EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000007125 (Gene tree)
Gene ID: 102298240
Gene Symbol: rif1
Alias: fc38c03|si:dkey-89p3.2|wu:fc38c03
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 23868 bases
Position: chrJH425477.1:1351740-1375607
Accession: 102298240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000005738	Rif1_N	PF12231.8	2.4e-80	1	1
ENSHBUP00000005747	Rif1_N	PF12231.8	2.6e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000006494	-	9306	-	ENSHBUP00000005738	2260 (aa)	-	-
ENSHBUT00000006512	-	9179	XM_005933433	ENSHBUP00000005747	2354 (aa)	XP_005933495	UPI0003BD25DD

Gene Model

Click here to download ENSHBUG00000007125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000007125's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000007125	rif1	73	49.850	ENSG00000080345	RIF1	97	54.733	Homo_sapiens
ENSHBUG00000007125	rif1	99	70.748	ENSAPOG00000011073	rif1	96	70.934	Acanthochromis_polyacanthus
ENSHBUG00000007125	rif1	66	54.902	ENSAMEG00000008461	RIF1	73	54.902	Ailuropoda_melanoleuca
ENSHBUG00000007125	rif1	65	80.527	ENSACIG00000017765	rif1	65	80.595	Amphilophus_citrinellus
ENSHBUG00000007125	rif1	97	77.491	ENSAPEG00000013228	rif1	100	77.491	Amphiprion_percula
ENSHBUG00000007125	rif1	97	83.333	ENSATEG00000022887	rif1	99	68.369	Anabas_testudineus
ENSHBUG00000007125	rif1	56	49.047	ENSACAG00000003714	RIF1	54	48.543	Anolis_carolinensis
ENSHBUG00000007125	rif1	68	55.823	ENSANAG00000024840	RIF1	63	55.823	Aotus_nancymaae
ENSHBUG00000007125	rif1	66	58.711	ENSAMXG00000010910	rif1	71	75.410	Astyanax_mexicanus
ENSHBUG00000007125	rif1	54	60.656	ENSBTAG00000021020	RIF1	68	60.656	Bos_taurus
ENSHBUG00000007125	rif1	55	50.898	ENSCAFG00020016401	RIF1	64	44.962	Canis_lupus_dingo
ENSHBUG00000007125	rif1	66	52.308	ENSCHIG00000020327	RIF1	73	54.118	Capra_hircus
ENSHBUG00000007125	rif1	67	58.723	ENSTSYG00000008861	RIF1	61	58.723	Carlito_syrichta
ENSHBUG00000007125	rif1	56	47.390	ENSCAPG00000008957	RIF1	76	47.390	Cavia_aperea
ENSHBUG00000007125	rif1	53	49.426	ENSCPOG00000037898	RIF1	64	43.830	Cavia_porcellus
ENSHBUG00000007125	rif1	55	48.913	ENSCCAG00000024760	RIF1	63	43.593	Cebus_capucinus
ENSHBUG00000007125	rif1	78	51.296	ENSCATG00000033353	RIF1	72	51.377	Cercocebus_atys
ENSHBUG00000007125	rif1	65	55.823	ENSCSAG00000016089	RIF1	61	55.823	Chlorocebus_sabaeus
ENSHBUG00000007125	rif1	93	48.000	ENSCPBG00000025885	RIF1	64	52.386	Chrysemys_picta_bellii
ENSHBUG00000007125	rif1	78	50.236	ENSCANG00000028962	RIF1	71	51.494	Colobus_angolensis_palliatus
ENSHBUG00000007125	rif1	70	50.391	ENSCGRG00001024589	Rif1	65	53.785	Cricetulus_griseus_chok1gshd
ENSHBUG00000007125	rif1	68	50.391	ENSCGRG00000010713	Rif1	65	53.785	Cricetulus_griseus_crigri
ENSHBUG00000007125	rif1	99	58.848	ENSCSEG00000003945	rif1	99	58.647	Cynoglossus_semilaevis
ENSHBUG00000007125	rif1	63	57.576	ENSDARG00000062650	rif1	60	57.629	Danio_rerio
ENSHBUG00000007125	rif1	65	57.848	ENSETEG00000012421	RIF1	60	57.848	Echinops_telfairi
ENSHBUG00000007125	rif1	68	55.823	ENSEASG00005023434	RIF1	75	55.823	Equus_asinus_asinus
ENSHBUG00000007125	rif1	67	59.731	ENSECAG00000012679	RIF1	77	59.731	Equus_caballus
ENSHBUG00000007125	rif1	90	72.761	ENSELUG00000006826	rif1	64	72.761	Esox_lucius
ENSHBUG00000007125	rif1	66	56.067	ENSFCAG00000029742	RIF1	60	56.067	Felis_catus
ENSHBUG00000007125	rif1	59	46.583	ENSFALG00000013874	RIF1	52	52.931	Ficedula_albicollis
ENSHBUG00000007125	rif1	67	53.600	ENSFDAG00000006538	RIF1	62	53.600	Fukomys_damarensis
ENSHBUG00000007125	rif1	100	62.556	ENSFHEG00000013721	rif1	99	62.664	Fundulus_heteroclitus
ENSHBUG00000007125	rif1	72	61.765	ENSGMOG00000003517	rif1	99	61.765	Gadus_morhua
ENSHBUG00000007125	rif1	96	77.484	ENSGAFG00000017196	rif1	99	77.484	Gambusia_affinis
ENSHBUG00000007125	rif1	95	78.541	ENSGACG00000008579	rif1	99	73.643	Gasterosteus_aculeatus
ENSHBUG00000007125	rif1	66	53.184	ENSGAGG00000012595	RIF1	74	49.388	Gopherus_agassizii
ENSHBUG00000007125	rif1	60	59.195	ENSGGOG00000040178	RIF1	60	59.195	Gorilla_gorilla
ENSHBUG00000007125	rif1	74	50.500	ENSHGLG00100009807	RIF1	85	45.346	Heterocephalus_glaber_male
ENSHBUG00000007125	rif1	99	65.752	ENSHCOG00000015943	rif1	66	78.884	Hippocampus_comes
ENSHBUG00000007125	rif1	67	56.722	ENSIPUG00000021703	rif1	81	58.605	Ictalurus_punctatus
ENSHBUG00000007125	rif1	70	53.543	ENSSTOG00000020712	RIF1	73	55.823	Ictidomys_tridecemlineatus
ENSHBUG00000007125	rif1	59	46.754	ENSJJAG00000023000	Rif1	55	46.969	Jaculus_jaculus
ENSHBUG00000007125	rif1	100	62.587	ENSKMAG00000002852	rif1	99	62.752	Kryptolebias_marmoratus
ENSHBUG00000007125	rif1	99	69.919	ENSLBEG00000023196	rif1	94	70.442	Labrus_bergylta
ENSHBUG00000007125	rif1	57	53.368	ENSLACG00000005425	RIF1	56	53.438	Latimeria_chalumnae
ENSHBUG00000007125	rif1	81	66.052	ENSLOCG00000002657	rif1	73	51.683	Lepisosteus_oculatus
ENSHBUG00000007125	rif1	76	50.939	ENSMFAG00000032233	RIF1	72	51.019	Macaca_fascicularis
ENSHBUG00000007125	rif1	76	50.939	ENSMMUG00000008611	RIF1	72	51.019	Macaca_mulatta
ENSHBUG00000007125	rif1	76	51.218	ENSMNEG00000031616	RIF1	72	51.298	Macaca_nemestrina
ENSHBUG00000007125	rif1	65	57.083	ENSMLEG00000042945	RIF1	60	57.083	Mandrillus_leucophaeus
ENSHBUG00000007125	rif1	59	80.508	ENSMAMG00000001745	rif1	63	69.814	Mastacembelus_armatus
ENSHBUG00000007125	rif1	96	96.461	ENSMZEG00005020920	rif1	99	96.461	Maylandia_zebra
ENSHBUG00000007125	rif1	66	64.187	ENSMAUG00000013158	Rif1	66	64.187	Mesocricetus_auratus
ENSHBUG00000007125	rif1	55	51.087	ENSMICG00000046127	RIF1	63	45.249	Microcebus_murinus
ENSHBUG00000007125	rif1	68	51.923	ENSMOCG00000009381	Rif1	64	51.923	Microtus_ochrogaster
ENSHBUG00000007125	rif1	99	60.986	ENSMMOG00000006519	rif1	99	60.121	Mola_mola
ENSHBUG00000007125	rif1	69	55.967	ENSMODG00000003703	RIF1	66	55.967	Monodelphis_domestica
ENSHBUG00000007125	rif1	98	68.873	ENSMALG00000016759	rif1	99	68.682	Monopterus_albus
ENSHBUG00000007125	rif1	54	51.522	MGP_CAROLIEiJ_G0023555	Rif1	51	51.843	Mus_caroli
ENSHBUG00000007125	rif1	69	50.542	ENSMUSG00000036202	Rif1	74	50.542	Mus_musculus
ENSHBUG00000007125	rif1	67	48.919	MGP_PahariEiJ_G0025006	Rif1	74	51.087	Mus_pahari
ENSHBUG00000007125	rif1	66	45.844	ENSMPUG00000000371	RIF1	73	54.118	Mustela_putorius_furo
ENSHBUG00000007125	rif1	55	53.968	ENSMLUG00000003376	RIF1	71	53.968	Myotis_lucifugus
ENSHBUG00000007125	rif1	57	49.850	ENSNGAG00000009268	Rif1	54	49.850	Nannospalax_galili
ENSHBUG00000007125	rif1	98	89.800	ENSNBRG00000014257	rif1	100	88.378	Neolamprologus_brichardi
ENSHBUG00000007125	rif1	70	48.895	ENSNLEG00000010955	RIF1	65	49.115	Nomascus_leucogenys
ENSHBUG00000007125	rif1	50	63.274	ENSMEUG00000007601	-	51	63.274	Notamacropus_eugenii
ENSHBUG00000007125	rif1	65	51.515	ENSODEG00000003950	RIF1	76	51.515	Octodon_degus
ENSHBUG00000007125	rif1	99	92.950	ENSONIG00000013657	rif1	100	91.827	Oreochromis_niloticus
ENSHBUG00000007125	rif1	59	53.818	ENSOANG00000006078	-	57	53.818	Ornithorhynchus_anatinus
ENSHBUG00000007125	rif1	66	56.410	ENSOCUG00000017435	RIF1	62	56.410	Oryctolagus_cuniculus
ENSHBUG00000007125	rif1	99	58.621	ENSORLG00020001302	rif1	99	57.984	Oryzias_latipes_hni
ENSHBUG00000007125	rif1	99	58.579	ENSORLG00015000009	rif1	99	57.661	Oryzias_latipes_hsok
ENSHBUG00000007125	rif1	99	58.409	ENSOMEG00000021513	rif1	99	57.255	Oryzias_melastigma
ENSHBUG00000007125	rif1	65	54.400	ENSOGAG00000006141	RIF1	63	51.730	Otolemur_garnettii
ENSHBUG00000007125	rif1	65	57.261	ENSPPAG00000023754	RIF1	62	56.846	Pan_paniscus
ENSHBUG00000007125	rif1	66	56.067	ENSPPRG00000003618	RIF1	60	56.067	Panthera_pardus
ENSHBUG00000007125	rif1	66	56.067	ENSPTIG00000020652	RIF1	60	56.067	Panthera_tigris_altaica
ENSHBUG00000007125	rif1	66	54.864	ENSPTRG00000012534	RIF1	61	54.475	Pan_troglodytes
ENSHBUG00000007125	rif1	65	57.083	ENSPANG00000008525	RIF1	60	57.083	Papio_anubis
ENSHBUG00000007125	rif1	65	56.040	ENSPKIG00000004267	rif1	66	55.185	Paramormyrops_kingsleyae
ENSHBUG00000007125	rif1	79	70.000	ENSPMGG00000016141	rif1	89	70.000	Periophthalmus_magnuspinnatus
ENSHBUG00000007125	rif1	66	59.375	ENSPCIG00000009185	RIF1	61	59.375	Phascolarctos_cinereus
ENSHBUG00000007125	rif1	92	62.766	ENSPFOG00000000554	-	99	62.267	Poecilia_formosa
ENSHBUG00000007125	rif1	100	63.905	ENSPFOG00000017804	rif1	99	63.719	Poecilia_formosa
ENSHBUG00000007125	rif1	96	72.064	ENSPLAG00000017945	rif1	99	71.780	Poecilia_latipinna
ENSHBUG00000007125	rif1	90	61.820	ENSPMEG00000006897	-	99	61.563	Poecilia_mexicana
ENSHBUG00000007125	rif1	91	77.533	ENSPREG00000018052	rif1	96	77.533	Poecilia_reticulata
ENSHBUG00000007125	rif1	80	49.776	ENSPPYG00000012846	RIF1	69	49.851	Pongo_abelii
ENSHBUG00000007125	rif1	55	50.584	ENSPCOG00000027888	RIF1	51	50.935	Propithecus_coquereli
ENSHBUG00000007125	rif1	60	60.656	ENSPVAG00000014276	RIF1	57	60.656	Pteropus_vampyrus
ENSHBUG00000007125	rif1	99	86.658	ENSPNYG00000012940	rif1	99	85.930	Pundamilia_nyererei
ENSHBUG00000007125	rif1	57	47.839	ENSRNOG00000054901	Rif1	63	44.395	Rattus_norvegicus
ENSHBUG00000007125	rif1	54	50.713	ENSRBIG00000003704	RIF1	71	50.873	Rhinopithecus_bieti
ENSHBUG00000007125	rif1	76	51.016	ENSRROG00000028206	RIF1	72	51.095	Rhinopithecus_roxellana
ENSHBUG00000007125	rif1	68	52.128	ENSSBOG00000029530	RIF1	66	47.435	Saimiri_boliviensis_boliviensis
ENSHBUG00000007125	rif1	76	50.951	ENSSHAG00000018552	RIF1	72	50.951	Sarcophilus_harrisii
ENSHBUG00000007125	rif1	77	68.797	ENSSFOG00015021539	rif1	88	57.728	Scleropages_formosus
ENSHBUG00000007125	rif1	99	85.878	ENSSMAG00000011704	rif1	91	85.878	Scophthalmus_maximus
ENSHBUG00000007125	rif1	75	89.189	ENSSDUG00000015632	rif1	73	88.889	Seriola_dumerili
ENSHBUG00000007125	rif1	62	54.393	ENSSPUG00000003062	RIF1	69	52.286	Sphenodon_punctatus
ENSHBUG00000007125	rif1	66	76.628	ENSSPAG00000018359	rif1	100	76.628	Stegastes_partitus
ENSHBUG00000007125	rif1	68	53.585	ENSSSCG00000016395	RIF1	73	53.208	Sus_scrofa
ENSHBUG00000007125	rif1	99	61.934	ENSTRUG00000015808	rif1	99	61.696	Takifugu_rubripes
ENSHBUG00000007125	rif1	99	59.130	ENSTNIG00000011538	rif1	99	58.296	Tetraodon_nigroviridis
ENSHBUG00000007125	rif1	63	62.651	ENSTBEG00000016082	RIF1	58	62.651	Tupaia_belangeri
ENSHBUG00000007125	rif1	69	52.899	ENSTTRG00000011190	RIF1	63	52.899	Tursiops_truncatus
ENSHBUG00000007125	rif1	55	54.902	ENSUAMG00000026385	RIF1	70	54.902	Ursus_americanus
ENSHBUG00000007125	rif1	66	54.902	ENSUMAG00000000337	RIF1	73	54.902	Ursus_maritimus
ENSHBUG00000007125	rif1	54	50.159	ENSVPAG00000002162	RIF1	62	44.886	Vicugna_pacos
ENSHBUG00000007125	rif1	59	47.024	ENSXETG00000004530	rif1	56	46.774	Xenopus_tropicalis
ENSHBUG00000007125	rif1	97	65.517	ENSXMAG00000000506	rif1	99	65.517	Xiphophorus_maculatus