EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000007301 (Gene tree)
Gene ID: 102309384
Gene Symbol: arl5c
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like protein 5C
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 4248 bases
Position: chrJH425366.1:2595209-2599456
Accession: 102309384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000005902	MMR_HSR1	PF01926.23	8.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000006217	-	2783	XM_005921906	ENSHBUP00000005902	179 (aa)	XP_005921968	UPI000329D6A9

Gene Model

Click here to download ENSHBUG00000007301's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000007301's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000007301	arl5c	98	45.763	ENSHBUG00000004652	-	98	45.763
ENSHBUG00000007301	arl5c	85	43.038	ENSHBUG00000005802	arl4d	79	43.038
ENSHBUG00000007301	arl5c	87	30.128	ENSHBUG00000014610	arl8bb	82	30.128
ENSHBUG00000007301	arl5c	98	44.068	ENSHBUG00000008546	arf5	98	44.068
ENSHBUG00000007301	arl5c	87	32.692	ENSHBUG00000000964	arl8a	81	32.692
ENSHBUG00000007301	arl5c	98	48.295	ENSHBUG00000002636	-	98	48.295
ENSHBUG00000007301	arl5c	87	30.818	ENSHBUG00000002201	arl8ba	58	30.818
ENSHBUG00000007301	arl5c	98	46.591	ENSHBUG00000008630	-	98	46.591
ENSHBUG00000007301	arl5c	88	30.000	ENSHBUG00000021221	sar1ab	76	30.000
ENSHBUG00000007301	arl5c	89	40.881	ENSHBUG00000023185	-	87	40.881
ENSHBUG00000007301	arl5c	99	42.135	ENSHBUG00000001250	-	99	42.135
ENSHBUG00000007301	arl5c	85	43.125	ENSHBUG00000002490	arl4cb	82	43.125
ENSHBUG00000007301	arl5c	98	72.571	ENSHBUG00000009050	arl8	100	73.780
ENSHBUG00000007301	arl5c	85	43.396	ENSHBUG00000007873	-	79	43.396
ENSHBUG00000007301	arl5c	89	41.509	ENSHBUG00000000803	arl3	87	41.509
ENSHBUG00000007301	arl5c	100	42.778	ENSHBUG00000011041	-	100	42.778
ENSHBUG00000007301	arl5c	62	30.172	ENSHBUG00000019261	si:dkey-16l2.16	55	30.172
ENSHBUG00000007301	arl5c	79	33.333	ENSHBUG00000018397	-	76	33.333
ENSHBUG00000007301	arl5c	89	40.719	ENSHBUG00000013721	-	83	40.719
ENSHBUG00000007301	arl5c	85	44.304	ENSHBUG00000012803	arl4aa	79	44.304
ENSHBUG00000007301	arl5c	98	46.328	ENSHBUG00000003654	arf2b	98	46.328
ENSHBUG00000007301	arl5c	98	70.455	ENSHBUG00000011659	arl5a	98	70.455
ENSHBUG00000007301	arl5c	98	45.763	ENSHBUG00000008446	arf3b	98	45.763
ENSHBUG00000007301	arl5c	97	43.820	ENSHBUG00000010636	arl1	98	43.820
ENSHBUG00000007301	arl5c	92	36.585	ENSHBUG00000002903	arl3l2	88	36.585
ENSHBUG00000007301	arl5c	86	38.365	ENSHBUG00000002695	ARL6	92	37.821
ENSHBUG00000007301	arl5c	97	39.106	ENSHBUG00000002834	-	96	39.106
ENSHBUG00000007301	arl5c	83	39.869	ENSHBUG00000001159	arl14	75	39.869
ENSHBUG00000007301	arl5c	89	39.759	ENSHBUG00000009561	-	86	39.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000007301	arl5c	100	89.944	ENSAPOG00000005821	arl5c	100	89.944	Acanthochromis_polyacanthus
ENSHBUG00000007301	arl5c	92	97.561	ENSACIG00000008975	arl5c	91	97.561	Amphilophus_citrinellus
ENSHBUG00000007301	arl5c	100	89.944	ENSAOCG00000010448	arl5c	100	89.944	Amphiprion_ocellaris
ENSHBUG00000007301	arl5c	100	89.944	ENSAPEG00000002699	arl5c	100	89.944	Amphiprion_percula
ENSHBUG00000007301	arl5c	100	87.151	ENSATEG00000000181	arl5c	100	87.151	Anabas_testudineus
ENSHBUG00000007301	arl5c	100	100.000	ENSACLG00000000922	arl5c	100	100.000	Astatotilapia_calliptera
ENSHBUG00000007301	arl5c	100	84.358	ENSAMXG00000031771	arl5c	100	84.358	Astyanax_mexicanus
ENSHBUG00000007301	arl5c	100	83.240	ENSCSEG00000009845	arl5c	100	83.240	Cynoglossus_semilaevis
ENSHBUG00000007301	arl5c	99	91.011	ENSCVAG00000012706	arl5c	99	91.011	Cyprinodon_variegatus
ENSHBUG00000007301	arl5c	100	84.358	ENSDARG00000035719	arl5c	100	84.358	Danio_rerio
ENSHBUG00000007301	arl5c	100	87.151	ENSELUG00000016864	arl5c	100	87.151	Esox_lucius
ENSHBUG00000007301	arl5c	100	91.061	ENSFHEG00000013677	arl5c	100	91.061	Fundulus_heteroclitus
ENSHBUG00000007301	arl5c	100	91.620	ENSGAFG00000002547	arl5c	100	91.620	Gambusia_affinis
ENSHBUG00000007301	arl5c	100	91.061	ENSGACG00000009321	arl5c	100	91.061	Gasterosteus_aculeatus
ENSHBUG00000007301	arl5c	100	82.682	ENSHCOG00000017576	-	100	82.682	Hippocampus_comes
ENSHBUG00000007301	arl5c	100	84.916	ENSIPUG00000023232	arl5c	100	84.916	Ictalurus_punctatus
ENSHBUG00000007301	arl5c	100	90.503	ENSKMAG00000011323	arl5c	100	90.503	Kryptolebias_marmoratus
ENSHBUG00000007301	arl5c	100	89.944	ENSLBEG00000006177	arl5c	86	89.944	Labrus_bergylta
ENSHBUG00000007301	arl5c	100	88.268	ENSMAMG00000022157	arl5c	100	88.268	Mastacembelus_armatus
ENSHBUG00000007301	arl5c	100	100.000	ENSMZEG00005022925	arl5c	100	100.000	Maylandia_zebra
ENSHBUG00000007301	arl5c	92	95.122	ENSMMOG00000020851	arl5c	96	95.122	Mola_mola
ENSHBUG00000007301	arl5c	92	90.244	ENSMALG00000009306	arl5c	93	90.244	Monopterus_albus
ENSHBUG00000007301	arl5c	100	99.441	ENSNBRG00000020245	arl5c	100	99.441	Neolamprologus_brichardi
ENSHBUG00000007301	arl5c	100	99.441	ENSONIG00000000890	arl5c	99	99.441	Oreochromis_niloticus
ENSHBUG00000007301	arl5c	100	84.358	ENSORLG00000002960	arl5c	100	84.756	Oryzias_latipes
ENSHBUG00000007301	arl5c	100	84.358	ENSORLG00020010074	arl5c	100	84.756	Oryzias_latipes_hni
ENSHBUG00000007301	arl5c	100	84.358	ENSORLG00015002752	arl5c	100	84.756	Oryzias_latipes_hsok
ENSHBUG00000007301	arl5c	97	86.127	ENSOMEG00000021718	arl5c	98	86.127	Oryzias_melastigma
ENSHBUG00000007301	arl5c	100	86.592	ENSPKIG00000021727	arl5c	100	86.592	Paramormyrops_kingsleyae
ENSHBUG00000007301	arl5c	100	92.737	ENSPFOG00000007842	arl5c	99	92.737	Poecilia_formosa
ENSHBUG00000007301	arl5c	100	92.179	ENSPLAG00000002394	arl5c	100	92.179	Poecilia_latipinna
ENSHBUG00000007301	arl5c	91	93.252	ENSPMEG00000000631	arl5c	94	93.252	Poecilia_mexicana
ENSHBUG00000007301	arl5c	100	93.296	ENSPREG00000008730	arl5c	100	93.296	Poecilia_reticulata
ENSHBUG00000007301	arl5c	100	100.000	ENSPNYG00000012720	arl5c	100	100.000	Pundamilia_nyererei
ENSHBUG00000007301	arl5c	100	83.799	ENSPNAG00000002310	arl5c	100	83.799	Pygocentrus_nattereri
ENSHBUG00000007301	arl5c	100	85.475	ENSSFOG00015023529	arl5c	100	85.475	Scleropages_formosus
ENSHBUG00000007301	arl5c	100	89.944	ENSSMAG00000010552	arl5c	100	89.944	Scophthalmus_maximus
ENSHBUG00000007301	arl5c	100	87.709	ENSSDUG00000022640	arl5c	100	87.709	Seriola_dumerili
ENSHBUG00000007301	arl5c	100	87.709	ENSSLDG00000000728	arl5c	100	87.709	Seriola_lalandi_dorsalis
ENSHBUG00000007301	arl5c	100	89.385	ENSSPAG00000007687	arl5c	100	89.385	Stegastes_partitus
ENSHBUG00000007301	arl5c	100	91.061	ENSTRUG00000022814	arl5c	100	91.061	Takifugu_rubripes
ENSHBUG00000007301	arl5c	100	88.827	ENSTNIG00000003015	arl5c	99	88.827	Tetraodon_nigroviridis
ENSHBUG00000007301	arl5c	99	93.258	ENSXCOG00000017380	arl5c	99	93.258	Xiphophorus_couchianus
ENSHBUG00000007301	arl5c	99	92.697	ENSXMAG00000008447	arl5c	99	92.697	Xiphophorus_maculatus