EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000007535 (Gene tree)
Gene ID: 102294233
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 50029 bases
Position: chrJH425747.1:304099-354127
Accession: 102294233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000025510	La	PF05383.17	1.6e-13	1	1
ENSHBUP00000006145	La	PF05383.17	1.8e-13	1	1
ENSHBUP00000025499	La	PF05383.17	1.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000005797	LARP4B-202	2934	XM_005944735	ENSHBUP00000025510	708 (aa)	XP_005944797	-
ENSHBUT00000005812	LARP4B-203	3059	-	ENSHBUP00000025499	788 (aa)	-	-
ENSHBUT00000005789	LARP4B-201	3099	XM_005944733	ENSHBUP00000006145	763 (aa)	XP_005944795	UPI0003BDC298

Gene Model

Click here to download ENSHBUG00000007535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000007535's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000007535	LARP4B	100	56.983	ENSG00000107929	LARP4B	100	56.040	Homo_sapiens
ENSHBUG00000007535	LARP4B	100	77.975	ENSAPOG00000020531	LARP4B	95	90.747	Acanthochromis_polyacanthus
ENSHBUG00000007535	LARP4B	100	54.956	ENSAMEG00000001810	LARP4B	100	55.583	Ailuropoda_melanoleuca
ENSHBUG00000007535	LARP4B	98	73.848	ENSAOCG00000007887	-	100	90.925	Amphiprion_ocellaris
ENSHBUG00000007535	LARP4B	92	88.999	ENSAPEG00000002512	LARP4B	96	86.253	Amphiprion_percula
ENSHBUG00000007535	LARP4B	100	87.404	ENSATEG00000012614	LARP4B	100	87.404	Anabas_testudineus
ENSHBUG00000007535	LARP4B	100	59.750	ENSAPLG00000003813	LARP4B	98	59.402	Anas_platyrhynchos
ENSHBUG00000007535	LARP4B	100	60.051	ENSACAG00000002858	LARP4B	100	59.872	Anolis_carolinensis
ENSHBUG00000007535	LARP4B	100	56.305	ENSANAG00000007531	-	100	55.805	Aotus_nancymaae
ENSHBUG00000007535	LARP4B	100	98.741	ENSACLG00000026356	LARP4B	100	98.741	Astatotilapia_calliptera
ENSHBUG00000007535	LARP4B	94	54.913	ENSAMXG00000003335	larp4b	97	53.567	Astyanax_mexicanus
ENSHBUG00000007535	LARP4B	100	57.452	ENSBTAG00000013899	LARP4B	100	57.050	Bos_taurus
ENSHBUG00000007535	LARP4B	100	56.554	ENSCJAG00000018434	LARP4B	100	55.556	Callithrix_jacchus
ENSHBUG00000007535	LARP4B	100	55.583	ENSCAFG00020004209	LARP4B	100	56.336	Canis_lupus_dingo
ENSHBUG00000007535	LARP4B	99	55.514	ENSCHIG00000013543	LARP4B	99	54.777	Capra_hircus
ENSHBUG00000007535	LARP4B	89	61.705	ENSTSYG00000002568	LARP4B	100	60.930	Carlito_syrichta
ENSHBUG00000007535	LARP4B	89	55.659	ENSCAPG00000009725	LARP4B	84	54.977	Cavia_aperea
ENSHBUG00000007535	LARP4B	100	55.945	ENSCPOG00000009375	LARP4B	100	55.779	Cavia_porcellus
ENSHBUG00000007535	LARP4B	100	56.429	ENSCCAG00000024869	LARP4B	100	55.805	Cebus_capucinus
ENSHBUG00000007535	LARP4B	100	57.107	ENSCATG00000019750	LARP4B	100	56.164	Cercocebus_atys
ENSHBUG00000007535	LARP4B	100	57.490	ENSCLAG00000011570	LARP4B	100	57.106	Chinchilla_lanigera
ENSHBUG00000007535	LARP4B	64	78.788	ENSCHOG00000007831	-	59	78.788	Choloepus_hoffmanni
ENSHBUG00000007535	LARP4B	100	60.385	ENSCPBG00000017063	LARP4B	100	59.974	Chrysemys_picta_bellii
ENSHBUG00000007535	LARP4B	100	55.237	ENSCANG00000038021	LARP4B	100	54.296	Colobus_angolensis_palliatus
ENSHBUG00000007535	LARP4B	100	56.055	ENSCGRG00001022930	Larp4b	100	61.498	Cricetulus_griseus_chok1gshd
ENSHBUG00000007535	LARP4B	100	56.055	ENSCGRG00000006022	Larp4b	100	61.498	Cricetulus_griseus_crigri
ENSHBUG00000007535	LARP4B	100	75.800	ENSCSEG00000007342	LARP4B	100	75.800	Cynoglossus_semilaevis
ENSHBUG00000007535	LARP4B	100	85.232	ENSCVAG00000008910	LARP4B	100	85.091	Cyprinodon_variegatus
ENSHBUG00000007535	LARP4B	95	54.072	ENSDARG00000062146	larp4b	96	53.826	Danio_rerio
ENSHBUG00000007535	LARP4B	96	56.627	ENSDNOG00000045543	-	100	63.022	Dasypus_novemcinctus
ENSHBUG00000007535	LARP4B	100	54.557	ENSDORG00000009328	Larp4b	100	53.616	Dipodomys_ordii
ENSHBUG00000007535	LARP4B	88	58.286	ENSETEG00000011249	LARP4B	90	58.074	Echinops_telfairi
ENSHBUG00000007535	LARP4B	100	55.402	ENSEASG00005019068	-	100	55.194	Equus_asinus_asinus
ENSHBUG00000007535	LARP4B	100	55.834	ENSECAG00000024040	LARP4B	100	55.834	Equus_caballus
ENSHBUG00000007535	LARP4B	91	56.369	ENSEEUG00000008391	LARP4B	98	54.218	Erinaceus_europaeus
ENSHBUG00000007535	LARP4B	100	72.201	ENSELUG00000008626	LARP4B	100	71.482	Esox_lucius
ENSHBUG00000007535	LARP4B	88	41.715	ENSELUG00000001417	-	95	42.618	Esox_lucius
ENSHBUG00000007535	LARP4B	100	56.085	ENSFCAG00000000721	-	100	55.834	Felis_catus
ENSHBUG00000007535	LARP4B	100	61.076	ENSFALG00000006961	LARP4B	100	60.078	Ficedula_albicollis
ENSHBUG00000007535	LARP4B	100	56.375	ENSFDAG00000006158	LARP4B	97	55.820	Fukomys_damarensis
ENSHBUG00000007535	LARP4B	100	69.060	ENSFHEG00000013037	LARP4B	100	69.060	Fundulus_heteroclitus
ENSHBUG00000007535	LARP4B	78	68.165	ENSGMOG00000010818	-	92	67.790	Gadus_morhua
ENSHBUG00000007535	LARP4B	100	60.281	ENSGALG00000006672	LARP4B	100	59.770	Gallus_gallus
ENSHBUG00000007535	LARP4B	100	76.208	ENSGACG00000017535	LARP4B	98	75.713	Gasterosteus_aculeatus
ENSHBUG00000007535	LARP4B	94	58.912	ENSGAGG00000008598	LARP4B	100	58.480	Gopherus_agassizii
ENSHBUG00000007535	LARP4B	100	56.608	ENSGGOG00000003572	LARP4B	100	56.040	Gorilla_gorilla
ENSHBUG00000007535	LARP4B	100	56.787	ENSHGLG00000012936	LARP4B	100	63.884	Heterocephalus_glaber_female
ENSHBUG00000007535	LARP4B	100	56.804	ENSHGLG00100016220	-	100	56.429	Heterocephalus_glaber_male
ENSHBUG00000007535	LARP4B	85	51.914	ENSHGLG00100017261	-	100	51.608	Heterocephalus_glaber_male
ENSHBUG00000007535	LARP4B	99	72.199	ENSHCOG00000011581	LARP4B	89	72.199	Hippocampus_comes
ENSHBUG00000007535	LARP4B	94	53.378	ENSIPUG00000009705	larp4b	97	52.174	Ictalurus_punctatus
ENSHBUG00000007535	LARP4B	100	55.639	ENSSTOG00000000587	LARP4B	100	54.887	Ictidomys_tridecemlineatus
ENSHBUG00000007535	LARP4B	100	56.359	ENSJJAG00000020847	Larp4b	100	55.901	Jaculus_jaculus
ENSHBUG00000007535	LARP4B	100	89.986	ENSKMAG00000021674	LARP4B	100	89.986	Kryptolebias_marmoratus
ENSHBUG00000007535	LARP4B	80	87.840	ENSLBEG00000025293	-	82	91.092	Labrus_bergylta
ENSHBUG00000007535	LARP4B	94	57.629	ENSLACG00000009492	LARP4B	100	58.447	Latimeria_chalumnae
ENSHBUG00000007535	LARP4B	100	65.045	ENSLOCG00000012290	larp4b	100	65.306	Lepisosteus_oculatus
ENSHBUG00000007535	LARP4B	100	55.926	ENSLAFG00000015334	LARP4B	100	55.276	Loxodonta_africana
ENSHBUG00000007535	LARP4B	100	57.107	ENSMFAG00000001766	LARP4B	100	54.239	Macaca_fascicularis
ENSHBUG00000007535	LARP4B	100	57.107	ENSMMUG00000005279	LARP4B	100	56.164	Macaca_mulatta
ENSHBUG00000007535	LARP4B	100	56.983	ENSMNEG00000014019	LARP4B	100	54.115	Macaca_nemestrina
ENSHBUG00000007535	LARP4B	100	57.107	ENSMLEG00000035198	LARP4B	100	56.164	Mandrillus_leucophaeus
ENSHBUG00000007535	LARP4B	100	88.990	ENSMAMG00000013742	LARP4B	100	88.342	Mastacembelus_armatus
ENSHBUG00000007535	LARP4B	100	83.426	ENSMZEG00005006498	-	98	99.666	Maylandia_zebra
ENSHBUG00000007535	LARP4B	94	99.582	ENSMZEG00005014594	-	100	99.582	Maylandia_zebra
ENSHBUG00000007535	LARP4B	100	58.302	ENSMGAG00000005472	LARP4B	100	57.625	Meleagris_gallopavo
ENSHBUG00000007535	LARP4B	100	56.000	ENSMAUG00000021657	Larp4b	100	62.479	Mesocricetus_auratus
ENSHBUG00000007535	LARP4B	100	56.878	ENSMICG00000001301	LARP4B	100	56.539	Microcebus_murinus
ENSHBUG00000007535	LARP4B	87	62.034	ENSMOCG00000021452	Larp4b	100	61.460	Microtus_ochrogaster
ENSHBUG00000007535	LARP4B	90	96.552	ENSMMOG00000011253	-	100	74.309	Mola_mola
ENSHBUG00000007535	LARP4B	100	57.125	ENSMODG00000005957	LARP4B	100	57.253	Monodelphis_domestica
ENSHBUG00000007535	LARP4B	100	73.099	ENSMALG00000012432	LARP4B	100	72.958	Monopterus_albus
ENSHBUG00000007535	LARP4B	100	56.015	MGP_CAROLIEiJ_G0018216	Larp4b	100	62.287	Mus_caroli
ENSHBUG00000007535	LARP4B	100	56.125	ENSMUSG00000033499	Larp4b	100	62.069	Mus_musculus
ENSHBUG00000007535	LARP4B	100	56.391	MGP_PahariEiJ_G0019266	Larp4b	100	61.938	Mus_pahari
ENSHBUG00000007535	LARP4B	100	56.125	MGP_SPRETEiJ_G0019074	Larp4b	100	62.241	Mus_spretus
ENSHBUG00000007535	LARP4B	100	55.458	ENSMPUG00000016220	LARP4B	97	56.085	Mustela_putorius_furo
ENSHBUG00000007535	LARP4B	88	58.163	ENSMLUG00000005880	LARP4B	99	54.899	Myotis_lucifugus
ENSHBUG00000007535	LARP4B	100	56.468	ENSNGAG00000001750	Larp4b	100	56.571	Nannospalax_galili
ENSHBUG00000007535	LARP4B	100	76.602	ENSNBRG00000020018	LARP4B	98	79.570	Neolamprologus_brichardi
ENSHBUG00000007535	LARP4B	100	56.804	ENSNLEG00000013442	LARP4B	100	55.860	Nomascus_leucogenys
ENSHBUG00000007535	LARP4B	84	46.229	ENSMEUG00000013114	-	83	45.059	Notamacropus_eugenii
ENSHBUG00000007535	LARP4B	100	53.408	ENSOPRG00000003300	LARP4B	100	53.292	Ochotona_princeps
ENSHBUG00000007535	LARP4B	100	52.875	ENSODEG00000001109	LARP4B	100	58.632	Octodon_degus
ENSHBUG00000007535	LARP4B	100	97.532	ENSONIG00000017705	LARP4B	100	97.532	Oreochromis_niloticus
ENSHBUG00000007535	LARP4B	100	56.049	ENSOANG00000006100	LARP4B	100	56.010	Ornithorhynchus_anatinus
ENSHBUG00000007535	LARP4B	100	54.146	ENSOCUG00000004950	LARP4B	97	53.780	Oryctolagus_cuniculus
ENSHBUG00000007535	LARP4B	100	83.724	ENSORLG00000006080	LARP4B	100	83.464	Oryzias_latipes
ENSHBUG00000007535	LARP4B	100	84.951	ENSORLG00020020940	LARP4B	100	84.669	Oryzias_latipes_hni
ENSHBUG00000007535	LARP4B	100	84.908	ENSORLG00015020608	LARP4B	100	84.626	Oryzias_latipes_hsok
ENSHBUG00000007535	LARP4B	100	84.626	ENSOMEG00000019619	LARP4B	100	84.344	Oryzias_melastigma
ENSHBUG00000007535	LARP4B	96	55.435	ENSOGAG00000011540	LARP4B	99	54.830	Otolemur_garnettii
ENSHBUG00000007535	LARP4B	100	55.117	ENSOARG00000015320	LARP4B	98	54.603	Ovis_aries
ENSHBUG00000007535	LARP4B	100	57.107	ENSPPAG00000039232	LARP4B	100	56.164	Pan_paniscus
ENSHBUG00000007535	LARP4B	100	56.085	ENSPPRG00000009489	LARP4B	100	55.709	Panthera_pardus
ENSHBUG00000007535	LARP4B	100	56.085	ENSPTIG00000008543	LARP4B	100	55.709	Panthera_tigris_altaica
ENSHBUG00000007535	LARP4B	100	57.107	ENSPTRG00000002235	LARP4B	100	56.164	Pan_troglodytes
ENSHBUG00000007535	LARP4B	100	57.107	ENSPANG00000023546	LARP4B	100	54.239	Papio_anubis
ENSHBUG00000007535	LARP4B	98	60.523	ENSPKIG00000012368	LARP4B	96	60.290	Paramormyrops_kingsleyae
ENSHBUG00000007535	LARP4B	72	70.625	ENSPSIG00000005600	LARP4B	99	70.000	Pelodiscus_sinensis
ENSHBUG00000007535	LARP4B	85	75.735	ENSPMGG00000008261	LARP4B	87	75.551	Periophthalmus_magnuspinnatus
ENSHBUG00000007535	LARP4B	100	55.834	ENSPEMG00000014052	Larp4b	100	55.514	Peromyscus_maniculatus_bairdii
ENSHBUG00000007535	LARP4B	100	84.021	ENSPFOG00000000029	LARP4B	100	82.968	Poecilia_formosa
ENSHBUG00000007535	LARP4B	100	84.149	ENSPLAG00000002871	LARP4B	100	83.484	Poecilia_latipinna
ENSHBUG00000007535	LARP4B	100	84.401	ENSPMEG00000016361	LARP4B	100	83.287	Poecilia_mexicana
ENSHBUG00000007535	LARP4B	100	56.164	ENSPPYG00000002035	LARP4B	97	55.597	Pongo_abelii
ENSHBUG00000007535	LARP4B	100	56.297	ENSPCOG00000014688	LARP4B	100	55.919	Propithecus_coquereli
ENSHBUG00000007535	LARP4B	89	56.366	ENSPVAG00000009784	LARP4B	83	55.365	Pteropus_vampyrus
ENSHBUG00000007535	LARP4B	100	98.741	ENSPNYG00000024252	LARP4B	100	98.741	Pundamilia_nyererei
ENSHBUG00000007535	LARP4B	94	54.730	ENSPNAG00000028956	larp4b	96	53.784	Pygocentrus_nattereri
ENSHBUG00000007535	LARP4B	99	55.905	ENSRNOG00000015888	Larp4b	100	55.654	Rattus_norvegicus
ENSHBUG00000007535	LARP4B	100	57.107	ENSRBIG00000033294	LARP4B	100	56.164	Rhinopithecus_bieti
ENSHBUG00000007535	LARP4B	100	57.232	ENSRROG00000033879	LARP4B	100	56.289	Rhinopithecus_roxellana
ENSHBUG00000007535	LARP4B	100	51.183	ENSSBOG00000021109	LARP4B	100	50.498	Saimiri_boliviensis_boliviensis
ENSHBUG00000007535	LARP4B	100	59.207	ENSSHAG00000013392	LARP4B	100	58.974	Sarcophilus_harrisii
ENSHBUG00000007535	LARP4B	91	62.656	ENSSFOG00015003256	LARP4B	93	59.848	Scleropages_formosus
ENSHBUG00000007535	LARP4B	86	100.000	ENSSMAG00000005982	-	99	100.000	Scophthalmus_maximus
ENSHBUG00000007535	LARP4B	100	93.099	ENSSDUG00000006704	LARP4B	100	93.099	Seriola_dumerili
ENSHBUG00000007535	LARP4B	100	79.833	ENSSLDG00000020660	LARP4B	97	84.424	Seriola_lalandi_dorsalis
ENSHBUG00000007535	LARP4B	71	85.047	ENSSARG00000001243	-	79	85.047	Sorex_araneus
ENSHBUG00000007535	LARP4B	100	62.968	ENSSPUG00000002102	-	100	62.881	Sphenodon_punctatus
ENSHBUG00000007535	LARP4B	100	59.501	ENSSPUG00000013734	-	100	62.124	Sphenodon_punctatus
ENSHBUG00000007535	LARP4B	91	84.932	ENSSPAG00000014628	LARP4B	92	93.103	Stegastes_partitus
ENSHBUG00000007535	LARP4B	100	56.446	ENSSSCG00000011162	LARP4B	97	61.720	Sus_scrofa
ENSHBUG00000007535	LARP4B	100	59.924	ENSTGUG00000000811	-	100	59.823	Taeniopygia_guttata
ENSHBUG00000007535	LARP4B	99	68.488	ENSTNIG00000007991	LARP4B	100	73.992	Tetraodon_nigroviridis
ENSHBUG00000007535	LARP4B	100	70.408	ENSTNIG00000004571	-	98	70.229	Tetraodon_nigroviridis
ENSHBUG00000007535	LARP4B	78	60.694	ENSTTRG00000011151	LARP4B	86	61.078	Tursiops_truncatus
ENSHBUG00000007535	LARP4B	86	58.661	ENSUAMG00000016461	LARP4B	95	58.661	Ursus_americanus
ENSHBUG00000007535	LARP4B	100	55.583	ENSUMAG00000016127	LARP4B	100	56.211	Ursus_maritimus
ENSHBUG00000007535	LARP4B	100	55.332	ENSVVUG00000008641	LARP4B	100	56.085	Vulpes_vulpes
ENSHBUG00000007535	LARP4B	99	59.897	ENSXETG00000016882	larp4b	100	60.077	Xenopus_tropicalis
ENSHBUG00000007535	LARP4B	100	71.258	ENSXCOG00000019952	LARP4B	100	70.844	Xiphophorus_couchianus
ENSHBUG00000007535	LARP4B	100	84.658	ENSXMAG00000021533	LARP4B	100	83.520	Xiphophorus_maculatus