EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000007309 (Gene tree)
Gene ID: -
Gene Symbol: hfm1
Alias: si:ch211-83f14.5
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 15223 bases
Position: chrJH425587.1:461543-476765
Accession: 102313814
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000005833	ResIII	PF04851.15	5.9e-12	1	1
ENSHBUP00000005833	DEAD	PF00270.29	1.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000006325	-	3153	XM_014339098	ENSHBUP00000005833	1050 (aa)	XP_014194584	-

Gene Model

Click here to download ENSHBUG00000007309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000007309's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000007309	hfm1	64	36.522	ENSHBUG00000015110	ascc3	56	36.522
ENSHBUG00000007309	hfm1	72	32.100	ENSHBUG00000011322	snrnp200	71	32.100

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000007309	hfm1	96	59.962	ENSG00000162669	HFM1	65	64.807	Homo_sapiens
ENSHBUG00000007309	hfm1	83	86.476	ENSAPOG00000005304	hfm1	96	86.476	Acanthochromis_polyacanthus
ENSHBUG00000007309	hfm1	97	59.528	ENSAMEG00000000432	HFM1	64	64.876	Ailuropoda_melanoleuca
ENSHBUG00000007309	hfm1	98	85.439	ENSACIG00000021553	hfm1	95	85.439	Amphilophus_citrinellus
ENSHBUG00000007309	hfm1	79	84.727	ENSAOCG00000022839	hfm1	96	87.121	Amphiprion_ocellaris
ENSHBUG00000007309	hfm1	79	84.485	ENSAPEG00000014316	hfm1	96	87.595	Amphiprion_percula
ENSHBUG00000007309	hfm1	97	74.686	ENSATEG00000019181	hfm1	93	73.654	Anabas_testudineus
ENSHBUG00000007309	hfm1	95	61.785	ENSAPLG00000013639	HFM1	65	65.625	Anas_platyrhynchos
ENSHBUG00000007309	hfm1	97	60.135	ENSANAG00000029513	HFM1	72	59.942	Aotus_nancymaae
ENSHBUG00000007309	hfm1	100	98.286	ENSACLG00000009033	hfm1	100	98.286	Astatotilapia_calliptera
ENSHBUG00000007309	hfm1	87	71.564	ENSAMXG00000006108	hfm1	66	71.564	Astyanax_mexicanus
ENSHBUG00000007309	hfm1	97	60.301	ENSBTAG00000020856	HFM1	70	61.531	Bos_taurus
ENSHBUG00000007309	hfm1	96	59.676	ENSCJAG00000001843	HFM1	65	64.592	Callithrix_jacchus
ENSHBUG00000007309	hfm1	96	59.733	ENSCAFG00000020187	HFM1	64	64.662	Canis_familiaris
ENSHBUG00000007309	hfm1	97	59.981	ENSTSYG00000014250	HFM1	65	64.952	Carlito_syrichta
ENSHBUG00000007309	hfm1	97	59.249	ENSCPOG00000007421	HFM1	66	64.530	Cavia_porcellus
ENSHBUG00000007309	hfm1	96	59.581	ENSCCAG00000033206	HFM1	65	64.270	Cebus_capucinus
ENSHBUG00000007309	hfm1	96	59.676	ENSCATG00000030987	HFM1	65	64.592	Cercocebus_atys
ENSHBUG00000007309	hfm1	96	57.525	ENSCLAG00000005173	HFM1	63	63.627	Chinchilla_lanigera
ENSHBUG00000007309	hfm1	66	52.925	ENSCSAVG00000005094	-	100	52.925	Ciona_savignyi
ENSHBUG00000007309	hfm1	92	57.472	ENSCGRG00001016995	Hfm1	65	60.726	Cricetulus_griseus_chok1gshd
ENSHBUG00000007309	hfm1	95	59.549	ENSCGRG00000017181	Hfm1	70	59.020	Cricetulus_griseus_crigri
ENSHBUG00000007309	hfm1	98	72.505	ENSCSEG00000017659	hfm1	96	72.411	Cynoglossus_semilaevis
ENSHBUG00000007309	hfm1	68	82.278	ENSCVAG00000005075	hfm1	86	82.278	Cyprinodon_variegatus
ENSHBUG00000007309	hfm1	79	71.584	ENSDARG00000104288	hfm1	75	71.584	Danio_rerio
ENSHBUG00000007309	hfm1	96	57.972	ENSDNOG00000004776	HFM1	62	64.263	Dasypus_novemcinctus
ENSHBUG00000007309	hfm1	95	58.412	ENSDORG00000014661	Hfm1	65	62.316	Dipodomys_ordii
ENSHBUG00000007309	hfm1	93	60.600	ENSEASG00005015424	HFM1	87	64.989	Equus_asinus_asinus
ENSHBUG00000007309	hfm1	98	57.895	ENSECAG00000024039	HFM1	63	64.630	Equus_caballus
ENSHBUG00000007309	hfm1	84	74.945	ENSELUG00000018944	hfm1	97	74.945	Esox_lucius
ENSHBUG00000007309	hfm1	95	60.405	ENSFCAG00000029116	HFM1	69	60.627	Felis_catus
ENSHBUG00000007309	hfm1	86	65.372	ENSFALG00000001781	HFM1	65	65.372	Ficedula_albicollis
ENSHBUG00000007309	hfm1	94	59.643	ENSFDAG00000020816	HFM1	62	64.737	Fukomys_damarensis
ENSHBUG00000007309	hfm1	86	70.374	ENSGMOG00000017436	hfm1	97	70.374	Gadus_morhua
ENSHBUG00000007309	hfm1	97	75.681	ENSGAFG00000018093	hfm1	99	75.681	Gambusia_affinis
ENSHBUG00000007309	hfm1	87	76.720	ENSGACG00000015686	hfm1	98	76.720	Gasterosteus_aculeatus
ENSHBUG00000007309	hfm1	96	59.867	ENSGGOG00000038524	HFM1	65	64.700	Gorilla_gorilla
ENSHBUG00000007309	hfm1	78	77.697	ENSHCOG00000019632	hfm1	98	77.697	Hippocampus_comes
ENSHBUG00000007309	hfm1	88	70.032	ENSIPUG00000017020	hfm1	90	72.310	Ictalurus_punctatus
ENSHBUG00000007309	hfm1	86	62.808	ENSJJAG00000017198	Hfm1	66	62.808	Jaculus_jaculus
ENSHBUG00000007309	hfm1	83	80.000	ENSKMAG00000002282	hfm1	91	80.000	Kryptolebias_marmoratus
ENSHBUG00000007309	hfm1	98	75.411	ENSLBEG00000006759	hfm1	95	81.084	Labrus_bergylta
ENSHBUG00000007309	hfm1	86	66.667	ENSLACG00000010698	HFM1	89	66.455	Latimeria_chalumnae
ENSHBUG00000007309	hfm1	94	65.096	ENSLOCG00000004931	hfm1	86	69.394	Lepisosteus_oculatus
ENSHBUG00000007309	hfm1	64	70.299	ENSLAFG00000015903	-	90	70.299	Loxodonta_africana
ENSHBUG00000007309	hfm1	97	56.468	ENSMFAG00000003649	HFM1	65	61.087	Macaca_fascicularis
ENSHBUG00000007309	hfm1	96	59.390	ENSMMUG00000006819	HFM1	65	64.163	Macaca_mulatta
ENSHBUG00000007309	hfm1	83	81.393	ENSMAMG00000004623	hfm1	98	82.198	Mastacembelus_armatus
ENSHBUG00000007309	hfm1	99	98.264	ENSMZEG00005004679	hfm1	99	98.264	Maylandia_zebra
ENSHBUG00000007309	hfm1	72	68.504	ENSMGAG00000008437	HFM1	95	68.504	Meleagris_gallopavo
ENSHBUG00000007309	hfm1	96	59.360	ENSMAUG00000018858	Hfm1	65	63.158	Mesocricetus_auratus
ENSHBUG00000007309	hfm1	97	59.357	ENSMICG00000037935	HFM1	65	64.309	Microcebus_murinus
ENSHBUG00000007309	hfm1	95	59.510	ENSMOCG00000014812	Hfm1	65	63.050	Microtus_ochrogaster
ENSHBUG00000007309	hfm1	83	81.029	ENSMMOG00000006148	hfm1	95	81.029	Mola_mola
ENSHBUG00000007309	hfm1	97	77.454	ENSMALG00000002401	hfm1	94	83.333	Monopterus_albus
ENSHBUG00000007309	hfm1	88	73.504	MGP_CAROLIEiJ_G0027496	Hfm1	60	73.504	Mus_caroli
ENSHBUG00000007309	hfm1	95	58.892	ENSMUSG00000043410	Hfm1	65	62.446	Mus_musculus
ENSHBUG00000007309	hfm1	97	58.318	MGP_PahariEiJ_G0017268	Hfm1	70	59.566	Mus_pahari
ENSHBUG00000007309	hfm1	95	59.630	MGP_SPRETEiJ_G0028495	Hfm1	70	59.763	Mus_spretus
ENSHBUG00000007309	hfm1	96	58.079	ENSMPUG00000004594	HFM1	63	64.523	Mustela_putorius_furo
ENSHBUG00000007309	hfm1	95	60.348	ENSMLUG00000010200	HFM1	64	64.485	Myotis_lucifugus
ENSHBUG00000007309	hfm1	100	91.572	ENSNBRG00000002910	hfm1	100	91.572	Neolamprologus_brichardi
ENSHBUG00000007309	hfm1	96	57.375	ENSNLEG00000010285	HFM1	62	63.606	Nomascus_leucogenys
ENSHBUG00000007309	hfm1	87	58.883	ENSMEUG00000015788	HFM1	59	58.883	Notamacropus_eugenii
ENSHBUG00000007309	hfm1	79	62.107	ENSOPRG00000013916	HFM1	58	62.107	Ochotona_princeps
ENSHBUG00000007309	hfm1	94	86.013	ENSONIG00000010590	hfm1	98	86.013	Oreochromis_niloticus
ENSHBUG00000007309	hfm1	77	80.074	ENSORLG00000026844	hfm1	99	80.172	Oryzias_latipes
ENSHBUG00000007309	hfm1	80	91.327	ENSORLG00020002951	hfm1	74	91.327	Oryzias_latipes_hni
ENSHBUG00000007309	hfm1	95	71.536	ENSOMEG00000016474	hfm1	65	77.682	Oryzias_melastigma
ENSHBUG00000007309	hfm1	86	64.775	ENSOGAG00000032369	HFM1	76	64.775	Otolemur_garnettii
ENSHBUG00000007309	hfm1	97	60.132	ENSOARG00000015812	HFM1	70	61.455	Ovis_aries
ENSHBUG00000007309	hfm1	97	60.019	ENSPPAG00000024582	HFM1	70	65.021	Pan_paniscus
ENSHBUG00000007309	hfm1	95	60.562	ENSPPRG00000003270	HFM1	64	64.592	Panthera_pardus
ENSHBUG00000007309	hfm1	95	60.659	ENSPTIG00000018881	HFM1	64	64.700	Panthera_tigris_altaica
ENSHBUG00000007309	hfm1	96	60.057	ENSPTRG00000000948	HFM1	65	64.914	Pan_troglodytes
ENSHBUG00000007309	hfm1	97	59.259	ENSPANG00000009838	HFM1	65	64.270	Papio_anubis
ENSHBUG00000007309	hfm1	95	64.145	ENSPKIG00000003810	hfm1	94	70.936	Paramormyrops_kingsleyae
ENSHBUG00000007309	hfm1	79	77.091	ENSPMGG00000011059	hfm1	99	77.091	Periophthalmus_magnuspinnatus
ENSHBUG00000007309	hfm1	95	59.436	ENSPEMG00000022852	Hfm1	65	63.158	Peromyscus_maniculatus_bairdii
ENSHBUG00000007309	hfm1	86	64.461	ENSPCIG00000014233	HFM1	63	64.461	Phascolarctos_cinereus
ENSHBUG00000007309	hfm1	95	73.859	ENSPFOG00000017194	hfm1	99	74.049	Poecilia_formosa
ENSHBUG00000007309	hfm1	97	74.976	ENSPLAG00000000571	hfm1	94	74.976	Poecilia_latipinna
ENSHBUG00000007309	hfm1	97	75.477	ENSPMEG00000019475	hfm1	95	75.477	Poecilia_mexicana
ENSHBUG00000007309	hfm1	97	74.452	ENSPREG00000007803	hfm1	97	74.452	Poecilia_reticulata
ENSHBUG00000007309	hfm1	97	59.924	ENSPPYG00000001163	HFM1	70	60.985	Pongo_abelii
ENSHBUG00000007309	hfm1	86	58.565	ENSPVAG00000009713	HFM1	66	58.565	Pteropus_vampyrus
ENSHBUG00000007309	hfm1	100	98.095	ENSPNYG00000001795	hfm1	100	98.095	Pundamilia_nyererei
ENSHBUG00000007309	hfm1	79	73.156	ENSPNAG00000010865	hfm1	82	73.156	Pygocentrus_nattereri
ENSHBUG00000007309	hfm1	97	57.801	ENSRNOG00000023299	Hfm1	70	59.020	Rattus_norvegicus
ENSHBUG00000007309	hfm1	97	59.734	ENSRROG00000045569	HFM1	70	60.887	Rhinopithecus_roxellana
ENSHBUG00000007309	hfm1	86	64.485	ENSSBOG00000027456	HFM1	66	64.485	Saimiri_boliviensis_boliviensis
ENSHBUG00000007309	hfm1	56	69.595	ENSSHAG00000014616	-	67	69.595	Sarcophilus_harrisii
ENSHBUG00000007309	hfm1	86	70.168	ENSSFOG00015020129	hfm1	63	70.168	Scleropages_formosus
ENSHBUG00000007309	hfm1	84	82.962	ENSSMAG00000006907	hfm1	88	82.962	Scophthalmus_maximus
ENSHBUG00000007309	hfm1	79	83.515	ENSSDUG00000011424	hfm1	93	83.515	Seriola_dumerili
ENSHBUG00000007309	hfm1	79	83.656	ENSSLDG00000016386	hfm1	92	83.656	Seriola_lalandi_dorsalis
ENSHBUG00000007309	hfm1	94	75.551	ENSSPAG00000001023	hfm1	93	83.879	Stegastes_partitus
ENSHBUG00000007309	hfm1	96	59.057	ENSSSCG00000006912	HFM1	68	64.378	Sus_scrofa
ENSHBUG00000007309	hfm1	86	65.203	ENSTGUG00000006172	HFM1	97	65.203	Taeniopygia_guttata
ENSHBUG00000007309	hfm1	96	60.366	ENSTTRG00000013933	HFM1	71	60.870	Tursiops_truncatus
ENSHBUG00000007309	hfm1	95	58.430	ENSVPAG00000011331	HFM1	65	62.379	Vicugna_pacos
ENSHBUG00000007309	hfm1	95	59.335	ENSVVUG00000020760	HFM1	88	65.062	Vulpes_vulpes
ENSHBUG00000007309	hfm1	77	80.911	ENSXMAG00000004178	hfm1	90	80.911	Xiphophorus_maculatus