EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000007389 (Gene tree)
Gene ID: 102309565
Gene Symbol: gfi1aa
Alias: gfi1.1|gfi1a|zgc:113277
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 2287 bases
Position: chrJH425587.1:429059-431345
Accession: 102309565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000005987	zf-C2H2	PF00096.26	1.9e-23	1	5
ENSHBUP00000005987	zf-C2H2	PF00096.26	1.9e-23	2	5
ENSHBUP00000005987	zf-C2H2	PF00096.26	1.9e-23	3	5
ENSHBUP00000005987	zf-C2H2	PF00096.26	1.9e-23	4	5
ENSHBUP00000005987	zf-C2H2	PF00096.26	1.9e-23	5	5
ENSHBUP00000005987	zf-met	PF12874.7	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000006080	-	1155	XM_005939352	ENSHBUP00000005987	384 (aa)	XP_005939414	-

Gene Model

Click here to download ENSHBUG00000007389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000007389's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000007389	gfi1aa	55	43.195	ENSHBUG00000006250	-	89	43.195
ENSHBUG00000007389	gfi1aa	58	43.119	ENSHBUG00000018885	-	57	43.119
ENSHBUG00000007389	gfi1aa	50	38.686	ENSHBUG00000016384	-	84	38.686
ENSHBUG00000007389	gfi1aa	65	40.000	ENSHBUG00000003449	-	90	40.000
ENSHBUG00000007389	gfi1aa	63	42.262	ENSHBUG00000013292	-	70	42.262
ENSHBUG00000007389	gfi1aa	58	35.106	ENSHBUG00000004077	-	94	41.121
ENSHBUG00000007389	gfi1aa	100	63.683	ENSHBUG00000011969	gfi1ab	100	63.333
ENSHBUG00000007389	gfi1aa	67	46.552	ENSHBUG00000009837	znf236	59	46.552
ENSHBUG00000007389	gfi1aa	67	40.000	ENSHBUG00000004840	znf646	50	40.000
ENSHBUG00000007389	gfi1aa	77	41.727	ENSHBUG00000015393	-	82	41.727
ENSHBUG00000007389	gfi1aa	51	44.970	ENSHBUG00000014725	-	85	44.970
ENSHBUG00000007389	gfi1aa	51	51.515	ENSHBUG00000003057	-	91	51.515
ENSHBUG00000007389	gfi1aa	64	42.012	ENSHBUG00000004718	-	98	44.048
ENSHBUG00000007389	gfi1aa	74	42.857	ENSHBUG00000001075	-	93	44.444
ENSHBUG00000007389	gfi1aa	60	43.972	ENSHBUG00000013490	-	74	43.972
ENSHBUG00000007389	gfi1aa	63	44.681	ENSHBUG00000013518	-	97	44.681
ENSHBUG00000007389	gfi1aa	53	46.386	ENSHBUG00000012565	-	96	46.386
ENSHBUG00000007389	gfi1aa	56	41.071	ENSHBUG00000006662	-	74	43.925
ENSHBUG00000007389	gfi1aa	63	36.441	ENSHBUG00000007764	snai2	68	36.441
ENSHBUG00000007389	gfi1aa	51	42.254	ENSHBUG00000017372	-	90	42.254
ENSHBUG00000007389	gfi1aa	52	41.912	ENSHBUG00000009815	znf319b	88	41.912
ENSHBUG00000007389	gfi1aa	63	44.643	ENSHBUG00000012984	-	89	44.643
ENSHBUG00000007389	gfi1aa	62	41.176	ENSHBUG00000019090	ZNF319	94	41.176
ENSHBUG00000007389	gfi1aa	55	37.956	ENSHBUG00000013194	-	96	38.650
ENSHBUG00000007389	gfi1aa	55	41.892	ENSHBUG00000015404	-	69	41.892
ENSHBUG00000007389	gfi1aa	51	41.615	ENSHBUG00000006238	-	94	41.615
ENSHBUG00000007389	gfi1aa	51	44.379	ENSHBUG00000012758	-	85	44.379

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000007389	gfi1aa	100	86.967	ENSAPOG00000005043	gfi1aa	100	86.967	Acanthochromis_polyacanthus
ENSHBUG00000007389	gfi1aa	100	91.049	ENSACIG00000021378	gfi1aa	100	91.049	Amphilophus_citrinellus
ENSHBUG00000007389	gfi1aa	100	85.965	ENSAOCG00000022957	gfi1aa	100	85.965	Amphiprion_ocellaris
ENSHBUG00000007389	gfi1aa	100	86.305	ENSAPEG00000014539	gfi1aa	100	86.305	Amphiprion_percula
ENSHBUG00000007389	gfi1aa	100	81.500	ENSATEG00000019026	gfi1aa	100	87.018	Anabas_testudineus
ENSHBUG00000007389	gfi1aa	100	95.970	ENSACLG00000008641	gfi1aa	100	95.970	Astatotilapia_calliptera
ENSHBUG00000007389	gfi1aa	100	63.636	ENSDARG00000020746	gfi1aa	100	63.636	Danio_rerio
ENSHBUG00000007389	gfi1aa	100	76.709	ENSKMAG00000002148	gfi1aa	100	76.962	Kryptolebias_marmoratus
ENSHBUG00000007389	gfi1aa	100	77.889	ENSLBEG00000006603	gfi1aa	100	77.889	Labrus_bergylta
ENSHBUG00000007389	gfi1aa	100	79.345	ENSMAMG00000004896	gfi1aa	100	79.597	Mastacembelus_armatus
ENSHBUG00000007389	gfi1aa	100	95.970	ENSMZEG00005004578	gfi1aa	100	95.970	Maylandia_zebra
ENSHBUG00000007389	gfi1aa	100	65.116	ENSMMOG00000006167	gfi1aa	99	77.891	Mola_mola
ENSHBUG00000007389	gfi1aa	100	95.718	ENSNBRG00000002673	gfi1aa	100	95.718	Neolamprologus_brichardi
ENSHBUG00000007389	gfi1aa	100	95.707	ENSPNYG00000002189	gfi1aa	100	95.707	Pundamilia_nyererei
ENSHBUG00000007389	gfi1aa	100	78.960	ENSSMAG00000006797	gfi1aa	100	79.455	Scophthalmus_maximus
ENSHBUG00000007389	gfi1aa	100	83.333	ENSSDUG00000011654	gfi1aa	100	83.333	Seriola_dumerili
ENSHBUG00000007389	gfi1aa	100	85.604	ENSSLDG00000016512	gfi1aa	100	85.604	Seriola_lalandi_dorsalis
ENSHBUG00000007389	gfi1aa	85	83.284	ENSSPAG00000000927	gfi1aa	94	83.578	Stegastes_partitus
ENSHBUG00000007389	gfi1aa	100	76.808	ENSTRUG00000004744	gfi1aa	100	76.808	Takifugu_rubripes