EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000006827 (Gene tree)
Gene ID: 102311933
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 5109 bases
Position: chrJH425603.1:775045-780153
Accession: 102311933
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000025028	Glu-tRNAGln	PF02686.15	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000007043	-	3005	XM_005940196	ENSHBUP00000025028	192 (aa)	XP_005940258	UPI0003BCDB13

Gene Model

Click here to download ENSHBUG00000006827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000006827's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000006827	gatc	53	64.356	ENSG00000257218	GATC	100	72.340	Homo_sapiens
ENSHBUG00000006827	gatc	56	59.813	ENSAMEG00000013298	-	79	59.813	Ailuropoda_melanoleuca
ENSHBUG00000006827	gatc	58	82.143	ENSACIG00000016853	gatc	80	82.143	Amphilophus_citrinellus
ENSHBUG00000006827	gatc	64	89.431	ENSAOCG00000014641	gatc	98	89.431	Amphiprion_ocellaris
ENSHBUG00000006827	gatc	100	73.333	ENSAPEG00000023411	gatc	100	73.333	Amphiprion_percula
ENSHBUG00000006827	gatc	53	65.347	ENSANAG00000034389	-	74	65.347	Aotus_nancymaae
ENSHBUG00000006827	gatc	100	97.396	ENSACLG00000026251	gatc	100	97.396	Astatotilapia_calliptera
ENSHBUG00000006827	gatc	68	77.099	ENSAMXG00000004252	gatc	74	64.162	Astyanax_mexicanus
ENSHBUG00000006827	gatc	53	60.396	ENSBTAG00000012791	GATC	74	60.396	Bos_taurus
ENSHBUG00000006827	gatc	56	39.815	WBGene00013433	Y66D12A.7	62	39.815	Caenorhabditis_elegans
ENSHBUG00000006827	gatc	53	65.347	ENSCJAG00000001183	-	55	65.347	Callithrix_jacchus
ENSHBUG00000006827	gatc	53	63.366	ENSCAFG00000010311	-	74	63.366	Canis_familiaris
ENSHBUG00000006827	gatc	53	63.366	ENSCAFG00020020606	-	74	63.366	Canis_lupus_dingo
ENSHBUG00000006827	gatc	52	61.616	ENSCHIG00000019423	-	73	61.616	Capra_hircus
ENSHBUG00000006827	gatc	53	64.356	ENSTSYG00000006845	-	74	64.356	Carlito_syrichta
ENSHBUG00000006827	gatc	53	65.347	ENSCCAG00000022235	-	74	65.347	Cebus_capucinus
ENSHBUG00000006827	gatc	53	64.356	ENSCATG00000038807	GATC	74	64.356	Cercocebus_atys
ENSHBUG00000006827	gatc	51	63.918	ENSCLAG00000011015	-	61	63.918	Chinchilla_lanigera
ENSHBUG00000006827	gatc	53	65.347	ENSCSAG00000002259	GATC	74	65.347	Chlorocebus_sabaeus
ENSHBUG00000006827	gatc	53	63.366	ENSCHOG00000009235	-	74	63.366	Choloepus_hoffmanni
ENSHBUG00000006827	gatc	64	62.295	ENSCPBG00000011342	-	65	62.295	Chrysemys_picta_bellii
ENSHBUG00000006827	gatc	53	64.356	ENSCANG00000031071	GATC	74	64.356	Colobus_angolensis_palliatus
ENSHBUG00000006827	gatc	72	49.640	ENSCGRG00001019220	-	88	49.640	Cricetulus_griseus_chok1gshd
ENSHBUG00000006827	gatc	72	49.640	ENSCGRG00000004184	-	88	49.640	Cricetulus_griseus_crigri
ENSHBUG00000006827	gatc	100	55.729	ENSCSEG00000016618	-	100	55.729	Cynoglossus_semilaevis
ENSHBUG00000006827	gatc	99	62.632	ENSCSEG00000007798	gatc	93	62.632	Cynoglossus_semilaevis
ENSHBUG00000006827	gatc	99	65.789	ENSCVAG00000004364	gatc	100	65.789	Cyprinodon_variegatus
ENSHBUG00000006827	gatc	81	66.242	ENSDARG00000056855	gatc	83	66.242	Danio_rerio
ENSHBUG00000006827	gatc	55	56.410	ENSDNOG00000012593	-	62	56.410	Dasypus_novemcinctus
ENSHBUG00000006827	gatc	61	40.678	FBgn0064115	GatC	73	40.678	Drosophila_melanogaster
ENSHBUG00000006827	gatc	54	55.238	ENSETEG00000002604	-	77	55.238	Echinops_telfairi
ENSHBUG00000006827	gatc	51	46.939	ENSEBUG00000008772	gatc	56	46.939	Eptatretus_burgeri
ENSHBUG00000006827	gatc	53	65.347	ENSECAG00000011118	-	74	65.347	Equus_caballus
ENSHBUG00000006827	gatc	52	59.000	ENSEEUG00000011638	-	74	59.000	Erinaceus_europaeus
ENSHBUG00000006827	gatc	66	73.846	ENSELUG00000012608	gatc	97	61.905	Esox_lucius
ENSHBUG00000006827	gatc	55	60.952	ENSFCAG00000038718	-	77	60.952	Felis_catus
ENSHBUG00000006827	gatc	59	59.649	ENSFALG00000007564	-	75	59.649	Ficedula_albicollis
ENSHBUG00000006827	gatc	55	63.810	ENSFDAG00000018720	-	77	63.810	Fukomys_damarensis
ENSHBUG00000006827	gatc	98	67.021	ENSFHEG00000014992	GATC	99	67.021	Fundulus_heteroclitus
ENSHBUG00000006827	gatc	76	69.178	ENSGMOG00000008742	gatc	90	69.178	Gadus_morhua
ENSHBUG00000006827	gatc	55	59.434	ENSGALG00000007195	-	80	58.036	Gallus_gallus
ENSHBUG00000006827	gatc	68	75.385	ENSGAFG00000012801	gatc	82	75.385	Gambusia_affinis
ENSHBUG00000006827	gatc	100	69.072	ENSGACG00000008973	gatc	100	69.072	Gasterosteus_aculeatus
ENSHBUG00000006827	gatc	67	60.938	ENSGAGG00000016018	-	70	60.938	Gopherus_agassizii
ENSHBUG00000006827	gatc	56	62.617	ENSHGLG00000011394	GATC	79	62.617	Heterocephalus_glaber_female
ENSHBUG00000006827	gatc	56	60.748	ENSHGLG00100018850	-	78	60.748	Heterocephalus_glaber_male
ENSHBUG00000006827	gatc	67	81.250	ENSHCOG00000009209	gatc	100	81.250	Hippocampus_comes
ENSHBUG00000006827	gatc	90	62.428	ENSIPUG00000023072	gatc	76	63.584	Ictalurus_punctatus
ENSHBUG00000006827	gatc	52	64.646	ENSSTOG00000025740	-	65	64.646	Ictidomys_tridecemlineatus
ENSHBUG00000006827	gatc	51	64.948	ENSJJAG00000000369	Gatc	61	64.948	Jaculus_jaculus
ENSHBUG00000006827	gatc	67	78.295	ENSKMAG00000016476	gatc	99	78.295	Kryptolebias_marmoratus
ENSHBUG00000006827	gatc	100	65.625	ENSLBEG00000007603	gatc	100	65.625	Labrus_bergylta
ENSHBUG00000006827	gatc	81	50.323	ENSLACG00000018239	-	75	50.323	Latimeria_chalumnae
ENSHBUG00000006827	gatc	76	67.568	ENSLOCG00000004056	gatc	80	67.568	Lepisosteus_oculatus
ENSHBUG00000006827	gatc	53	64.356	ENSMFAG00000034197	GATC	74	64.356	Macaca_fascicularis
ENSHBUG00000006827	gatc	53	64.356	ENSMMUG00000046665	GATC	74	64.356	Macaca_mulatta
ENSHBUG00000006827	gatc	53	64.356	ENSMNEG00000034653	GATC	74	64.356	Macaca_nemestrina
ENSHBUG00000006827	gatc	53	65.347	ENSMLEG00000039862	GATC	74	65.347	Mandrillus_leucophaeus
ENSHBUG00000006827	gatc	100	69.792	ENSMAMG00000015851	gatc	100	69.792	Mastacembelus_armatus
ENSHBUG00000006827	gatc	100	97.917	ENSMZEG00005016072	gatc	100	97.917	Maylandia_zebra
ENSHBUG00000006827	gatc	55	61.321	ENSMGAG00000008733	-	100	61.321	Meleagris_gallopavo
ENSHBUG00000006827	gatc	60	56.034	ENSMAUG00000012756	Gatc	75	56.034	Mesocricetus_auratus
ENSHBUG00000006827	gatc	53	65.347	ENSMICG00000008669	-	74	65.347	Microcebus_murinus
ENSHBUG00000006827	gatc	50	64.583	ENSMOCG00000005051	Gatc	62	64.583	Microtus_ochrogaster
ENSHBUG00000006827	gatc	65	74.603	ENSMMOG00000017695	gatc	95	78.947	Mola_mola
ENSHBUG00000006827	gatc	54	62.136	ENSMODG00000003152	-	78	62.136	Monodelphis_domestica
ENSHBUG00000006827	gatc	50	65.625	MGP_PahariEiJ_G0024203	Gatc	62	65.625	Mus_pahari
ENSHBUG00000006827	gatc	56	60.748	ENSMPUG00000003183	-	79	60.748	Mustela_putorius_furo
ENSHBUG00000006827	gatc	100	98.958	ENSNBRG00000007810	gatc	100	98.958	Neolamprologus_brichardi
ENSHBUG00000006827	gatc	55	62.857	ENSNLEG00000015651	GATC	77	62.857	Nomascus_leucogenys
ENSHBUG00000006827	gatc	54	61.538	ENSMEUG00000004064	-	83	62.136	Notamacropus_eugenii
ENSHBUG00000006827	gatc	52	66.667	ENSOPRG00000004226	-	73	66.667	Ochotona_princeps
ENSHBUG00000006827	gatc	67	96.947	ENSONIG00000013444	gatc	90	96.947	Oreochromis_niloticus
ENSHBUG00000006827	gatc	56	62.617	ENSOCUG00000009867	-	79	62.617	Oryctolagus_cuniculus
ENSHBUG00000006827	gatc	63	81.818	ENSORLG00000007156	gatc	100	81.818	Oryzias_latipes
ENSHBUG00000006827	gatc	100	65.104	ENSORLG00020014991	gatc	100	65.104	Oryzias_latipes_hni
ENSHBUG00000006827	gatc	100	64.583	ENSORLG00015003450	gatc	100	64.583	Oryzias_latipes_hsok
ENSHBUG00000006827	gatc	100	65.657	ENSOMEG00000002280	gatc	100	65.657	Oryzias_melastigma
ENSHBUG00000006827	gatc	55	62.857	ENSOGAG00000003850	-	96	62.857	Otolemur_garnettii
ENSHBUG00000006827	gatc	60	55.372	ENSOARG00000012338	-	94	55.372	Ovis_aries
ENSHBUG00000006827	gatc	53	63.366	ENSPPAG00000029164	GATC	74	63.366	Pan_paniscus
ENSHBUG00000006827	gatc	56	59.813	ENSPPRG00000000929	-	79	59.813	Panthera_pardus
ENSHBUG00000006827	gatc	56	59.813	ENSPTIG00000009889	-	79	59.813	Panthera_tigris_altaica
ENSHBUG00000006827	gatc	53	63.366	ENSPTRG00000049887	GATC	75	63.366	Pan_troglodytes
ENSHBUG00000006827	gatc	53	63.366	ENSPANG00000033975	GATC	74	63.366	Papio_anubis
ENSHBUG00000006827	gatc	77	61.905	ENSPKIG00000024856	gatc	76	61.905	Paramormyrops_kingsleyae
ENSHBUG00000006827	gatc	58	64.865	ENSPSIG00000011112	-	95	64.865	Pelodiscus_sinensis
ENSHBUG00000006827	gatc	67	82.812	ENSPMGG00000018829	gatc	82	82.812	Periophthalmus_magnuspinnatus
ENSHBUG00000006827	gatc	97	69.519	ENSPFOG00000011603	gatc	98	69.519	Poecilia_formosa
ENSHBUG00000006827	gatc	97	68.984	ENSPLAG00000002471	gatc	98	68.984	Poecilia_latipinna
ENSHBUG00000006827	gatc	97	68.984	ENSPMEG00000020958	gatc	98	68.984	Poecilia_mexicana
ENSHBUG00000006827	gatc	58	84.685	ENSPREG00000022256	gatc	75	84.685	Poecilia_reticulata
ENSHBUG00000006827	gatc	56	61.682	ENSPPYG00000005030	GATC	79	61.682	Pongo_abelii
ENSHBUG00000006827	gatc	53	62.376	ENSPCAG00000013864	-	74	62.376	Procavia_capensis
ENSHBUG00000006827	gatc	51	64.948	ENSPVAG00000002228	-	72	64.948	Pteropus_vampyrus
ENSHBUG00000006827	gatc	100	97.917	ENSPNYG00000016015	gatc	100	97.917	Pundamilia_nyererei
ENSHBUG00000006827	gatc	69	75.000	ENSPNAG00000001239	gatc	75	63.006	Pygocentrus_nattereri
ENSHBUG00000006827	gatc	53	63.366	ENSRBIG00000033363	GATC	74	63.366	Rhinopithecus_bieti
ENSHBUG00000006827	gatc	53	63.366	ENSRROG00000042802	GATC	74	63.366	Rhinopithecus_roxellana
ENSHBUG00000006827	gatc	53	63.366	ENSSBOG00000033750	-	74	63.366	Saimiri_boliviensis_boliviensis
ENSHBUG00000006827	gatc	55	62.264	ENSSHAG00000005745	-	100	62.264	Sarcophilus_harrisii
ENSHBUG00000006827	gatc	88	59.302	ENSSFOG00015002508	gatc	91	60.544	Scleropages_formosus
ENSHBUG00000006827	gatc	100	71.875	ENSSMAG00000014280	gatc	100	71.875	Scophthalmus_maximus
ENSHBUG00000006827	gatc	100	72.821	ENSSDUG00000012206	gatc	100	72.821	Seriola_dumerili
ENSHBUG00000006827	gatc	100	73.333	ENSSLDG00000025159	gatc	98	73.333	Seriola_lalandi_dorsalis
ENSHBUG00000006827	gatc	63	54.545	ENSSPUG00000015693	-	70	63.918	Sphenodon_punctatus
ENSHBUG00000006827	gatc	100	73.438	ENSSPAG00000011860	gatc	100	73.438	Stegastes_partitus
ENSHBUG00000006827	gatc	55	64.151	ENSTGUG00000009561	-	98	64.151	Taeniopygia_guttata
ENSHBUG00000006827	gatc	100	64.103	ENSTRUG00000021596	gatc	96	64.103	Takifugu_rubripes
ENSHBUG00000006827	gatc	100	63.776	ENSTNIG00000015879	gatc	95	63.776	Tetraodon_nigroviridis
ENSHBUG00000006827	gatc	52	65.657	ENSTTRG00000000144	GATC	73	65.657	Tursiops_truncatus
ENSHBUG00000006827	gatc	56	60.748	ENSUAMG00000015523	-	79	60.748	Ursus_americanus
ENSHBUG00000006827	gatc	53	63.366	ENSVVUG00000021055	-	74	63.366	Vulpes_vulpes
ENSHBUG00000006827	gatc	58	83.784	ENSXCOG00000017087	gatc	81	83.784	Xiphophorus_couchianus
ENSHBUG00000006827	gatc	99	66.316	ENSXMAG00000018267	gatc	100	66.316	Xiphophorus_maculatus