EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000006823 (Gene tree)
Gene ID: 102306621
Gene Symbol: -
Alias: RAB5CL|RABL
Full Name: ras-related protein Rab-5C-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 7545 bases
Position: chrJH426395.1:24638-32182
Accession: 102306621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000005427	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000007023	-	2485	XM_005951470	ENSHBUP00000005427	222 (aa)	XP_005951532	UPI00032A020F

Gene Model

Click here to download ENSHBUG00000006823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000006823's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000006823	-	74	36.145	ENSHBUG00000013570	-	77	36.585
ENSHBUG00000006823	-	72	34.756	ENSHBUG00000014023	si:dkey-13a21.4	79	34.756
ENSHBUG00000006823	-	75	40.719	ENSHBUG00000019261	si:dkey-16l2.16	79	40.719
ENSHBUG00000006823	-	60	30.282	ENSHBUG00000014610	arl8bb	73	30.282
ENSHBUG00000006823	-	73	36.585	ENSHBUG00000015126	rab42a	62	36.585
ENSHBUG00000006823	-	74	47.337	ENSHBUG00000003876	rab25a	80	47.337
ENSHBUG00000006823	-	88	40.816	ENSHBUG00000009320	rab25b	97	40.206
ENSHBUG00000006823	-	73	33.533	ENSHBUG00000012594	RAB29	80	33.533
ENSHBUG00000006823	-	80	42.541	ENSHBUG00000002397	-	85	42.541
ENSHBUG00000006823	-	74	42.941	ENSHBUG00000009014	-	82	42.941
ENSHBUG00000006823	-	74	34.682	ENSHBUG00000022669	rab9a	84	34.682
ENSHBUG00000006823	-	63	35.714	ENSHBUG00000007966	rab23	74	36.842
ENSHBUG00000006823	-	65	35.099	ENSHBUG00000001714	-	68	33.333
ENSHBUG00000006823	-	91	41.872	ENSHBUG00000003696	rab18b	95	41.872
ENSHBUG00000006823	-	73	50.920	ENSHBUG00000001462	RAB17	71	50.920
ENSHBUG00000006823	-	84	32.292	ENSHBUG00000010964	rabl2	83	32.292
ENSHBUG00000006823	-	88	39.487	ENSHBUG00000003728	-	95	39.487
ENSHBUG00000006823	-	73	47.239	ENSHBUG00000009947	-	75	47.239
ENSHBUG00000006823	-	53	30.328	ENSHBUG00000000964	arl8a	61	30.328
ENSHBUG00000006823	-	73	47.239	ENSHBUG00000014777	rab11bb	75	47.239
ENSHBUG00000006823	-	69	38.312	ENSHBUG00000017620	-	73	38.312
ENSHBUG00000006823	-	73	39.752	ENSHBUG00000017297	rab15	76	39.752
ENSHBUG00000006823	-	73	42.593	ENSHBUG00000003230	rab6bb	81	42.593
ENSHBUG00000006823	-	77	42.353	ENSHBUG00000006056	-	83	41.011
ENSHBUG00000006823	-	90	40.000	ENSHBUG00000000890	rab6a	96	39.801
ENSHBUG00000006823	-	76	43.103	ENSHBUG00000009027	-	82	43.103
ENSHBUG00000006823	-	53	30.328	ENSHBUG00000002201	arl8ba	62	30.328
ENSHBUG00000006823	-	89	49.239	ENSHBUG00000003434	rab22a	78	49.239
ENSHBUG00000006823	-	75	44.311	ENSHBUG00000000993	rab30	76	44.311
ENSHBUG00000006823	-	65	32.877	ENSHBUG00000011397	si:cabz01085950.1	72	32.877
ENSHBUG00000006823	-	75	39.181	ENSHBUG00000007827	zgc:101559	73	39.181
ENSHBUG00000006823	-	75	38.462	ENSHBUG00000013162	rab33ba	87	38.462
ENSHBUG00000006823	-	92	39.512	ENSHBUG00000012905	rab6ba	99	39.512
ENSHBUG00000006823	-	71	33.540	ENSHBUG00000016064	rab34a	60	33.540
ENSHBUG00000006823	-	89	32.512	ENSHBUG00000013010	rab32b	92	32.512
ENSHBUG00000006823	-	74	32.121	ENSHBUG00000013197	kras	90	30.994
ENSHBUG00000006823	-	99	82.648	ENSHBUG00000003752	rab5aa	96	83.412
ENSHBUG00000006823	-	74	42.941	ENSHBUG00000010852	RAB7A	82	42.941
ENSHBUG00000006823	-	100	86.937	ENSHBUG00000002014	rab5c	96	88.208
ENSHBUG00000006823	-	50	32.143	ENSHBUG00000015310	RAP2B	94	33.600
ENSHBUG00000006823	-	90	41.951	ENSHBUG00000009333	rab11al	95	41.951
ENSHBUG00000006823	-	72	30.000	ENSHBUG00000018763	rras	81	30.000
ENSHBUG00000006823	-	88	43.878	ENSHBUG00000010304	rab1ab	96	43.878
ENSHBUG00000006823	-	78	31.285	ENSHBUG00000011998	hrasb	94	31.285
ENSHBUG00000006823	-	83	35.052	ENSHBUG00000001595	rab9b	84	35.263
ENSHBUG00000006823	-	76	42.262	ENSHBUG00000019164	rab2a	79	42.262
ENSHBUG00000006823	-	79	42.308	ENSHBUG00000001518	rab18a	89	42.308
ENSHBUG00000006823	-	75	38.372	ENSHBUG00000008497	rab12	71	38.372
ENSHBUG00000006823	-	74	46.951	ENSHBUG00000023035	rab11a	72	46.386
ENSHBUG00000006823	-	88	37.755	ENSHBUG00000001416	rab35b	96	37.755
ENSHBUG00000006823	-	85	39.153	ENSHBUG00000022562	-	87	39.153
ENSHBUG00000006823	-	74	37.349	ENSHBUG00000003539	RAB39B	78	37.349
ENSHBUG00000006823	-	69	32.468	ENSHBUG00000007788	rheb	83	32.468
ENSHBUG00000006823	-	92	37.561	ENSHBUG00000014338	RAB41	82	43.023

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000006823	-	99	88.584	ENSG00000108774	RAB5C	95	95.763	Homo_sapiens
ENSHBUG00000006823	-	99	89.140	ENSAPOG00000016864	rab5c	95	90.521	Acanthochromis_polyacanthus
ENSHBUG00000006823	-	99	88.584	ENSAMEG00000006003	RAB5C	96	89.100	Ailuropoda_melanoleuca
ENSHBUG00000006823	-	100	87.838	ENSACIG00000010896	rab5c	98	88.732	Amphilophus_citrinellus
ENSHBUG00000006823	-	99	89.140	ENSAOCG00000016614	rab5c	95	90.521	Amphiprion_ocellaris
ENSHBUG00000006823	-	96	89.720	ENSAPEG00000017868	-	96	90.521	Amphiprion_percula
ENSHBUG00000006823	-	99	89.091	ENSATEG00000001937	rab5c	96	90.476	Anabas_testudineus
ENSHBUG00000006823	-	93	90.821	ENSANAG00000025390	RAB5C	97	91.457	Aotus_nancymaae
ENSHBUG00000006823	-	100	100.000	ENSACLG00000008615	-	100	100.000	Astatotilapia_calliptera
ENSHBUG00000006823	-	100	86.937	ENSACLG00000002706	rab5c	96	88.208	Astatotilapia_calliptera
ENSHBUG00000006823	-	100	88.789	ENSAMXG00000043717	rab5c	96	90.141	Astyanax_mexicanus
ENSHBUG00000006823	-	95	89.100	ENSAMXG00000037267	-	99	89.100	Astyanax_mexicanus
ENSHBUG00000006823	-	99	88.584	ENSBTAG00000006982	RAB5C	96	89.100	Bos_taurus
ENSHBUG00000006823	-	99	74.439	WBGene00004268	rab-5	95	75.587	Caenorhabditis_elegans
ENSHBUG00000006823	-	99	88.128	ENSCAFG00000015629	RAB5C	96	88.626	Canis_familiaris
ENSHBUG00000006823	-	99	88.128	ENSCAFG00020013537	RAB5C	96	88.626	Canis_lupus_dingo
ENSHBUG00000006823	-	99	88.584	ENSCHIG00000012960	RAB5C	96	89.100	Capra_hircus
ENSHBUG00000006823	-	99	89.041	ENSTSYG00000030531	RAB5C	96	89.573	Carlito_syrichta
ENSHBUG00000006823	-	99	88.584	ENSCCAG00000025940	RAB5C	96	89.100	Cebus_capucinus
ENSHBUG00000006823	-	99	88.584	ENSCATG00000040873	RAB5C	96	89.100	Cercocebus_atys
ENSHBUG00000006823	-	99	87.215	ENSCLAG00000016650	RAB5C	95	88.517	Chinchilla_lanigera
ENSHBUG00000006823	-	81	94.444	ENSCHOG00000009886	RAB5C	97	95.930	Choloepus_hoffmanni
ENSHBUG00000006823	-	97	75.814	ENSCING00000003340	-	97	75.701	Ciona_intestinalis
ENSHBUG00000006823	-	95	76.037	ENSCSAVG00000000613	-	94	84.416	Ciona_savignyi
ENSHBUG00000006823	-	99	88.584	ENSCGRG00001014226	Rab5c	96	89.100	Cricetulus_griseus_chok1gshd
ENSHBUG00000006823	-	99	88.584	ENSCGRG00000007534	Rab5c	96	89.100	Cricetulus_griseus_crigri
ENSHBUG00000006823	-	100	88.288	ENSCSEG00000017024	rab5c	96	89.623	Cynoglossus_semilaevis
ENSHBUG00000006823	-	100	89.640	ENSCVAG00000009550	rab5c	96	91.038	Cyprinodon_variegatus
ENSHBUG00000006823	-	99	89.041	ENSDNOG00000038853	RAB5C	96	89.573	Dasypus_novemcinctus
ENSHBUG00000006823	-	99	89.041	ENSDORG00000006819	Rab5c	95	90.431	Dipodomys_ordii
ENSHBUG00000006823	-	97	72.146	FBgn0014010	Rab5	93	72.558	Drosophila_melanogaster
ENSHBUG00000006823	-	96	76.995	ENSEBUG00000014794	rab5c	96	77.512	Eptatretus_burgeri
ENSHBUG00000006823	-	99	88.584	ENSEASG00005009281	RAB5C	96	89.100	Equus_asinus_asinus
ENSHBUG00000006823	-	99	89.041	ENSECAG00000025054	RAB5C	96	89.573	Equus_caballus
ENSHBUG00000006823	-	99	88.584	ENSEEUG00000002790	RAB5C	96	89.100	Erinaceus_europaeus
ENSHBUG00000006823	-	100	86.036	ENSELUG00000010439	-	96	87.264	Esox_lucius
ENSHBUG00000006823	-	99	88.128	ENSELUG00000018516	rab5c	96	89.474	Esox_lucius
ENSHBUG00000006823	-	99	88.584	ENSFCAG00000002148	RAB5C	96	89.100	Felis_catus
ENSHBUG00000006823	-	99	86.758	ENSFDAG00000021541	RAB5C	96	87.204	Fukomys_damarensis
ENSHBUG00000006823	-	100	89.189	ENSFHEG00000012117	rab5c	96	90.566	Fundulus_heteroclitus
ENSHBUG00000006823	-	100	92.342	ENSFHEG00000015268	-	97	92.523	Fundulus_heteroclitus
ENSHBUG00000006823	-	76	87.574	ENSGMOG00000001876	-	98	87.574	Gadus_morhua
ENSHBUG00000006823	-	100	87.838	ENSGMOG00000015096	rab5c	96	89.151	Gadus_morhua
ENSHBUG00000006823	-	100	88.288	ENSGAFG00000000884	rab5c	96	89.623	Gambusia_affinis
ENSHBUG00000006823	-	95	94.286	ENSGAFG00000003642	-	97	91.204	Gambusia_affinis
ENSHBUG00000006823	-	99	85.455	ENSGACG00000008659	rab5c	95	86.667	Gasterosteus_aculeatus
ENSHBUG00000006823	-	99	88.584	ENSGGOG00000005472	RAB5C	96	89.100	Gorilla_gorilla
ENSHBUG00000006823	-	99	87.671	ENSHGLG00000012067	RAB5C	96	88.152	Heterocephalus_glaber_female
ENSHBUG00000006823	-	100	89.686	ENSHCOG00000004662	rab5c	95	91.080	Hippocampus_comes
ENSHBUG00000006823	-	99	85.455	ENSHCOG00000020238	-	99	84.545	Hippocampus_comes
ENSHBUG00000006823	-	96	85.981	ENSIPUG00000020082	rab5c	99	85.981	Ictalurus_punctatus
ENSHBUG00000006823	-	99	88.584	ENSSTOG00000006620	RAB5C	96	89.100	Ictidomys_tridecemlineatus
ENSHBUG00000006823	-	99	89.498	ENSJJAG00000021181	Rab5c	96	90.047	Jaculus_jaculus
ENSHBUG00000006823	-	100	92.342	ENSKMAG00000017417	-	96	92.958	Kryptolebias_marmoratus
ENSHBUG00000006823	-	100	88.288	ENSKMAG00000020038	rab5c	96	89.623	Kryptolebias_marmoratus
ENSHBUG00000006823	-	100	88.739	ENSLBEG00000004128	rab5c	96	90.094	Labrus_bergylta
ENSHBUG00000006823	-	100	90.991	ENSLBEG00000010408	-	95	91.943	Labrus_bergylta
ENSHBUG00000006823	-	99	87.671	ENSLOCG00000012566	rab5c	96	88.995	Lepisosteus_oculatus
ENSHBUG00000006823	-	99	88.584	ENSMFAG00000039627	RAB5C	97	89.100	Macaca_fascicularis
ENSHBUG00000006823	-	99	88.584	ENSMNEG00000000355	RAB5C	96	89.100	Macaca_nemestrina
ENSHBUG00000006823	-	100	91.441	ENSMAMG00000016207	-	96	91.981	Mastacembelus_armatus
ENSHBUG00000006823	-	100	87.387	ENSMAMG00000022322	rab5c	96	89.623	Mastacembelus_armatus
ENSHBUG00000006823	-	100	86.937	ENSMZEG00005022735	rab5c	96	88.208	Maylandia_zebra
ENSHBUG00000006823	-	100	100.000	ENSMZEG00005021090	-	100	100.000	Maylandia_zebra
ENSHBUG00000006823	-	99	89.041	ENSMAUG00000015005	Rab5c	96	89.573	Mesocricetus_auratus
ENSHBUG00000006823	-	99	89.041	ENSMICG00000041608	RAB5C	96	89.573	Microcebus_murinus
ENSHBUG00000006823	-	99	88.584	ENSMOCG00000018531	-	96	89.100	Microtus_ochrogaster
ENSHBUG00000006823	-	99	89.091	ENSMMOG00000020621	rab5c	95	90.476	Mola_mola
ENSHBUG00000006823	-	97	82.326	ENSMALG00000006052	rab5c	96	83.019	Monopterus_albus
ENSHBUG00000006823	-	100	90.541	ENSMALG00000022348	-	96	91.509	Monopterus_albus
ENSHBUG00000006823	-	99	89.498	MGP_CAROLIEiJ_G0017184	Rab5c	96	90.047	Mus_caroli
ENSHBUG00000006823	-	99	89.498	ENSMUSG00000019173	Rab5c	96	90.047	Mus_musculus
ENSHBUG00000006823	-	99	89.498	MGP_PahariEiJ_G0018314	Rab5c	96	90.047	Mus_pahari
ENSHBUG00000006823	-	99	89.498	MGP_SPRETEiJ_G0018027	Rab5c	96	90.047	Mus_spretus
ENSHBUG00000006823	-	99	88.584	ENSMPUG00000010554	RAB5C	96	89.100	Mustela_putorius_furo
ENSHBUG00000006823	-	99	87.671	ENSNGAG00000010286	Rab5c	95	88.995	Nannospalax_galili
ENSHBUG00000006823	-	100	100.000	ENSNBRG00000016922	-	100	100.000	Neolamprologus_brichardi
ENSHBUG00000006823	-	100	87.838	ENSNBRG00000018165	rab5c	96	89.151	Neolamprologus_brichardi
ENSHBUG00000006823	-	81	87.778	ENSOPRG00000008255	RAB5C	97	88.372	Ochotona_princeps
ENSHBUG00000006823	-	99	86.758	ENSODEG00000017920	RAB5C	95	88.038	Octodon_degus
ENSHBUG00000006823	-	100	88.288	ENSONIG00000001113	rab5c	96	89.623	Oreochromis_niloticus
ENSHBUG00000006823	-	99	87.727	ENSORLG00000003882	rab5c	96	89.048	Oryzias_latipes
ENSHBUG00000006823	-	99	87.727	ENSORLG00020008388	rab5c	96	89.048	Oryzias_latipes_hni
ENSHBUG00000006823	-	99	87.727	ENSORLG00015021900	rab5c	96	89.048	Oryzias_latipes_hsok
ENSHBUG00000006823	-	99	87.727	ENSOMEG00000023078	rab5c	96	89.048	Oryzias_melastigma
ENSHBUG00000006823	-	99	88.584	ENSOGAG00000009456	RAB5C	95	89.952	Otolemur_garnettii
ENSHBUG00000006823	-	99	88.584	ENSOARG00000018768	RAB5C	96	89.100	Ovis_aries
ENSHBUG00000006823	-	99	88.584	ENSPPAG00000037206	RAB5C	96	89.100	Pan_paniscus
ENSHBUG00000006823	-	99	88.584	ENSPPRG00000005745	RAB5C	96	89.100	Panthera_pardus
ENSHBUG00000006823	-	99	88.584	ENSPTIG00000008177	RAB5C	96	89.100	Panthera_tigris_altaica
ENSHBUG00000006823	-	99	88.584	ENSPTRG00000009194	RAB5C	97	89.100	Pan_troglodytes
ENSHBUG00000006823	-	99	86.301	ENSPKIG00000001237	-	96	88.038	Paramormyrops_kingsleyae
ENSHBUG00000006823	-	99	84.475	ENSPKIG00000020112	-	96	86.124	Paramormyrops_kingsleyae
ENSHBUG00000006823	-	97	88.372	ENSPMGG00000010792	rab5c	98	89.151	Periophthalmus_magnuspinnatus
ENSHBUG00000006823	-	99	88.584	ENSPEMG00000017971	Rab5c	96	89.100	Peromyscus_maniculatus_bairdii
ENSHBUG00000006823	-	99	75.342	ENSPMAG00000007867	rab5c	97	76.303	Petromyzon_marinus
ENSHBUG00000006823	-	99	76.339	ENSPMAG00000000008	rab5c	96	78.037	Petromyzon_marinus
ENSHBUG00000006823	-	99	75.455	ENSPMAG00000001399	rab5c	97	76.777	Petromyzon_marinus
ENSHBUG00000006823	-	99	87.215	ENSPCIG00000020225	-	96	88.152	Phascolarctos_cinereus
ENSHBUG00000006823	-	100	88.288	ENSPLAG00000004790	rab5c	96	89.623	Poecilia_latipinna
ENSHBUG00000006823	-	99	92.760	ENSPLAG00000016333	-	97	92.958	Poecilia_latipinna
ENSHBUG00000006823	-	100	88.288	ENSPMEG00000011336	rab5c	96	89.623	Poecilia_mexicana
ENSHBUG00000006823	-	96	94.393	ENSPMEG00000012614	-	96	92.991	Poecilia_mexicana
ENSHBUG00000006823	-	100	88.288	ENSPREG00000010146	rab5c	96	89.623	Poecilia_reticulata
ENSHBUG00000006823	-	86	94.737	ENSPREG00000022167	-	89	96.739	Poecilia_reticulata
ENSHBUG00000006823	-	99	88.584	ENSPPYG00000008398	RAB5C	96	89.100	Pongo_abelii
ENSHBUG00000006823	-	99	88.584	ENSPCAG00000016412	RAB5C	96	89.100	Procavia_capensis
ENSHBUG00000006823	-	99	88.584	ENSPCOG00000026327	RAB5C	96	89.100	Propithecus_coquereli
ENSHBUG00000006823	-	99	89.041	ENSPVAG00000003867	RAB5C	96	89.573	Pteropus_vampyrus
ENSHBUG00000006823	-	100	100.000	ENSPNYG00000015851	-	100	100.000	Pundamilia_nyererei
ENSHBUG00000006823	-	100	86.937	ENSPNYG00000010615	rab5c	96	88.208	Pundamilia_nyererei
ENSHBUG00000006823	-	95	88.679	ENSPNAG00000002218	-	99	88.679	Pygocentrus_nattereri
ENSHBUG00000006823	-	100	88.341	ENSPNAG00000028138	rab5c	96	89.671	Pygocentrus_nattereri
ENSHBUG00000006823	-	99	89.041	ENSRNOG00000018568	Rab5c	96	89.573	Rattus_norvegicus
ENSHBUG00000006823	-	99	88.584	ENSRBIG00000031376	RAB5C	96	89.100	Rhinopithecus_bieti
ENSHBUG00000006823	-	99	88.584	ENSRROG00000032895	RAB5C	96	89.100	Rhinopithecus_roxellana
ENSHBUG00000006823	-	99	88.584	ENSSBOG00000032552	-	96	89.100	Saimiri_boliviensis_boliviensis
ENSHBUG00000006823	-	99	87.671	ENSSHAG00000005267	-	96	88.152	Sarcophilus_harrisii
ENSHBUG00000006823	-	100	81.982	ENSSFOG00015009988	-	96	83.019	Scleropages_formosus
ENSHBUG00000006823	-	95	89.100	ENSSMAG00000007323	rab5c	95	90.047	Scophthalmus_maximus
ENSHBUG00000006823	-	100	88.288	ENSSDUG00000023008	rab5c	96	89.623	Seriola_dumerili
ENSHBUG00000006823	-	100	87.387	ENSSLDG00000017771	rab5c	96	88.679	Seriola_lalandi_dorsalis
ENSHBUG00000006823	-	99	87.671	ENSSPUG00000012950	-	96	88.152	Sphenodon_punctatus
ENSHBUG00000006823	-	100	88.739	ENSSPAG00000006436	rab5c	96	90.094	Stegastes_partitus
ENSHBUG00000006823	-	99	88.584	ENSSSCG00000032467	RAB5C	96	89.100	Sus_scrofa
ENSHBUG00000006823	-	100	87.387	ENSTRUG00000015590	rab5c	96	88.679	Takifugu_rubripes
ENSHBUG00000006823	-	99	86.878	ENSTNIG00000011711	rab5c	95	89.100	Tetraodon_nigroviridis
ENSHBUG00000006823	-	99	88.584	ENSTBEG00000007092	RAB5C	96	89.100	Tupaia_belangeri
ENSHBUG00000006823	-	99	88.584	ENSTTRG00000006673	RAB5C	96	89.100	Tursiops_truncatus
ENSHBUG00000006823	-	99	88.584	ENSUAMG00000024343	RAB5C	96	89.100	Ursus_americanus
ENSHBUG00000006823	-	99	88.584	ENSUMAG00000023270	RAB5C	96	89.100	Ursus_maritimus
ENSHBUG00000006823	-	100	88.739	ENSXCOG00000016788	rab5c	99	90.094	Xiphophorus_couchianus
ENSHBUG00000006823	-	95	95.714	ENSXCOG00000006300	-	97	92.130	Xiphophorus_couchianus
ENSHBUG00000006823	-	100	88.288	ENSXMAG00000003266	rab5c	96	89.623	Xiphophorus_maculatus
ENSHBUG00000006823	-	99	93.607	ENSXMAG00000022179	-	97	92.130	Xiphophorus_maculatus