ENSHBUG00000006656	-	60	36.893	ENSHBUG00000005726	-	54	36.893
ENSHBUG00000006656	-	62	38.983	ENSHBUG00000013490	-	80	36.667
ENSHBUG00000006656	-	54	40.000	ENSHBUG00000011944	-	54	40.000
ENSHBUG00000006656	-	61	38.914	ENSHBUG00000009941	-	60	35.865
ENSHBUG00000006656	-	51	46.296	ENSHBUG00000003529	-	86	46.296
ENSHBUG00000006656	-	65	42.667	ENSHBUG00000017372	-	99	38.326
ENSHBUG00000006656	-	59	41.818	ENSHBUG00000021970	-	85	32.444
ENSHBUG00000006656	-	85	40.496	ENSHBUG00000013542	-	68	38.806
ENSHBUG00000006656	-	59	37.267	ENSHBUG00000006238	-	93	37.267
ENSHBUG00000006656	-	58	40.373	ENSHBUG00000022063	-	67	39.241
ENSHBUG00000006656	-	59	35.833	ENSHBUG00000017251	-	100	35.833
ENSHBUG00000006656	-	63	41.667	ENSHBUG00000012758	-	89	41.667
ENSHBUG00000006656	-	65	32.824	ENSHBUG00000015404	-	66	32.824
ENSHBUG00000006656	-	69	30.453	ENSHBUG00000019090	ZNF319	87	30.453

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000006656	-	61	35.688	ENSAPOG00000019138	-	60	35.688	Acanthochromis_polyacanthus
ENSHBUG00000006656	-	56	34.241	ENSAPOG00000008319	-	64	34.241	Acanthochromis_polyacanthus
ENSHBUG00000006656	-	56	35.714	ENSACIG00000006826	-	59	35.714	Amphilophus_citrinellus
ENSHBUG00000006656	-	59	41.007	ENSACIG00000007464	-	52	48.864	Amphilophus_citrinellus
ENSHBUG00000006656	-	56	40.667	ENSACIG00000017892	-	86	40.667	Amphilophus_citrinellus
ENSHBUG00000006656	-	56	38.519	ENSACIG00000004641	-	59	38.519	Amphilophus_citrinellus
ENSHBUG00000006656	-	65	34.263	ENSAOCG00000014769	-	65	34.263	Amphiprion_ocellaris
ENSHBUG00000006656	-	59	36.090	ENSAOCG00000001325	-	73	34.320	Amphiprion_ocellaris
ENSHBUG00000006656	-	65	34.263	ENSAOCG00000015944	-	59	34.263	Amphiprion_ocellaris
ENSHBUG00000006656	-	60	35.907	ENSAOCG00000016897	-	65	44.262	Amphiprion_ocellaris
ENSHBUG00000006656	-	98	58.726	ENSAPEG00000010013	-	87	58.701	Amphiprion_percula
ENSHBUG00000006656	-	60	35.907	ENSAPEG00000001556	-	65	44.262	Amphiprion_percula
ENSHBUG00000006656	-	70	34.783	ENSATEG00000018931	-	89	39.073	Anabas_testudineus
ENSHBUG00000006656	-	100	100.000	ENSACLG00000005694	-	81	99.531	Astatotilapia_calliptera
ENSHBUG00000006656	-	59	45.977	ENSACLG00000011658	-	74	45.977	Astatotilapia_calliptera
ENSHBUG00000006656	-	55	38.411	ENSCING00000002128	zf(c2h2)-35	70	38.411	Ciona_intestinalis
ENSHBUG00000006656	-	55	41.071	ENSCSEG00000010264	-	90	35.075	Cynoglossus_semilaevis
ENSHBUG00000006656	-	60	39.062	ENSCSEG00000008525	-	58	37.276	Cynoglossus_semilaevis
ENSHBUG00000006656	-	58	48.750	ENSCSEG00000015593	-	77	48.750	Cynoglossus_semilaevis
ENSHBUG00000006656	-	67	44.000	ENSCSEG00000010453	-	51	44.000	Cynoglossus_semilaevis
ENSHBUG00000006656	-	56	40.860	ENSCVAG00000012682	-	64	38.739	Cyprinodon_variegatus
ENSHBUG00000006656	-	71	36.316	ENSCVAG00000003250	-	70	36.316	Cyprinodon_variegatus
ENSHBUG00000006656	-	64	41.667	ENSCVAG00000006653	-	64	41.667	Cyprinodon_variegatus
ENSHBUG00000006656	-	58	45.122	ENSCVAG00000015616	-	73	45.122	Cyprinodon_variegatus
ENSHBUG00000006656	-	72	43.210	ENSCVAG00000020141	-	82	43.210	Cyprinodon_variegatus
ENSHBUG00000006656	-	56	30.870	ENSEBUG00000011449	-	76	30.870	Eptatretus_burgeri
ENSHBUG00000006656	-	64	35.514	ENSEBUG00000002290	-	55	35.514	Eptatretus_burgeri
ENSHBUG00000006656	-	62	36.842	ENSEBUG00000007931	-	66	36.842	Eptatretus_burgeri
ENSHBUG00000006656	-	66	36.702	ENSELUG00000001909	-	90	31.977	Esox_lucius
ENSHBUG00000006656	-	67	44.898	ENSELUG00000024007	-	67	44.898	Esox_lucius
ENSHBUG00000006656	-	63	37.956	ENSGAFG00000001879	-	70	37.956	Gambusia_affinis
ENSHBUG00000006656	-	62	35.802	ENSGAFG00000008204	-	65	35.802	Gambusia_affinis
ENSHBUG00000006656	-	74	39.252	ENSGAFG00000007528	-	73	39.252	Gambusia_affinis
ENSHBUG00000006656	-	61	38.182	ENSHCOG00000013489	-	95	33.942	Hippocampus_comes
ENSHBUG00000006656	-	59	37.104	ENSHCOG00000008550	-	64	36.555	Hippocampus_comes
ENSHBUG00000006656	-	56	39.801	ENSHCOG00000015497	-	75	36.889	Hippocampus_comes
ENSHBUG00000006656	-	60	39.326	ENSHCOG00000020670	-	83	39.326	Hippocampus_comes
ENSHBUG00000006656	-	59	37.104	ENSHCOG00000001873	-	64	36.555	Hippocampus_comes
ENSHBUG00000006656	-	60	32.683	ENSKMAG00000007699	-	83	32.683	Kryptolebias_marmoratus
ENSHBUG00000006656	-	56	36.747	ENSLBEG00000007106	-	70	36.747	Labrus_bergylta
ENSHBUG00000006656	-	65	38.323	ENSLBEG00000011210	-	57	38.323	Labrus_bergylta
ENSHBUG00000006656	-	65	35.135	ENSLBEG00000001132	-	85	36.029	Labrus_bergylta
ENSHBUG00000006656	-	69	38.562	ENSLBEG00000006161	-	85	38.562	Labrus_bergylta
ENSHBUG00000006656	-	62	34.978	ENSLBEG00000017424	-	97	34.978	Labrus_bergylta
ENSHBUG00000006656	-	64	36.923	ENSLOCG00000004208	-	99	36.923	Lepisosteus_oculatus
ENSHBUG00000006656	-	64	36.782	ENSMAMG00000017939	-	94	36.782	Mastacembelus_armatus
ENSHBUG00000006656	-	56	100.000	ENSMZEG00005013907	-	80	100.000	Maylandia_zebra
ENSHBUG00000006656	-	59	39.877	ENSMALG00000004279	-	81	39.877	Monopterus_albus
ENSHBUG00000006656	-	65	32.685	ENSONIG00000007967	-	77	32.685	Oreochromis_niloticus
ENSHBUG00000006656	-	68	34.615	ENSORLG00000002268	-	98	34.615	Oryzias_latipes
ENSHBUG00000006656	-	54	31.395	ENSORLG00000028711	-	88	31.395	Oryzias_latipes
ENSHBUG00000006656	-	58	47.458	ENSORLG00000021885	-	66	40.426	Oryzias_latipes
ENSHBUG00000006656	-	66	40.828	ENSORLG00020018921	-	75	40.828	Oryzias_latipes_hni
ENSHBUG00000006656	-	59	41.791	ENSORLG00015018099	-	62	41.791	Oryzias_latipes_hsok
ENSHBUG00000006656	-	57	37.226	ENSOMEG00000005578	-	74	37.226	Oryzias_melastigma
ENSHBUG00000006656	-	56	35.443	ENSPMGG00000019750	-	90	35.443	Periophthalmus_magnuspinnatus
ENSHBUG00000006656	-	71	40.741	ENSPMGG00000007051	-	70	36.216	Periophthalmus_magnuspinnatus
ENSHBUG00000006656	-	55	42.775	ENSPMGG00000002661	-	68	42.775	Periophthalmus_magnuspinnatus
ENSHBUG00000006656	-	61	41.667	ENSPMGG00000009571	-	74	41.667	Periophthalmus_magnuspinnatus
ENSHBUG00000006656	-	60	41.379	ENSPMGG00000002455	-	95	41.379	Periophthalmus_magnuspinnatus
ENSHBUG00000006656	-	77	31.330	ENSPMGG00000006928	-	72	31.818	Periophthalmus_magnuspinnatus
ENSHBUG00000006656	-	56	42.857	ENSPMGG00000002659	-	64	42.857	Periophthalmus_magnuspinnatus
ENSHBUG00000006656	-	59	44.048	ENSPMAG00000000839	-	94	44.048	Petromyzon_marinus
ENSHBUG00000006656	-	53	33.636	ENSPMAG00000004189	-	99	32.627	Petromyzon_marinus
ENSHBUG00000006656	-	54	38.158	ENSPMAG00000002022	-	100	38.158	Petromyzon_marinus
ENSHBUG00000006656	-	62	37.895	ENSPFOG00000018860	-	100	37.895	Poecilia_formosa
ENSHBUG00000006656	-	51	38.728	ENSPFOG00000009491	-	61	30.657	Poecilia_formosa
ENSHBUG00000006656	-	66	36.364	ENSPLAG00000010067	-	71	36.364	Poecilia_latipinna
ENSHBUG00000006656	-	67	35.519	ENSPLAG00000008941	-	92	30.420	Poecilia_latipinna
ENSHBUG00000006656	-	67	30.000	ENSPLAG00000014832	-	91	30.000	Poecilia_latipinna
ENSHBUG00000006656	-	72	40.000	ENSPMEG00000024117	-	56	40.000	Poecilia_mexicana
ENSHBUG00000006656	-	67	30.769	ENSPMEG00000005210	-	91	30.769	Poecilia_mexicana
ENSHBUG00000006656	-	65	32.806	ENSPMEG00000002953	-	64	34.906	Poecilia_mexicana
ENSHBUG00000006656	-	57	35.345	ENSPREG00000009488	-	91	35.345	Poecilia_reticulata
ENSHBUG00000006656	-	59	41.860	ENSPREG00000002603	-	55	41.860	Poecilia_reticulata
ENSHBUG00000006656	-	60	41.803	ENSPNYG00000017888	-	51	41.803	Pundamilia_nyererei
ENSHBUG00000006656	-	62	34.694	ENSPNAG00000005946	-	85	34.694	Pygocentrus_nattereri
ENSHBUG00000006656	-	57	40.323	ENSSFOG00015011531	-	88	40.323	Scleropages_formosus
ENSHBUG00000006656	-	71	42.169	ENSSMAG00000004259	-	94	42.169	Scophthalmus_maximus
ENSHBUG00000006656	-	67	35.102	ENSSMAG00000008308	-	70	35.102	Scophthalmus_maximus
ENSHBUG00000006656	-	64	38.065	ENSSMAG00000013291	-	96	38.065	Scophthalmus_maximus
ENSHBUG00000006656	-	56	36.066	ENSSLDG00000014436	-	74	35.938	Seriola_lalandi_dorsalis
ENSHBUG00000006656	-	69	32.685	ENSSLDG00000011849	-	52	32.685	Seriola_lalandi_dorsalis
ENSHBUG00000006656	-	96	55.529	ENSSPAG00000011544	-	85	55.760	Stegastes_partitus
ENSHBUG00000006656	-	58	74.074	ENSSPAG00000011533	-	92	74.074	Stegastes_partitus
ENSHBUG00000006656	-	61	39.735	ENSXETG00000012506	znf91	100	38.596	Xenopus_tropicalis
ENSHBUG00000006656	-	56	41.304	ENSXCOG00000003441	-	78	32.051	Xiphophorus_couchianus
ENSHBUG00000006656	-	60	43.333	ENSXCOG00000000254	-	64	43.333	Xiphophorus_couchianus
ENSHBUG00000006656	-	56	34.109	ENSXCOG00000014360	-	54	34.109	Xiphophorus_couchianus
ENSHBUG00000006656	-	65	38.571	ENSXCOG00000020768	-	75	38.571	Xiphophorus_couchianus
ENSHBUG00000006656	-	65	33.898	ENSXMAG00000012936	-	82	33.898	Xiphophorus_maculatus