EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000006779 (Gene tree)
Gene ID: 102313564
Gene Symbol: -
Alias: -
Full Name: interferon-induced GTP-binding protein Mx-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 9642 bases
Position: chrJH426838.1:423-10064
Accession: 102313564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000023607	MMR_HSR1	PF01926.23	4.4e-05	1	1
ENSHBUP00000024068	MMR_HSR1	PF01926.23	6.1e-05	1	1
ENSHBUP00000023339	MMR_HSR1	PF01926.23	6.7e-05	1	1
ENSHBUP00000003179	MMR_HSR1	PF01926.23	7.5e-05	1	1
ENSHBUP00000003808	MMR_HSR1	PF01926.23	7.7e-05	1	1
ENSHBUP00000003825	MMR_HSR1	PF01926.23	8.5e-05	1	1
ENSHBUP00000023398	MMR_HSR1	PF01926.23	0.00021	1	1
ENSHBUP00000003510	MMR_HSR1	PF01926.23	0.00026	1	1
ENSHBUP00000024838	MMR_HSR1	PF01926.23	0.00026	1	1
ENSHBUP00000005128	MMR_HSR1	PF01926.23	0.00026	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000010832	-	1770	-	ENSHBUP00000003179	589 (aa)	-	-
ENSHBUT00000010265	-	1860	-	ENSHBUP00000003510	619 (aa)	-	-
ENSHBUT00000010693	-	1791	XM_005952243	ENSHBUP00000023607	596 (aa)	XP_005952305	-
ENSHBUT00000009492	-	2034	-	ENSHBUP00000024068	677 (aa)	-	-
ENSHBUT00000007504	-	1914	-	ENSHBUP00000024838	637 (aa)	-	-
ENSHBUT00000009726	-	1740	-	ENSHBUP00000003825	579 (aa)	-	-
ENSHBUT00000007524	-	1878	-	ENSHBUP00000005128	625 (aa)	-	-
ENSHBUT00000011363	-	1752	-	ENSHBUP00000023339	583 (aa)	-	-
ENSHBUT00000011241	-	1761	-	ENSHBUP00000023398	586 (aa)	-	-
ENSHBUT00000009753	-	1893	-	ENSHBUP00000003808	630 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000006779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000006779's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000006779	-	78	33.333	ENSHBUG00000001952	dnm1l	66	33.747
ENSHBUG00000006779	-	99	30.046	ENSHBUG00000004929	-	99	30.046
ENSHBUG00000006779	-	99	67.703	ENSHBUG00000011119	-	97	68.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000006779	-	100	69.414	ENSAPOG00000009473	mxb	98	69.134	Acanthochromis_polyacanthus
ENSHBUG00000006779	-	100	86.765	ENSACIG00000007486	mxa	99	87.719	Amphilophus_citrinellus
ENSHBUG00000006779	-	100	70.175	ENSAOCG00000000359	mxb	93	69.731	Amphiprion_ocellaris
ENSHBUG00000006779	-	100	68.599	ENSAPEG00000001712	mxb	98	68.051	Amphiprion_percula
ENSHBUG00000006779	-	99	50.164	ENSDARG00000024789	mxc	98	48.644	Danio_rerio
ENSHBUG00000006779	-	99	51.797	ENSDARG00000014427	mxe	99	51.270	Danio_rerio
ENSHBUG00000006779	-	100	71.967	ENSFHEG00000004383	mxb	98	71.967	Fundulus_heteroclitus
ENSHBUG00000006779	-	99	47.910	ENSGALG00000016142	MX1	92	47.910	Gallus_gallus
ENSHBUG00000006779	-	99	58.871	ENSIPUG00000003930	-	99	58.710	Ictalurus_punctatus
ENSHBUG00000006779	-	99	60.161	ENSIPUG00000002022	-	99	60.161	Ictalurus_punctatus
ENSHBUG00000006779	-	97	82.266	ENSLBEG00000025587	mxa	99	81.803	Labrus_bergylta
ENSHBUG00000006779	-	100	65.016	ENSMAMG00000019747	-	97	65.016	Mastacembelus_armatus
ENSHBUG00000006779	-	99	98.392	ENSMZEG00005012013	-	99	98.392	Maylandia_zebra
ENSHBUG00000006779	-	99	48.878	ENSMGAG00000014565	-	88	48.878	Meleagris_gallopavo
ENSHBUG00000006779	-	99	94.762	ENSNBRG00000020639	-	99	94.921	Neolamprologus_brichardi
ENSHBUG00000006779	-	99	75.884	ENSPMGG00000001118	mxa	100	75.200	Periophthalmus_magnuspinnatus
ENSHBUG00000006779	-	99	70.016	ENSPREG00000019545	-	98	70.016	Poecilia_reticulata
ENSHBUG00000006779	-	100	70.353	ENSSPAG00000001106	mxb	98	69.904	Stegastes_partitus