EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000006831 (Gene tree)
Gene ID: 102309795
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 19784 bases
Position: chrJH425355.1:2711980-2731763
Accession: 102309795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000005431	RNase_Zc3h12a	PF11977.8	6e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000007009	-	6994	XM_005920058	ENSHBUP00000005431	963 (aa)	XP_005920120	UPI0003BCF521

Gene Model

Click here to download ENSHBUG00000006831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000006831's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000006831	-	83	45.411	ENSHBUG00000000645	zc3h12b	61	71.469

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000006831	-	79	84.115	ENSAPOG00000015355	-	82	83.594	Acanthochromis_polyacanthus
ENSHBUG00000006831	-	83	49.112	ENSAPOG00000001632	-	83	73.824	Acanthochromis_polyacanthus
ENSHBUG00000006831	-	100	74.147	ENSACIG00000001362	-	97	75.567	Amphilophus_citrinellus
ENSHBUG00000006831	-	99	86.068	ENSAOCG00000003866	-	98	86.716	Amphiprion_ocellaris
ENSHBUG00000006831	-	100	78.292	ENSAPEG00000005727	-	99	87.438	Amphiprion_percula
ENSHBUG00000006831	-	72	80.401	ENSAPEG00000018582	-	99	86.441	Amphiprion_percula
ENSHBUG00000006831	-	100	83.864	ENSATEG00000004134	-	100	83.556	Anabas_testudineus
ENSHBUG00000006831	-	83	48.095	ENSATEG00000002260	-	83	81.116	Anabas_testudineus
ENSHBUG00000006831	-	64	53.736	ENSACLG00000018493	-	99	43.953	Astatotilapia_calliptera
ENSHBUG00000006831	-	100	99.688	ENSACLG00000027924	-	100	99.688	Astatotilapia_calliptera
ENSHBUG00000006831	-	86	78.117	ENSCSEG00000010073	-	96	83.860	Cynoglossus_semilaevis
ENSHBUG00000006831	-	83	47.738	ENSCSEG00000008542	-	99	43.542	Cynoglossus_semilaevis
ENSHBUG00000006831	-	100	76.543	ENSCVAG00000002328	-	100	76.103	Cyprinodon_variegatus
ENSHBUG00000006831	-	83	57.998	ENSELUG00000009319	-	95	58.049	Esox_lucius
ENSHBUG00000006831	-	83	50.592	ENSELUG00000005470	-	100	47.852	Esox_lucius
ENSHBUG00000006831	-	91	85.417	ENSFHEG00000021225	-	100	85.417	Fundulus_heteroclitus
ENSHBUG00000006831	-	70	50.000	ENSGMOG00000017975	-	100	50.000	Gadus_morhua
ENSHBUG00000006831	-	100	74.230	ENSGAFG00000005290	-	100	73.690	Gambusia_affinis
ENSHBUG00000006831	-	72	46.341	ENSGACG00000001339	-	98	60.000	Gasterosteus_aculeatus
ENSHBUG00000006831	-	72	71.347	ENSGACG00000014201	-	100	83.824	Gasterosteus_aculeatus
ENSHBUG00000006831	-	100	63.731	ENSHCOG00000008878	-	99	85.714	Hippocampus_comes
ENSHBUG00000006831	-	100	75.873	ENSKMAG00000011694	-	100	75.692	Kryptolebias_marmoratus
ENSHBUG00000006831	-	100	79.633	ENSLBEG00000003547	-	100	79.391	Labrus_bergylta
ENSHBUG00000006831	-	83	49.286	ENSLBEG00000012710	-	99	45.142	Labrus_bergylta
ENSHBUG00000006831	-	97	79.303	ENSLBEG00000012554	-	99	84.328	Labrus_bergylta
ENSHBUG00000006831	-	99	76.771	ENSMAMG00000021794	-	98	87.454	Mastacembelus_armatus
ENSHBUG00000006831	-	83	49.153	ENSMAMG00000020372	-	99	44.510	Mastacembelus_armatus
ENSHBUG00000006831	-	64	53.736	ENSMZEG00005019137	-	90	70.323	Maylandia_zebra
ENSHBUG00000006831	-	100	99.585	ENSMZEG00005007718	-	100	99.585	Maylandia_zebra
ENSHBUG00000006831	-	96	75.403	ENSMMOG00000005728	-	99	83.701	Mola_mola
ENSHBUG00000006831	-	83	48.317	ENSMMOG00000019526	-	79	49.041	Mola_mola
ENSHBUG00000006831	-	100	80.639	ENSMALG00000010501	-	100	80.742	Monopterus_albus
ENSHBUG00000006831	-	64	51.962	ENSNBRG00000012175	-	90	70.323	Neolamprologus_brichardi
ENSHBUG00000006831	-	100	98.754	ENSNBRG00000006978	-	100	98.754	Neolamprologus_brichardi
ENSHBUG00000006831	-	100	97.513	ENSONIG00000012268	-	100	97.513	Oreochromis_niloticus
ENSHBUG00000006831	-	99	71.344	ENSORLG00000029243	-	99	79.447	Oryzias_latipes
ENSHBUG00000006831	-	100	75.311	ENSORLG00020017005	-	100	75.386	Oryzias_latipes_hni
ENSHBUG00000006831	-	100	75.311	ENSORLG00015015211	-	100	75.517	Oryzias_latipes_hsok
ENSHBUG00000006831	-	100	76.763	ENSOMEG00000006666	-	100	76.471	Oryzias_melastigma
ENSHBUG00000006831	-	66	78.481	ENSPMGG00000009790	-	98	78.797	Periophthalmus_magnuspinnatus
ENSHBUG00000006831	-	100	75.770	ENSPLAG00000009867	-	100	75.231	Poecilia_latipinna
ENSHBUG00000006831	-	100	76.186	ENSPMEG00000006624	-	100	75.645	Poecilia_mexicana
ENSHBUG00000006831	-	86	63.636	ENSPMEG00000011676	-	99	41.798	Poecilia_mexicana
ENSHBUG00000006831	-	83	47.094	ENSPREG00000001607	-	73	80.263	Poecilia_reticulata
ENSHBUG00000006831	-	100	75.848	ENSPREG00000010838	-	100	75.309	Poecilia_reticulata
ENSHBUG00000006831	-	100	83.436	ENSSMAG00000007545	-	100	82.582	Scophthalmus_maximus
ENSHBUG00000006831	-	99	45.005	ENSSMAG00000007258	-	99	45.320	Scophthalmus_maximus
ENSHBUG00000006831	-	83	51.251	ENSSDUG00000013237	-	90	66.225	Seriola_dumerili
ENSHBUG00000006831	-	100	85.553	ENSSDUG00000021864	-	100	85.348	Seriola_dumerili
ENSHBUG00000006831	-	100	85.451	ENSSLDG00000012268	-	100	85.143	Seriola_lalandi_dorsalis
ENSHBUG00000006831	-	83	51.435	ENSSLDG00000004886	-	99	46.411	Seriola_lalandi_dorsalis
ENSHBUG00000006831	-	100	88.284	ENSSPAG00000009485	-	100	88.078	Stegastes_partitus
ENSHBUG00000006831	-	99	46.230	ENSSPAG00000001850	-	99	45.427	Stegastes_partitus
ENSHBUG00000006831	-	99	75.335	ENSTRUG00000022519	-	99	75.851	Takifugu_rubripes
ENSHBUG00000006831	-	73	67.549	ENSTNIG00000014519	-	97	87.805	Tetraodon_nigroviridis
ENSHBUG00000006831	-	100	75.128	ENSXMAG00000027171	-	100	74.897	Xiphophorus_maculatus
ENSHBUG00000006831	-	83	47.337	ENSXMAG00000014715	-	83	80.435	Xiphophorus_maculatus