EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000007541 (Gene tree)
Gene ID: 106633399
Gene Symbol: si:ch1073-385f13.3
Alias: -
Full Name: DNA polymerase III PolC-type-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 3448 bases
Position: chrJH425455.1:726128-729575
Accession: 106633399
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000025511	RNase_T	PF00929.24	3.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000005784	-	1363	XM_014336578	ENSHBUP00000025511	195 (aa)	XP_014192064	UPI0006AB6259

Gene Model

Click here to download ENSHBUG00000007541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000007541's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000007541	si:ch1073-385f13.3	90	38.140	ENSAOCG00000011593	si:ch1073-296i8.2	77	38.140	Amphiprion_ocellaris
ENSHBUG00000007541	si:ch1073-385f13.3	90	38.140	ENSAPEG00000012492	si:ch1073-296i8.2	76	38.140	Amphiprion_percula
ENSHBUG00000007541	si:ch1073-385f13.3	98	72.539	ENSATEG00000021542	si:ch1073-385f13.3	99	72.539	Anabas_testudineus
ENSHBUG00000007541	si:ch1073-385f13.3	91	41.667	ENSATEG00000021547	si:ch1073-296i8.2	70	41.667	Anabas_testudineus
ENSHBUG00000007541	si:ch1073-385f13.3	95	88.710	ENSACLG00000023991	-	57	88.710	Astatotilapia_calliptera
ENSHBUG00000007541	si:ch1073-385f13.3	97	68.586	ENSCVAG00000001533	-	97	68.586	Cyprinodon_variegatus
ENSHBUG00000007541	si:ch1073-385f13.3	93	48.649	ENSDARG00000093773	si:ch1073-296i8.2	78	48.649	Danio_rerio
ENSHBUG00000007541	si:ch1073-385f13.3	97	49.485	ENSDARG00000092584	si:ch1073-385f13.3	79	49.485	Danio_rerio
ENSHBUG00000007541	si:ch1073-385f13.3	94	44.086	ENSFHEG00000018188	si:ch1073-296i8.2	74	44.086	Fundulus_heteroclitus
ENSHBUG00000007541	si:ch1073-385f13.3	100	65.306	ENSFHEG00000018181	-	99	65.306	Fundulus_heteroclitus
ENSHBUG00000007541	si:ch1073-385f13.3	90	44.134	ENSGMOG00000019335	si:ch1073-296i8.2	100	44.134	Gadus_morhua
ENSHBUG00000007541	si:ch1073-385f13.3	95	55.914	ENSGMOG00000019565	-	98	55.914	Gadus_morhua
ENSHBUG00000007541	si:ch1073-385f13.3	90	44.382	ENSGACG00000007185	si:ch1073-296i8.2	98	44.382	Gasterosteus_aculeatus
ENSHBUG00000007541	si:ch1073-385f13.3	94	44.086	ENSHCOG00000008574	si:ch1073-296i8.2	78	44.086	Hippocampus_comes
ENSHBUG00000007541	si:ch1073-385f13.3	96	42.932	ENSKMAG00000015660	si:ch1073-296i8.2	85	42.932	Kryptolebias_marmoratus
ENSHBUG00000007541	si:ch1073-385f13.3	97	70.157	ENSKMAG00000015669	-	97	70.157	Kryptolebias_marmoratus
ENSHBUG00000007541	si:ch1073-385f13.3	84	49.102	ENSLBEG00000019623	si:ch1073-296i8.2	65	49.102	Labrus_bergylta
ENSHBUG00000007541	si:ch1073-385f13.3	90	57.542	ENSLOCG00000014933	-	89	57.542	Lepisosteus_oculatus
ENSHBUG00000007541	si:ch1073-385f13.3	96	71.277	ENSMAMG00000023075	si:ch1073-385f13.3	97	71.277	Mastacembelus_armatus
ENSHBUG00000007541	si:ch1073-385f13.3	68	42.963	ENSMMOG00000018979	si:ch1073-296i8.2	63	42.963	Mola_mola
ENSHBUG00000007541	si:ch1073-385f13.3	97	73.684	ENSMALG00000015952	si:ch1073-385f13.3	97	73.684	Monopterus_albus
ENSHBUG00000007541	si:ch1073-385f13.3	100	95.897	ENSONIG00000012794	si:ch1073-385f13.3	100	95.897	Oreochromis_niloticus
ENSHBUG00000007541	si:ch1073-385f13.3	100	69.898	ENSORLG00000030645	si:ch1073-385f13.3	89	69.898	Oryzias_latipes
ENSHBUG00000007541	si:ch1073-385f13.3	94	44.086	ENSORLG00000023958	si:ch1073-296i8.2	84	44.086	Oryzias_latipes
ENSHBUG00000007541	si:ch1073-385f13.3	94	44.086	ENSORLG00020021912	si:ch1073-296i8.2	84	44.086	Oryzias_latipes_hni
ENSHBUG00000007541	si:ch1073-385f13.3	100	68.367	ENSORLG00020021903	-	100	68.367	Oryzias_latipes_hni
ENSHBUG00000007541	si:ch1073-385f13.3	94	44.086	ENSORLG00015015303	si:ch1073-296i8.2	84	44.086	Oryzias_latipes_hsok
ENSHBUG00000007541	si:ch1073-385f13.3	90	52.809	ENSPKIG00000023552	-	82	52.809	Paramormyrops_kingsleyae
ENSHBUG00000007541	si:ch1073-385f13.3	95	65.054	ENSPFOG00000021742	-	98	65.054	Poecilia_formosa
ENSHBUG00000007541	si:ch1073-385f13.3	98	64.249	ENSPFOG00000005521	si:ch1073-385f13.3	98	64.249	Poecilia_formosa
ENSHBUG00000007541	si:ch1073-385f13.3	95	65.591	ENSPMEG00000013087	si:ch1073-385f13.3	97	65.591	Poecilia_mexicana
ENSHBUG00000007541	si:ch1073-385f13.3	98	63.731	ENSPMEG00000013096	si:ch1073-385f13.3	98	63.731	Poecilia_mexicana
ENSHBUG00000007541	si:ch1073-385f13.3	93	57.416	ENSPREG00000013537	-	79	57.416	Poecilia_reticulata
ENSHBUG00000007541	si:ch1073-385f13.3	90	57.955	ENSPNAG00000018956	si:ch1073-385f13.3	94	57.955	Pygocentrus_nattereri
ENSHBUG00000007541	si:ch1073-385f13.3	89	44.068	ENSSMAG00000004874	si:ch1073-296i8.2	68	44.068	Scophthalmus_maximus
ENSHBUG00000007541	si:ch1073-385f13.3	99	72.308	ENSSLDG00000002379	si:ch1073-385f13.3	99	72.308	Seriola_lalandi_dorsalis
ENSHBUG00000007541	si:ch1073-385f13.3	95	45.745	ENSSPAG00000012797	si:ch1073-296i8.2	95	45.745	Stegastes_partitus
ENSHBUG00000007541	si:ch1073-385f13.3	93	45.652	ENSTNIG00000010399	si:ch1073-296i8.2	80	45.652	Tetraodon_nigroviridis
ENSHBUG00000007541	si:ch1073-385f13.3	98	63.731	ENSXMAG00000021869	si:ch1073-385f13.3	98	63.731	Xiphophorus_maculatus