EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000006683 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 2432 bases
Position: chrJH425587.1:716424-718855
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000005272	RRM_1	PF00076.22	2.6e-26	1	3
ENSHBUP00000005272	RRM_1	PF00076.22	2.6e-26	2	3
ENSHBUP00000005272	RRM_1	PF00076.22	2.6e-26	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000007273	-	1062	-	ENSHBUP00000005272	353 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000006683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000006683's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000006683	-	91	37.398	ENSHBUG00000006869	ncl	55	37.113

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000006683	-	98	64.972	ENSACIG00000021941	-	95	63.043	Amphilophus_citrinellus
ENSHBUG00000006683	-	100	97.465	ENSACLG00000009613	-	100	97.465	Astatotilapia_calliptera
ENSHBUG00000006683	-	98	44.363	ENSCSEG00000017388	-	77	42.038	Cynoglossus_semilaevis
ENSHBUG00000006683	-	97	47.073	ENSFHEG00000017265	-	88	47.073	Fundulus_heteroclitus
ENSHBUG00000006683	-	92	39.674	ENSGMOG00000017831	-	97	40.489	Gadus_morhua
ENSHBUG00000006683	-	96	43.457	ENSGAFG00000018408	-	83	43.457	Gambusia_affinis
ENSHBUG00000006683	-	92	42.597	ENSHCOG00000020361	-	90	42.597	Hippocampus_comes
ENSHBUG00000006683	-	94	49.872	ENSKMAG00000003154	-	84	49.872	Kryptolebias_marmoratus
ENSHBUG00000006683	-	100	98.867	ENSMZEG00005005300	-	100	98.867	Maylandia_zebra
ENSHBUG00000006683	-	93	51.081	ENSMMOG00000018095	-	89	51.087	Mola_mola
ENSHBUG00000006683	-	91	53.571	ENSMALG00000006207	-	71	52.557	Monopterus_albus
ENSHBUG00000006683	-	95	42.896	ENSPMGG00000013705	-	93	44.536	Periophthalmus_magnuspinnatus
ENSHBUG00000006683	-	91	48.493	ENSPFOG00000016767	-	85	47.849	Poecilia_formosa
ENSHBUG00000006683	-	93	45.153	ENSPLAG00000000597	-	79	45.153	Poecilia_latipinna
ENSHBUG00000006683	-	93	44.643	ENSPMEG00000004046	-	80	44.643	Poecilia_mexicana
ENSHBUG00000006683	-	92	45.876	ENSPREG00000007170	-	82	45.663	Poecilia_reticulata
ENSHBUG00000006683	-	100	94.795	ENSPNYG00000000391	-	100	94.795	Pundamilia_nyererei
ENSHBUG00000006683	-	91	46.174	ENSTRUG00000023880	-	78	46.174	Takifugu_rubripes
ENSHBUG00000006683	-	93	44.757	ENSXMAG00000004403	-	80	44.757	Xiphophorus_maculatus