EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000006662 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 10167 bases
Position: chrJH425569.1:685030-695196
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000024952	zf-C2H2	PF00096.26	7.9e-66	1	12
ENSHBUP00000024952	zf-C2H2	PF00096.26	7.9e-66	2	12
ENSHBUP00000024952	zf-C2H2	PF00096.26	7.9e-66	3	12
ENSHBUP00000024952	zf-C2H2	PF00096.26	7.9e-66	4	12
ENSHBUP00000024952	zf-C2H2	PF00096.26	7.9e-66	5	12
ENSHBUP00000024952	zf-C2H2	PF00096.26	7.9e-66	6	12
ENSHBUP00000024952	zf-C2H2	PF00096.26	7.9e-66	7	12
ENSHBUP00000024952	zf-C2H2	PF00096.26	7.9e-66	8	12
ENSHBUP00000024952	zf-C2H2	PF00096.26	7.9e-66	9	12
ENSHBUP00000024952	zf-C2H2	PF00096.26	7.9e-66	10	12
ENSHBUP00000024952	zf-C2H2	PF00096.26	7.9e-66	11	12
ENSHBUP00000024952	zf-C2H2	PF00096.26	7.9e-66	12	12
ENSHBUP00000024952	zf-met	PF12874.7	3.9e-21	1	3
ENSHBUP00000024952	zf-met	PF12874.7	3.9e-21	2	3
ENSHBUP00000024952	zf-met	PF12874.7	3.9e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000007266	-	5701	-	ENSHBUP00000024952	693 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000006662's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000006662's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000006662	-	86	50.909	ENSHBUG00000012565	-	91	47.853
ENSHBUG00000006662	-	67	44.853	ENSHBUG00000000146	-	90	44.853
ENSHBUG00000006662	-	89	41.600	ENSHBUG00000006250	-	89	41.600
ENSHBUG00000006662	-	85	46.154	ENSHBUG00000021028	-	97	46.154
ENSHBUG00000006662	-	94	47.183	ENSHBUG00000004718	-	98	47.183
ENSHBUG00000006662	-	94	44.444	ENSHBUG00000001075	-	100	47.239
ENSHBUG00000006662	-	94	42.857	ENSHBUG00000005809	-	97	47.024
ENSHBUG00000006662	-	66	41.379	ENSHBUG00000022063	-	67	41.379
ENSHBUG00000006662	-	91	46.667	ENSHBUG00000015404	-	86	46.667
ENSHBUG00000006662	-	66	40.288	ENSHBUG00000020544	-	98	40.288
ENSHBUG00000006662	-	88	40.000	ENSHBUG00000015393	-	76	41.500
ENSHBUG00000006662	-	73	44.860	ENSHBUG00000004077	-	94	46.535
ENSHBUG00000006662	-	57	48.921	ENSHBUG00000009941	-	83	49.107
ENSHBUG00000006662	-	86	45.455	ENSHBUG00000015166	-	85	45.455
ENSHBUG00000006662	-	65	46.012	ENSHBUG00000012230	-	86	46.012
ENSHBUG00000006662	-	62	50.000	ENSHBUG00000006984	-	97	50.000
ENSHBUG00000006662	-	67	42.105	ENSHBUG00000018885	-	68	42.105
ENSHBUG00000006662	-	66	47.561	ENSHBUG00000006863	-	89	47.561
ENSHBUG00000006662	-	71	42.000	ENSHBUG00000016546	-	75	42.000
ENSHBUG00000006662	-	73	48.466	ENSHBUG00000002526	-	71	48.466
ENSHBUG00000006662	-	66	41.026	ENSHBUG00000016334	-	57	41.026
ENSHBUG00000006662	-	74	31.818	ENSHBUG00000018577	PRDM15	53	31.818
ENSHBUG00000006662	-	67	41.949	ENSHBUG00000002841	-	80	41.949
ENSHBUG00000006662	-	76	47.458	ENSHBUG00000007188	-	52	47.458
ENSHBUG00000006662	-	69	48.148	ENSHBUG00000012984	-	94	48.148
ENSHBUG00000006662	-	97	45.361	ENSHBUG00000009837	znf236	82	45.361
ENSHBUG00000006662	-	62	44.853	ENSHBUG00000017869	-	75	44.853
ENSHBUG00000006662	-	72	50.694	ENSHBUG00000015942	-	99	50.877
ENSHBUG00000006662	-	87	54.930	ENSHBUG00000017372	-	93	46.552
ENSHBUG00000006662	-	61	42.424	ENSHBUG00000016927	-	60	43.827
ENSHBUG00000006662	-	63	40.952	ENSHBUG00000007764	snai2	75	40.952
ENSHBUG00000006662	-	74	43.925	ENSHBUG00000007389	gfi1aa	56	41.071
ENSHBUG00000006662	-	69	42.690	ENSHBUG00000007316	-	78	42.690
ENSHBUG00000006662	-	87	40.690	ENSHBUG00000012432	-	81	40.690
ENSHBUG00000006662	-	87	47.514	ENSHBUG00000016384	-	93	47.514
ENSHBUG00000006662	-	67	40.244	ENSHBUG00000020527	-	90	40.244
ENSHBUG00000006662	-	66	41.509	ENSHBUG00000002320	-	62	41.509
ENSHBUG00000006662	-	91	41.935	ENSHBUG00000003057	-	94	47.205
ENSHBUG00000006662	-	65	50.617	ENSHBUG00000021906	-	72	50.617
ENSHBUG00000006662	-	61	45.614	ENSHBUG00000009274	-	84	45.614
ENSHBUG00000006662	-	61	41.071	ENSHBUG00000011969	gfi1ab	52	41.085
ENSHBUG00000006662	-	89	36.782	ENSHBUG00000000731	-	57	43.925
ENSHBUG00000006662	-	60	47.531	ENSHBUG00000022073	-	67	47.531
ENSHBUG00000006662	-	75	45.732	ENSHBUG00000004217	-	64	45.732
ENSHBUG00000006662	-	60	45.985	ENSHBUG00000011194	-	83	45.985
ENSHBUG00000006662	-	68	46.429	ENSHBUG00000013292	-	75	46.429
ENSHBUG00000006662	-	86	40.541	ENSHBUG00000013296	-	98	46.154
ENSHBUG00000006662	-	59	52.055	ENSHBUG00000003529	-	84	52.055
ENSHBUG00000006662	-	73	38.961	ENSHBUG00000017445	zbtb41	57	38.961
ENSHBUG00000006662	-	92	37.500	ENSHBUG00000014725	-	90	44.970
ENSHBUG00000006662	-	67	49.660	ENSHBUG00000002541	-	79	49.660
ENSHBUG00000006662	-	66	41.964	ENSHBUG00000023375	prdm5	82	41.964
ENSHBUG00000006662	-	89	42.143	ENSHBUG00000019090	ZNF319	89	42.143
ENSHBUG00000006662	-	87	42.857	ENSHBUG00000012828	znf341	57	42.857
ENSHBUG00000006662	-	86	45.149	ENSHBUG00000012758	-	89	46.245
ENSHBUG00000006662	-	87	42.143	ENSHBUG00000009815	znf319b	89	42.143
ENSHBUG00000006662	-	89	42.331	ENSHBUG00000003449	-	91	42.331
ENSHBUG00000006662	-	65	49.462	ENSHBUG00000017843	-	56	49.462
ENSHBUG00000006662	-	89	50.000	ENSHBUG00000017542	znf526	62	50.000
ENSHBUG00000006662	-	75	45.000	ENSHBUG00000002307	-	69	45.000
ENSHBUG00000006662	-	66	35.751	ENSHBUG00000009720	-	67	35.606
ENSHBUG00000006662	-	58	35.644	ENSHBUG00000012492	scrt2	51	35.644
ENSHBUG00000006662	-	73	43.165	ENSHBUG00000005848	-	96	43.165
ENSHBUG00000006662	-	60	38.462	ENSHBUG00000016621	scrt1b	52	38.824
ENSHBUG00000006662	-	83	40.909	ENSHBUG00000005451	gfi1b	57	40.909
ENSHBUG00000006662	-	90	46.584	ENSHBUG00000013542	-	85	46.584
ENSHBUG00000006662	-	61	42.727	ENSHBUG00000017251	-	100	42.727
ENSHBUG00000006662	-	67	41.117	ENSHBUG00000011944	-	70	41.117
ENSHBUG00000006662	-	61	46.626	ENSHBUG00000000099	-	89	46.626
ENSHBUG00000006662	-	62	35.270	ENSHBUG00000006656	-	57	35.632
ENSHBUG00000006662	-	98	38.579	ENSHBUG00000013490	-	75	46.012
ENSHBUG00000006662	-	64	41.722	ENSHBUG00000006238	-	93	41.722
ENSHBUG00000006662	-	76	43.558	ENSHBUG00000013467	-	56	43.558
ENSHBUG00000006662	-	64	44.720	ENSHBUG00000020071	-	57	44.720
ENSHBUG00000006662	-	66	50.303	ENSHBUG00000002393	-	54	44.304
ENSHBUG00000006662	-	89	39.362	ENSHBUG00000002961	-	97	41.916
ENSHBUG00000006662	-	61	49.080	ENSHBUG00000002889	-	67	49.080
ENSHBUG00000006662	-	68	42.222	ENSHBUG00000002881	-	59	44.512
ENSHBUG00000006662	-	91	47.826	ENSHBUG00000015803	-	95	45.745
ENSHBUG00000006662	-	65	48.227	ENSHBUG00000013065	-	78	48.227
ENSHBUG00000006662	-	92	41.401	ENSHBUG00000021970	-	83	44.086
ENSHBUG00000006662	-	74	40.476	ENSHBUG00000005726	-	65	37.864
ENSHBUG00000006662	-	76	48.800	ENSHBUG00000019377	-	76	48.800
ENSHBUG00000006662	-	76	44.172	ENSHBUG00000013518	-	99	44.172
ENSHBUG00000006662	-	71	39.496	ENSHBUG00000009953	-	64	42.553
ENSHBUG00000006662	-	67	49.000	ENSHBUG00000017864	-	89	49.000
ENSHBUG00000006662	-	65	41.964	ENSHBUG00000013491	snai1a	57	39.286
ENSHBUG00000006662	-	69	47.407	ENSHBUG00000007068	-	58	47.407
ENSHBUG00000006662	-	78	43.030	ENSHBUG00000003165	-	67	45.926
ENSHBUG00000006662	-	72	45.399	ENSHBUG00000011725	-	79	45.399
ENSHBUG00000006662	-	90	41.040	ENSHBUG00000015719	-	98	41.040
ENSHBUG00000006662	-	71	47.059	ENSHBUG00000021003	-	100	44.444
ENSHBUG00000006662	-	66	39.462	ENSHBUG00000008502	-	82	39.462
ENSHBUG00000006662	-	81	43.636	ENSHBUG00000012007	-	91	43.636
ENSHBUG00000006662	-	62	46.154	ENSHBUG00000000820	-	93	46.154
ENSHBUG00000006662	-	76	46.460	ENSHBUG00000002533	-	63	46.460
ENSHBUG00000006662	-	64	47.239	ENSHBUG00000002530	-	62	47.239
ENSHBUG00000006662	-	69	50.365	ENSHBUG00000019800	-	99	50.365
ENSHBUG00000006662	-	62	44.928	ENSHBUG00000017924	-	56	44.928
ENSHBUG00000006662	-	65	36.634	ENSHBUG00000019101	-	59	36.634
ENSHBUG00000006662	-	73	44.156	ENSHBUG00000000636	-	65	44.156
ENSHBUG00000006662	-	89	42.331	ENSHBUG00000013264	-	87	42.331
ENSHBUG00000006662	-	63	43.229	ENSHBUG00000013194	-	82	43.678
ENSHBUG00000006662	-	94	37.931	ENSHBUG00000004840	znf646	88	37.302
ENSHBUG00000006662	-	65	44.186	ENSHBUG00000002878	-	61	44.186
ENSHBUG00000006662	-	62	45.133	ENSHBUG00000023209	-	95	45.133
ENSHBUG00000006662	-	88	49.080	ENSHBUG00000012215	-	95	49.080
ENSHBUG00000006662	-	66	52.778	ENSHBUG00000018916	-	62	47.794
ENSHBUG00000006662	-	87	44.000	ENSHBUG00000013093	si:dkey-89b17.4	62	44.000
ENSHBUG00000006662	-	66	42.331	ENSHBUG00000014494	-	77	42.331
ENSHBUG00000006662	-	68	48.466	ENSHBUG00000023077	-	50	48.466

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000006662	-	99	86.167	ENSAPOG00000002213	-	99	91.192	Acanthochromis_polyacanthus
ENSHBUG00000006662	-	72	95.439	ENSACIG00000013163	-	85	96.043	Amphilophus_citrinellus
ENSHBUG00000006662	-	71	44.660	ENSACIG00000013149	-	86	44.218	Amphilophus_citrinellus
ENSHBUG00000006662	-	99	86.187	ENSAOCG00000013124	-	100	86.187	Amphiprion_ocellaris
ENSHBUG00000006662	-	99	86.599	ENSAPEG00000009997	-	100	86.599	Amphiprion_percula
ENSHBUG00000006662	-	95	87.597	ENSATEG00000004127	-	99	94.981	Anabas_testudineus
ENSHBUG00000006662	-	100	99.856	ENSACLG00000005708	-	100	99.856	Astatotilapia_calliptera
ENSHBUG00000006662	-	88	66.765	ENSCVAG00000014734	-	96	79.762	Cyprinodon_variegatus
ENSHBUG00000006662	-	64	40.606	FBgn0003567	su(Hw)	51	40.606	Drosophila_melanogaster
ENSHBUG00000006662	-	64	83.333	ENSFHEG00000014060	-	72	83.333	Fundulus_heteroclitus
ENSHBUG00000006662	-	87	72.524	ENSGMOG00000017526	-	97	72.524	Gadus_morhua
ENSHBUG00000006662	-	99	76.395	ENSGAFG00000011174	-	100	76.074	Gambusia_affinis
ENSHBUG00000006662	-	92	95.021	ENSGACG00000019550	-	86	95.021	Gasterosteus_aculeatus
ENSHBUG00000006662	-	68	85.818	ENSHCOG00000003041	-	96	85.818	Hippocampus_comes
ENSHBUG00000006662	-	99	79.654	ENSKMAG00000009979	-	99	79.365	Kryptolebias_marmoratus
ENSHBUG00000006662	-	99	81.322	ENSLBEG00000010165	-	98	92.704	Labrus_bergylta
ENSHBUG00000006662	-	95	89.091	ENSMAMG00000006312	-	100	92.000	Mastacembelus_armatus
ENSHBUG00000006662	-	100	99.856	ENSMZEG00005013913	-	100	99.856	Maylandia_zebra
ENSHBUG00000006662	-	89	95.167	ENSMMOG00000011282	-	92	95.703	Mola_mola
ENSHBUG00000006662	-	99	83.022	ENSMALG00000000494	-	100	82.665	Monopterus_albus
ENSHBUG00000006662	-	76	83.830	ENSNBRG00000007602	-	98	83.830	Neolamprologus_brichardi
ENSHBUG00000006662	-	88	56.458	ENSONIG00000003856	-	100	56.777	Oreochromis_niloticus
ENSHBUG00000006662	-	99	77.089	ENSORLG00000010117	-	100	77.089	Oryzias_latipes
ENSHBUG00000006662	-	99	76.879	ENSORLG00020000219	-	100	76.879	Oryzias_latipes_hni
ENSHBUG00000006662	-	86	93.056	ENSORLG00015000258	-	98	93.056	Oryzias_latipes_hsok
ENSHBUG00000006662	-	99	76.590	ENSOMEG00000018262	-	96	87.857	Oryzias_melastigma
ENSHBUG00000006662	-	91	86.316	ENSPFOG00000013455	-	100	54.444	Poecilia_formosa
ENSHBUG00000006662	-	96	77.302	ENSPLAG00000004027	-	88	87.065	Poecilia_latipinna
ENSHBUG00000006662	-	99	77.345	ENSPMEG00000007589	-	100	76.912	Poecilia_mexicana
ENSHBUG00000006662	-	87	96.935	ENSPREG00000000153	-	90	96.935	Poecilia_reticulata
ENSHBUG00000006662	-	98	99.494	ENSPNYG00000007814	-	100	99.494	Pundamilia_nyererei
ENSHBUG00000006662	-	89	40.541	ENSPNYG00000007781	-	96	42.857	Pundamilia_nyererei
ENSHBUG00000006662	-	93	96.000	ENSSMAG00000021251	-	99	93.165	Scophthalmus_maximus
ENSHBUG00000006662	-	99	84.104	ENSSDUG00000013904	-	99	84.104	Seriola_dumerili
ENSHBUG00000006662	-	94	93.836	ENSSLDG00000006994	-	97	93.836	Seriola_lalandi_dorsalis
ENSHBUG00000006662	-	99	85.591	ENSSPAG00000011524	-	100	85.159	Stegastes_partitus
ENSHBUG00000006662	-	95	88.350	ENSTRUG00000015687	-	99	93.750	Takifugu_rubripes
ENSHBUG00000006662	-	86	92.278	ENSTNIG00000008242	-	100	92.278	Tetraodon_nigroviridis
ENSHBUG00000006662	-	89	85.866	ENSXCOG00000015947	-	98	93.130	Xiphophorus_couchianus
ENSHBUG00000006662	-	99	77.522	ENSXMAG00000023291	-	96	93.701	Xiphophorus_maculatus