EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000007464 (Gene tree)
Gene ID: 102307948
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 20995 bases
Position: chrJH425374.1:902052-923046
Accession: 102307948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000006001	ResIII	PF04851.15	4.1e-11	1	1
ENSHBUP00000025423	ResIII	PF04851.15	5.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000006044	-	2661	-	ENSHBUP00000006001	886 (aa)	-	-
ENSHBUT00000006006	-	4014	XM_005922979	ENSHBUP00000025423	994 (aa)	XP_005923041	-

Gene Model

Click here to download ENSHBUG00000007464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000007464's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000007464	chd1l	51	31.953	ENSHBUG00000016017	rad54b	53	32.485
ENSHBUG00000007464	chd1l	51	38.704	ENSHBUG00000010270	hells	67	38.462
ENSHBUG00000007464	chd1l	51	31.062	ENSHBUG00000007793	rad54l	71	30.709

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000007464	chd1l	96	64.452	ENSG00000131778	CHD1L	99	64.401	Homo_sapiens
ENSHBUG00000007464	chd1l	99	86.508	ENSAPOG00000001539	chd1l	99	88.684	Acanthochromis_polyacanthus
ENSHBUG00000007464	chd1l	97	64.781	ENSAMEG00000017063	CHD1L	97	64.123	Ailuropoda_melanoleuca
ENSHBUG00000007464	chd1l	98	89.852	ENSACIG00000001164	chd1l	100	90.080	Amphilophus_citrinellus
ENSHBUG00000007464	chd1l	98	86.912	ENSAOCG00000014510	chd1l	93	87.447	Amphiprion_ocellaris
ENSHBUG00000007464	chd1l	98	83.793	ENSAPEG00000017450	chd1l	95	85.896	Amphiprion_percula
ENSHBUG00000007464	chd1l	98	82.857	ENSAPEG00000017573	chd1l	95	85.138	Amphiprion_percula
ENSHBUG00000007464	chd1l	98	85.189	ENSATEG00000013058	chd1l	94	85.220	Anabas_testudineus
ENSHBUG00000007464	chd1l	95	63.176	ENSAPLG00000009976	CHD1L	95	63.657	Anas_platyrhynchos
ENSHBUG00000007464	chd1l	96	61.477	ENSACAG00000017686	CHD1L	98	61.409	Anolis_carolinensis
ENSHBUG00000007464	chd1l	96	64.294	ENSANAG00000024347	CHD1L	97	63.512	Aotus_nancymaae
ENSHBUG00000007464	chd1l	100	99.396	ENSACLG00000019304	chd1l	100	99.396	Astatotilapia_calliptera
ENSHBUG00000007464	chd1l	98	64.605	ENSAMXG00000012367	chd1l	95	62.971	Astyanax_mexicanus
ENSHBUG00000007464	chd1l	98	64.564	ENSBTAG00000020831	CHD1L	97	64.652	Bos_taurus
ENSHBUG00000007464	chd1l	96	63.889	ENSCJAG00000002406	CHD1L	97	63.152	Callithrix_jacchus
ENSHBUG00000007464	chd1l	98	61.187	ENSCAFG00000010944	CHD1L	98	61.036	Canis_familiaris
ENSHBUG00000007464	chd1l	98	63.242	ENSCAFG00020020121	CHD1L	99	63.063	Canis_lupus_dingo
ENSHBUG00000007464	chd1l	98	64.679	ENSCHIG00000013871	CHD1L	97	64.840	Capra_hircus
ENSHBUG00000007464	chd1l	94	65.083	ENSTSYG00000003005	CHD1L	99	64.211	Carlito_syrichta
ENSHBUG00000007464	chd1l	96	62.269	ENSCPOG00000009000	CHD1L	98	61.294	Cavia_porcellus
ENSHBUG00000007464	chd1l	96	61.921	ENSCCAG00000036079	CHD1L	97	61.224	Cebus_capucinus
ENSHBUG00000007464	chd1l	96	64.352	ENSCATG00000031044	CHD1L	97	63.854	Cercocebus_atys
ENSHBUG00000007464	chd1l	96	64.186	ENSCLAG00000000880	CHD1L	97	64.343	Chinchilla_lanigera
ENSHBUG00000007464	chd1l	96	64.583	ENSCSAG00000018386	CHD1L	97	64.082	Chlorocebus_sabaeus
ENSHBUG00000007464	chd1l	96	64.877	ENSCPBG00000002600	CHD1L	97	65.098	Chrysemys_picta_bellii
ENSHBUG00000007464	chd1l	97	63.116	ENSCANG00000020239	CHD1L	97	62.942	Colobus_angolensis_palliatus
ENSHBUG00000007464	chd1l	98	63.451	ENSCGRG00001021624	Chd1l	99	63.412	Cricetulus_griseus_chok1gshd
ENSHBUG00000007464	chd1l	94	64.463	ENSCGRG00000007554	Chd1l	100	64.411	Cricetulus_griseus_crigri
ENSHBUG00000007464	chd1l	98	80.527	ENSCVAG00000002595	chd1l	98	79.588	Cyprinodon_variegatus
ENSHBUG00000007464	chd1l	98	73.570	ENSDARG00000015471	chd1l	94	70.954	Danio_rerio
ENSHBUG00000007464	chd1l	99	63.626	ENSDNOG00000019504	CHD1L	97	64.196	Dasypus_novemcinctus
ENSHBUG00000007464	chd1l	96	63.499	ENSDORG00000013555	Chd1l	97	63.626	Dipodomys_ordii
ENSHBUG00000007464	chd1l	90	60.915	ENSETEG00000008445	CHD1L	88	61.268	Echinops_telfairi
ENSHBUG00000007464	chd1l	67	76.087	ENSEBUG00000005791	chd1l	79	76.087	Eptatretus_burgeri
ENSHBUG00000007464	chd1l	98	63.895	ENSEASG00005007364	CHD1L	100	64.493	Equus_asinus_asinus
ENSHBUG00000007464	chd1l	98	63.781	ENSECAG00000008915	CHD1L	100	64.372	Equus_caballus
ENSHBUG00000007464	chd1l	98	61.320	ENSELUG00000016844	chd1l	93	60.722	Esox_lucius
ENSHBUG00000007464	chd1l	96	64.061	ENSFCAG00000007777	CHD1L	97	63.379	Felis_catus
ENSHBUG00000007464	chd1l	97	60.641	ENSFALG00000006087	CHD1L	96	61.986	Ficedula_albicollis
ENSHBUG00000007464	chd1l	94	64.692	ENSFDAG00000012431	CHD1L	99	63.944	Fukomys_damarensis
ENSHBUG00000007464	chd1l	98	81.515	ENSFHEG00000012420	chd1l	94	81.474	Fundulus_heteroclitus
ENSHBUG00000007464	chd1l	96	63.268	ENSGALG00000015038	CHD1L	96	63.387	Gallus_gallus
ENSHBUG00000007464	chd1l	98	81.456	ENSGAFG00000018198	chd1l	99	78.670	Gambusia_affinis
ENSHBUG00000007464	chd1l	57	83.757	ENSGACG00000014042	chd1l	98	84.344	Gasterosteus_aculeatus
ENSHBUG00000007464	chd1l	97	64.971	ENSGAGG00000014432	CHD1L	97	64.509	Gopherus_agassizii
ENSHBUG00000007464	chd1l	97	62.887	ENSGGOG00000001067	CHD1L	98	62.415	Gorilla_gorilla
ENSHBUG00000007464	chd1l	96	63.079	ENSHGLG00000008933	CHD1L	98	62.132	Heterocephalus_glaber_female
ENSHBUG00000007464	chd1l	94	62.114	ENSHGLG00100007155	CHD1L	100	61.279	Heterocephalus_glaber_male
ENSHBUG00000007464	chd1l	98	75.199	ENSHCOG00000012787	chd1l	94	77.011	Hippocampus_comes
ENSHBUG00000007464	chd1l	98	68.457	ENSIPUG00000022617	chd1l	94	66.046	Ictalurus_punctatus
ENSHBUG00000007464	chd1l	96	59.790	ENSSTOG00000007032	CHD1L	98	58.910	Ictidomys_tridecemlineatus
ENSHBUG00000007464	chd1l	98	83.601	ENSKMAG00000014358	chd1l	93	83.158	Kryptolebias_marmoratus
ENSHBUG00000007464	chd1l	98	80.778	ENSLBEG00000023845	chd1l	98	80.664	Labrus_bergylta
ENSHBUG00000007464	chd1l	97	60.613	ENSLACG00000006262	CHD1L	93	59.519	Latimeria_chalumnae
ENSHBUG00000007464	chd1l	98	72.540	ENSLOCG00000010574	chd1l	93	70.781	Lepisosteus_oculatus
ENSHBUG00000007464	chd1l	96	64.186	ENSLAFG00000018136	CHD1L	100	64.111	Loxodonta_africana
ENSHBUG00000007464	chd1l	94	63.991	ENSMFAG00000043562	CHD1L	99	64.251	Macaca_fascicularis
ENSHBUG00000007464	chd1l	96	64.468	ENSMMUG00000009024	CHD1L	97	63.968	Macaca_mulatta
ENSHBUG00000007464	chd1l	96	64.468	ENSMNEG00000039905	CHD1L	97	63.968	Macaca_nemestrina
ENSHBUG00000007464	chd1l	96	64.468	ENSMLEG00000030900	CHD1L	97	63.968	Mandrillus_leucophaeus
ENSHBUG00000007464	chd1l	98	83.447	ENSMAMG00000012822	chd1l	99	83.103	Mastacembelus_armatus
ENSHBUG00000007464	chd1l	100	99.396	ENSMZEG00005020830	chd1l	100	99.396	Maylandia_zebra
ENSHBUG00000007464	chd1l	94	63.294	ENSMGAG00000014304	CHD1L	99	63.879	Meleagris_gallopavo
ENSHBUG00000007464	chd1l	96	64.617	ENSMICG00000002497	CHD1L	96	64.994	Microcebus_murinus
ENSHBUG00000007464	chd1l	97	64.977	ENSMOCG00000006305	Chd1l	98	64.512	Microtus_ochrogaster
ENSHBUG00000007464	chd1l	98	75.629	ENSMMOG00000005964	chd1l	91	75.858	Mola_mola
ENSHBUG00000007464	chd1l	98	63.224	ENSMODG00000018717	CHD1L	99	62.612	Monodelphis_domestica
ENSHBUG00000007464	chd1l	98	84.862	ENSMALG00000014675	chd1l	93	85.263	Monopterus_albus
ENSHBUG00000007464	chd1l	96	64.849	MGP_CAROLIEiJ_G0025401	Chd1l	98	64.760	Mus_caroli
ENSHBUG00000007464	chd1l	96	64.665	ENSMUSG00000028089	Chd1l	98	64.465	Mus_musculus
ENSHBUG00000007464	chd1l	96	65.046	MGP_PahariEiJ_G0026845	Chd1l	98	64.733	Mus_pahari
ENSHBUG00000007464	chd1l	96	64.849	MGP_SPRETEiJ_G0026347	Chd1l	98	64.531	Mus_spretus
ENSHBUG00000007464	chd1l	98	63.523	ENSMPUG00000000615	CHD1L	97	63.832	Mustela_putorius_furo
ENSHBUG00000007464	chd1l	96	63.499	ENSMLUG00000007573	CHD1L	96	62.050	Myotis_lucifugus
ENSHBUG00000007464	chd1l	96	60.046	ENSNGAG00000000908	Chd1l	99	59.862	Nannospalax_galili
ENSHBUG00000007464	chd1l	98	92.906	ENSNBRG00000006021	chd1l	95	93.226	Neolamprologus_brichardi
ENSHBUG00000007464	chd1l	96	63.657	ENSNLEG00000000179	CHD1L	97	63.056	Nomascus_leucogenys
ENSHBUG00000007464	chd1l	87	64.381	ENSOPRG00000006973	CHD1L	93	64.381	Ochotona_princeps
ENSHBUG00000007464	chd1l	96	59.907	ENSODEG00000002494	CHD1L	97	59.795	Octodon_degus
ENSHBUG00000007464	chd1l	99	97.660	ENSONIG00000003183	chd1l	99	97.660	Oreochromis_niloticus
ENSHBUG00000007464	chd1l	86	62.308	ENSOANG00000003068	CHD1L	92	62.887	Ornithorhynchus_anatinus
ENSHBUG00000007464	chd1l	96	61.268	ENSOCUG00000009336	CHD1L	97	60.619	Oryctolagus_cuniculus
ENSHBUG00000007464	chd1l	98	79.104	ENSORLG00000003673	chd1l	95	79.215	Oryzias_latipes
ENSHBUG00000007464	chd1l	98	79.449	ENSORLG00020005123	chd1l	99	80.870	Oryzias_latipes_hni
ENSHBUG00000007464	chd1l	98	79.104	ENSORLG00015001680	chd1l	99	78.271	Oryzias_latipes_hsok
ENSHBUG00000007464	chd1l	76	78.817	ENSOMEG00000006109	chd1l	88	78.571	Oryzias_melastigma
ENSHBUG00000007464	chd1l	99	62.783	ENSOGAG00000008775	CHD1L	97	63.429	Otolemur_garnettii
ENSHBUG00000007464	chd1l	99	63.986	ENSOARG00000020547	CHD1L	99	65.041	Ovis_aries
ENSHBUG00000007464	chd1l	96	63.594	ENSPPAG00000039193	CHD1L	99	63.923	Pan_paniscus
ENSHBUG00000007464	chd1l	96	64.685	ENSPPRG00000010258	CHD1L	97	63.832	Panthera_pardus
ENSHBUG00000007464	chd1l	96	64.336	ENSPTRG00000001220	CHD1L	97	63.409	Pan_troglodytes
ENSHBUG00000007464	chd1l	96	64.527	ENSPANG00000009170	CHD1L	97	63.854	Papio_anubis
ENSHBUG00000007464	chd1l	98	71.789	ENSPKIG00000022166	chd1l	97	71.860	Paramormyrops_kingsleyae
ENSHBUG00000007464	chd1l	96	65.035	ENSPSIG00000012595	CHD1L	96	64.269	Pelodiscus_sinensis
ENSHBUG00000007464	chd1l	97	62.989	ENSPEMG00000013528	Chd1l	98	62.585	Peromyscus_maniculatus_bairdii
ENSHBUG00000007464	chd1l	91	64.172	ENSPCIG00000030409	CHD1L	99	63.702	Phascolarctos_cinereus
ENSHBUG00000007464	chd1l	98	80.502	ENSPFOG00000015948	chd1l	94	80.753	Poecilia_formosa
ENSHBUG00000007464	chd1l	98	81.250	ENSPLAG00000015145	chd1l	98	81.356	Poecilia_latipinna
ENSHBUG00000007464	chd1l	98	81.193	ENSPMEG00000008720	chd1l	99	81.532	Poecilia_mexicana
ENSHBUG00000007464	chd1l	98	80.320	ENSPREG00000017885	chd1l	98	80.320	Poecilia_reticulata
ENSHBUG00000007464	chd1l	97	63.730	ENSPPYG00000000946	CHD1L	98	63.247	Pongo_abelii
ENSHBUG00000007464	chd1l	92	58.029	ENSPCAG00000005959	CHD1L	91	58.293	Procavia_capensis
ENSHBUG00000007464	chd1l	94	60.973	ENSPVAG00000006084	CHD1L	99	61.013	Pteropus_vampyrus
ENSHBUG00000007464	chd1l	99	99.544	ENSPNYG00000013001	chd1l	98	99.544	Pundamilia_nyererei
ENSHBUG00000007464	chd1l	98	72.260	ENSPNAG00000011881	chd1l	94	70.321	Pygocentrus_nattereri
ENSHBUG00000007464	chd1l	96	64.821	ENSRNOG00000017669	Chd1l	98	64.286	Rattus_norvegicus
ENSHBUG00000007464	chd1l	96	63.542	ENSRBIG00000041272	CHD1L	97	62.828	Rhinopithecus_bieti
ENSHBUG00000007464	chd1l	96	63.657	ENSRROG00000041354	CHD1L	96	63.479	Rhinopithecus_roxellana
ENSHBUG00000007464	chd1l	98	62.144	ENSSHAG00000017395	CHD1L	99	62.247	Sarcophilus_harrisii
ENSHBUG00000007464	chd1l	98	71.804	ENSSFOG00015003649	chd1l	98	71.264	Scleropages_formosus
ENSHBUG00000007464	chd1l	98	81.356	ENSSMAG00000019377	chd1l	96	81.766	Scophthalmus_maximus
ENSHBUG00000007464	chd1l	98	82.110	ENSSDUG00000019831	chd1l	97	82.110	Seriola_dumerili
ENSHBUG00000007464	chd1l	98	81.193	ENSSLDG00000012714	chd1l	95	83.882	Seriola_lalandi_dorsalis
ENSHBUG00000007464	chd1l	96	62.587	ENSSPUG00000016865	CHD1L	98	62.500	Sphenodon_punctatus
ENSHBUG00000007464	chd1l	98	86.468	ENSSPAG00000017653	chd1l	100	86.961	Stegastes_partitus
ENSHBUG00000007464	chd1l	99	61.685	ENSSSCG00000006701	CHD1L	99	61.685	Sus_scrofa
ENSHBUG00000007464	chd1l	96	62.457	ENSTGUG00000013392	-	100	62.714	Taeniopygia_guttata
ENSHBUG00000007464	chd1l	96	69.601	ENSTNIG00000004902	chd1l	99	69.754	Tetraodon_nigroviridis
ENSHBUG00000007464	chd1l	96	61.298	ENSTTRG00000011711	CHD1L	99	61.682	Tursiops_truncatus
ENSHBUG00000007464	chd1l	98	63.923	ENSUAMG00000021991	CHD1L	97	64.460	Ursus_americanus
ENSHBUG00000007464	chd1l	98	63.820	ENSUMAG00000009733	CHD1L	98	64.228	Ursus_maritimus
ENSHBUG00000007464	chd1l	97	63.815	ENSVVUG00000007316	CHD1L	93	63.626	Vulpes_vulpes
ENSHBUG00000007464	chd1l	98	77.626	ENSXCOG00000008336	chd1l	93	77.416	Xiphophorus_couchianus
ENSHBUG00000007464	chd1l	98	81.714	ENSXMAG00000015898	chd1l	94	81.723	Xiphophorus_maculatus