EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000007705 (Gene tree)
Gene ID: 102312644
Gene Symbol: sf3b1
Alias: tst|wu:fb99f09
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 16260 bases
Position: chrJH425477.1:764461-780720
Accession: 102312644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000025582	SF3b1	PF08920.10	1e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000005598	-	4291	XM_014337125	ENSHBUP00000025582	1310 (aa)	XP_014192611	-

Gene Model

Click here to download ENSHBUG00000007705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000007705's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000007705	sf3b1	99	92.770	ENSG00000115524	SF3B1	99	92.922	Homo_sapiens
ENSHBUG00000007705	sf3b1	100	98.021	ENSAPOG00000011894	sf3b1	99	98.172	Acanthochromis_polyacanthus
ENSHBUG00000007705	sf3b1	99	92.649	ENSAMEG00000013809	SF3B1	99	92.802	Ailuropoda_melanoleuca
ENSHBUG00000007705	sf3b1	100	99.084	ENSACIG00000020910	sf3b1	97	99.084	Amphilophus_citrinellus
ENSHBUG00000007705	sf3b1	99	98.172	ENSAOCG00000004478	sf3b1	99	98.172	Amphiprion_ocellaris
ENSHBUG00000007705	sf3b1	99	98.172	ENSAPEG00000012937	sf3b1	99	98.172	Amphiprion_percula
ENSHBUG00000007705	sf3b1	99	97.713	ENSATEG00000020435	sf3b1	99	97.713	Anabas_testudineus
ENSHBUG00000007705	sf3b1	99	92.939	ENSAPLG00000003993	SF3B1	99	92.939	Anas_platyrhynchos
ENSHBUG00000007705	sf3b1	99	92.688	ENSACAG00000009612	SF3B1	99	92.688	Anolis_carolinensis
ENSHBUG00000007705	sf3b1	99	92.770	ENSANAG00000021577	SF3B1	99	94.340	Aotus_nancymaae
ENSHBUG00000007705	sf3b1	100	100.000	ENSACLG00000023470	sf3b1	99	100.000	Astatotilapia_calliptera
ENSHBUG00000007705	sf3b1	99	96.043	ENSAMXG00000002219	sf3b1	99	96.043	Astyanax_mexicanus
ENSHBUG00000007705	sf3b1	99	92.770	ENSBTAG00000008915	SF3B1	99	92.922	Bos_taurus
ENSHBUG00000007705	sf3b1	99	64.528	WBGene00011605	sftb-1	99	64.602	Caenorhabditis_elegans
ENSHBUG00000007705	sf3b1	99	92.770	ENSCJAG00000003902	SF3B1	99	92.922	Callithrix_jacchus
ENSHBUG00000007705	sf3b1	99	92.770	ENSCAFG00000010826	SF3B1	99	92.922	Canis_familiaris
ENSHBUG00000007705	sf3b1	99	92.770	ENSCAFG00020004750	SF3B1	99	92.922	Canis_lupus_dingo
ENSHBUG00000007705	sf3b1	99	92.770	ENSCHIG00000015226	SF3B1	99	92.922	Capra_hircus
ENSHBUG00000007705	sf3b1	99	92.694	ENSTSYG00000009214	SF3B1	99	92.846	Carlito_syrichta
ENSHBUG00000007705	sf3b1	99	92.595	ENSCAPG00000006547	SF3B1	99	92.748	Cavia_aperea
ENSHBUG00000007705	sf3b1	99	92.715	ENSCPOG00000009353	SF3B1	99	92.868	Cavia_porcellus
ENSHBUG00000007705	sf3b1	99	92.770	ENSCCAG00000020506	SF3B1	99	92.922	Cebus_capucinus
ENSHBUG00000007705	sf3b1	99	92.770	ENSCATG00000035735	SF3B1	99	92.922	Cercocebus_atys
ENSHBUG00000007705	sf3b1	99	92.720	ENSCLAG00000014767	SF3B1	99	92.874	Chinchilla_lanigera
ENSHBUG00000007705	sf3b1	99	92.770	ENSCSAG00000011505	SF3B1	99	92.922	Chlorocebus_sabaeus
ENSHBUG00000007705	sf3b1	76	91.676	ENSCHOG00000009860	SF3B1	76	91.676	Choloepus_hoffmanni
ENSHBUG00000007705	sf3b1	99	92.912	ENSCPBG00000021902	SF3B1	99	94.266	Chrysemys_picta_bellii
ENSHBUG00000007705	sf3b1	68	77.535	ENSCING00000002558	-	99	77.949	Ciona_intestinalis
ENSHBUG00000007705	sf3b1	99	79.653	ENSCSAVG00000002559	-	99	79.653	Ciona_savignyi
ENSHBUG00000007705	sf3b1	99	92.770	ENSCANG00000029415	SF3B1	99	92.922	Colobus_angolensis_palliatus
ENSHBUG00000007705	sf3b1	99	92.770	ENSCGRG00001016990	Sf3b1	99	92.922	Cricetulus_griseus_chok1gshd
ENSHBUG00000007705	sf3b1	99	92.770	ENSCGRG00000005301	Sf3b1	99	92.922	Cricetulus_griseus_crigri
ENSHBUG00000007705	sf3b1	99	93.140	ENSCSEG00000003860	sf3b1	99	93.140	Cynoglossus_semilaevis
ENSHBUG00000007705	sf3b1	96	97.308	ENSCVAG00000003680	sf3b1	99	97.308	Cyprinodon_variegatus
ENSHBUG00000007705	sf3b1	99	94.593	ENSDARG00000056138	sf3b1	99	94.593	Danio_rerio
ENSHBUG00000007705	sf3b1	99	92.700	ENSDNOG00000011754	SF3B1	99	92.852	Dasypus_novemcinctus
ENSHBUG00000007705	sf3b1	99	90.798	ENSDORG00000002399	Sf3b1	99	90.798	Dipodomys_ordii
ENSHBUG00000007705	sf3b1	100	76.009	FBgn0031266	Sf3b1	99	76.009	Drosophila_melanogaster
ENSHBUG00000007705	sf3b1	83	91.284	ENSETEG00000009188	SF3B1	100	91.468	Echinops_telfairi
ENSHBUG00000007705	sf3b1	99	85.344	ENSEBUG00000004325	sf3b1	99	88.362	Eptatretus_burgeri
ENSHBUG00000007705	sf3b1	99	92.770	ENSEASG00005020159	SF3B1	97	92.922	Equus_asinus_asinus
ENSHBUG00000007705	sf3b1	99	92.770	ENSECAG00000021657	SF3B1	97	92.922	Equus_caballus
ENSHBUG00000007705	sf3b1	81	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSHBUG00000007705	sf3b1	99	95.159	ENSELUG00000005977	sf3b1	98	95.159	Esox_lucius
ENSHBUG00000007705	sf3b1	99	92.770	ENSFCAG00000005038	SF3B1	99	92.922	Felis_catus
ENSHBUG00000007705	sf3b1	99	93.016	ENSFALG00000004281	SF3B1	99	93.016	Ficedula_albicollis
ENSHBUG00000007705	sf3b1	99	92.770	ENSFDAG00000017510	SF3B1	99	92.922	Fukomys_damarensis
ENSHBUG00000007705	sf3b1	99	96.573	ENSFHEG00000014333	sf3b1	99	96.573	Fundulus_heteroclitus
ENSHBUG00000007705	sf3b1	99	95.057	ENSGMOG00000006773	sf3b1	99	95.057	Gadus_morhua
ENSHBUG00000007705	sf3b1	99	92.988	ENSGALG00000008038	SF3B1	99	92.988	Gallus_gallus
ENSHBUG00000007705	sf3b1	98	97.448	ENSGAFG00000000704	sf3b1	99	97.448	Gambusia_affinis
ENSHBUG00000007705	sf3b1	99	95.814	ENSGACG00000008839	sf3b1	99	95.814	Gasterosteus_aculeatus
ENSHBUG00000007705	sf3b1	99	92.786	ENSGAGG00000017478	SF3B1	99	92.279	Gopherus_agassizii
ENSHBUG00000007705	sf3b1	99	87.423	ENSGGOG00000009264	SF3B1	99	87.653	Gorilla_gorilla
ENSHBUG00000007705	sf3b1	99	92.720	ENSHGLG00000008285	-	99	92.874	Heterocephalus_glaber_female
ENSHBUG00000007705	sf3b1	99	90.728	ENSHGLG00100005535	-	99	90.881	Heterocephalus_glaber_male
ENSHBUG00000007705	sf3b1	99	96.136	ENSHCOG00000016775	sf3b1	99	96.136	Hippocampus_comes
ENSHBUG00000007705	sf3b1	99	95.811	ENSIPUG00000013171	sf3b1	99	95.811	Ictalurus_punctatus
ENSHBUG00000007705	sf3b1	99	92.770	ENSSTOG00000011034	SF3B1	99	92.922	Ictidomys_tridecemlineatus
ENSHBUG00000007705	sf3b1	99	92.692	ENSJJAG00000010903	Sf3b1	99	92.846	Jaculus_jaculus
ENSHBUG00000007705	sf3b1	99	96.809	ENSKMAG00000004009	sf3b1	99	96.809	Kryptolebias_marmoratus
ENSHBUG00000007705	sf3b1	100	96.344	ENSLBEG00000022208	sf3b1	99	96.344	Labrus_bergylta
ENSHBUG00000007705	sf3b1	99	89.718	ENSLACG00000014832	SF3B1	99	89.718	Latimeria_chalumnae
ENSHBUG00000007705	sf3b1	99	94.390	ENSLOCG00000003899	sf3b1	99	94.390	Lepisosteus_oculatus
ENSHBUG00000007705	sf3b1	99	92.770	ENSLAFG00000001956	SF3B1	99	92.922	Loxodonta_africana
ENSHBUG00000007705	sf3b1	99	92.720	ENSMMUG00000022430	SF3B1	99	92.874	Macaca_mulatta
ENSHBUG00000007705	sf3b1	99	92.770	ENSMNEG00000042333	SF3B1	99	94.340	Macaca_nemestrina
ENSHBUG00000007705	sf3b1	94	88.145	ENSMLEG00000026141	SF3B1	98	88.023	Mandrillus_leucophaeus
ENSHBUG00000007705	sf3b1	99	97.790	ENSMAMG00000010241	sf3b1	99	97.790	Mastacembelus_armatus
ENSHBUG00000007705	sf3b1	100	100.000	ENSMZEG00005021254	sf3b1	99	100.000	Maylandia_zebra
ENSHBUG00000007705	sf3b1	99	92.402	ENSMGAG00000007017	SF3B1	99	92.402	Meleagris_gallopavo
ENSHBUG00000007705	sf3b1	99	88.506	ENSMAUG00000009071	Sf3b1	99	88.659	Mesocricetus_auratus
ENSHBUG00000007705	sf3b1	99	92.770	ENSMICG00000013879	SF3B1	99	92.922	Microcebus_murinus
ENSHBUG00000007705	sf3b1	99	88.438	ENSMOCG00000000455	Sf3b1	99	88.438	Microtus_ochrogaster
ENSHBUG00000007705	sf3b1	84	96.997	ENSMMOG00000000475	sf3b1	100	96.997	Mola_mola
ENSHBUG00000007705	sf3b1	99	92.161	ENSMODG00000012275	SF3B1	99	92.314	Monodelphis_domestica
ENSHBUG00000007705	sf3b1	99	97.790	ENSMALG00000017211	sf3b1	99	97.790	Monopterus_albus
ENSHBUG00000007705	sf3b1	99	92.770	MGP_CAROLIEiJ_G0014141	Sf3b1	99	92.922	Mus_caroli
ENSHBUG00000007705	sf3b1	99	92.770	ENSMUSG00000025982	Sf3b1	99	92.922	Mus_musculus
ENSHBUG00000007705	sf3b1	99	92.770	MGP_SPRETEiJ_G0014947	Sf3b1	99	92.922	Mus_spretus
ENSHBUG00000007705	sf3b1	99	92.770	ENSMPUG00000007799	SF3B1	99	92.922	Mustela_putorius_furo
ENSHBUG00000007705	sf3b1	99	91.629	ENSMLUG00000000840	SF3B1	99	91.781	Myotis_lucifugus
ENSHBUG00000007705	sf3b1	99	92.443	ENSNGAG00000021884	-	99	92.595	Nannospalax_galili
ENSHBUG00000007705	sf3b1	100	94.669	ENSNBRG00000015816	sf3b1	99	94.669	Neolamprologus_brichardi
ENSHBUG00000007705	sf3b1	99	92.770	ENSNLEG00000006861	SF3B1	99	92.922	Nomascus_leucogenys
ENSHBUG00000007705	sf3b1	63	99.717	ENSMEUG00000015848	-	66	99.717	Notamacropus_eugenii
ENSHBUG00000007705	sf3b1	99	80.194	ENSOPRG00000008596	SF3B1	99	80.343	Ochotona_princeps
ENSHBUG00000007705	sf3b1	99	92.770	ENSODEG00000011153	-	99	92.922	Octodon_degus
ENSHBUG00000007705	sf3b1	100	100.000	ENSONIG00000013758	sf3b1	99	100.000	Oreochromis_niloticus
ENSHBUG00000007705	sf3b1	82	95.471	ENSOCUG00000012722	-	96	95.471	Oryctolagus_cuniculus
ENSHBUG00000007705	sf3b1	99	97.104	ENSORLG00000020219	sf3b1	99	97.104	Oryzias_latipes
ENSHBUG00000007705	sf3b1	99	97.104	ENSORLG00020001746	sf3b1	99	97.104	Oryzias_latipes_hni
ENSHBUG00000007705	sf3b1	64	95.018	ENSORLG00015001759	sf3b1	98	95.018	Oryzias_latipes_hsok
ENSHBUG00000007705	sf3b1	99	97.487	ENSOMEG00000019231	sf3b1	99	97.487	Oryzias_melastigma
ENSHBUG00000007705	sf3b1	99	92.770	ENSOARG00000015374	SF3B1	99	92.922	Ovis_aries
ENSHBUG00000007705	sf3b1	99	92.770	ENSPPAG00000035007	SF3B1	99	92.922	Pan_paniscus
ENSHBUG00000007705	sf3b1	99	92.770	ENSPPRG00000009090	SF3B1	99	92.922	Panthera_pardus
ENSHBUG00000007705	sf3b1	99	92.770	ENSPTIG00000021557	SF3B1	99	92.922	Panthera_tigris_altaica
ENSHBUG00000007705	sf3b1	99	85.321	ENSPTRG00000012771	SF3B1	99	85.398	Pan_troglodytes
ENSHBUG00000007705	sf3b1	99	92.770	ENSPANG00000013417	SF3B1	99	92.922	Papio_anubis
ENSHBUG00000007705	sf3b1	99	95.209	ENSPKIG00000000784	sf3b1	99	95.209	Paramormyrops_kingsleyae
ENSHBUG00000007705	sf3b1	99	91.782	ENSPSIG00000017222	SF3B1	98	91.782	Pelodiscus_sinensis
ENSHBUG00000007705	sf3b1	91	96.390	ENSPMGG00000004330	sf3b1	99	96.390	Periophthalmus_magnuspinnatus
ENSHBUG00000007705	sf3b1	99	92.720	ENSPEMG00000010699	Sf3b1	99	92.874	Peromyscus_maniculatus_bairdii
ENSHBUG00000007705	sf3b1	99	88.275	ENSPMAG00000001311	sf3b1	99	88.578	Petromyzon_marinus
ENSHBUG00000007705	sf3b1	99	92.237	ENSPCIG00000010642	SF3B1	99	92.390	Phascolarctos_cinereus
ENSHBUG00000007705	sf3b1	99	97.489	ENSPFOG00000000073	sf3b1	99	97.489	Poecilia_formosa
ENSHBUG00000007705	sf3b1	99	97.487	ENSPLAG00000002293	sf3b1	99	97.487	Poecilia_latipinna
ENSHBUG00000007705	sf3b1	99	97.563	ENSPMEG00000000446	sf3b1	98	97.563	Poecilia_mexicana
ENSHBUG00000007705	sf3b1	99	97.639	ENSPREG00000019652	sf3b1	99	97.639	Poecilia_reticulata
ENSHBUG00000007705	sf3b1	99	96.392	ENSPPYG00000013044	SF3B1	95	96.392	Pongo_abelii
ENSHBUG00000007705	sf3b1	99	92.618	ENSPCAG00000009292	SF3B1	99	92.770	Procavia_capensis
ENSHBUG00000007705	sf3b1	99	92.770	ENSPCOG00000024074	SF3B1	99	92.922	Propithecus_coquereli
ENSHBUG00000007705	sf3b1	99	92.770	ENSPVAG00000008302	SF3B1	99	92.922	Pteropus_vampyrus
ENSHBUG00000007705	sf3b1	100	99.924	ENSPNYG00000014939	sf3b1	99	99.924	Pundamilia_nyererei
ENSHBUG00000007705	sf3b1	99	95.967	ENSPNAG00000008288	sf3b1	99	95.967	Pygocentrus_nattereri
ENSHBUG00000007705	sf3b1	99	92.770	ENSRNOG00000013516	Sf3b1	99	92.922	Rattus_norvegicus
ENSHBUG00000007705	sf3b1	99	89.024	ENSRBIG00000026096	SF3B1	99	89.177	Rhinopithecus_bieti
ENSHBUG00000007705	sf3b1	99	92.770	ENSRROG00000031308	SF3B1	99	92.922	Rhinopithecus_roxellana
ENSHBUG00000007705	sf3b1	99	92.770	ENSSBOG00000020080	SF3B1	99	92.922	Saimiri_boliviensis_boliviensis
ENSHBUG00000007705	sf3b1	99	92.161	ENSSHAG00000017564	SF3B1	99	92.314	Sarcophilus_harrisii
ENSHBUG00000007705	sf3b1	99	95.583	ENSSFOG00015021535	sf3b1	99	95.583	Scleropages_formosus
ENSHBUG00000007705	sf3b1	99	96.813	ENSSMAG00000013977	sf3b1	99	96.813	Scophthalmus_maximus
ENSHBUG00000007705	sf3b1	99	97.866	ENSSDUG00000017422	sf3b1	99	97.866	Seriola_dumerili
ENSHBUG00000007705	sf3b1	99	97.790	ENSSLDG00000019495	sf3b1	99	97.790	Seriola_lalandi_dorsalis
ENSHBUG00000007705	sf3b1	75	98.940	ENSSARG00000007016	SF3B1	75	98.940	Sorex_araneus
ENSHBUG00000007705	sf3b1	99	92.683	ENSSPUG00000000410	SF3B1	99	92.683	Sphenodon_punctatus
ENSHBUG00000007705	sf3b1	99	98.323	ENSSPAG00000010451	sf3b1	99	98.323	Stegastes_partitus
ENSHBUG00000007705	sf3b1	89	94.340	ENSSSCG00000016075	SF3B1	99	94.340	Sus_scrofa
ENSHBUG00000007705	sf3b1	99	92.988	ENSTGUG00000010553	SF3B1	99	92.988	Taeniopygia_guttata
ENSHBUG00000007705	sf3b1	99	96.646	ENSTRUG00000015534	sf3b1	99	96.646	Takifugu_rubripes
ENSHBUG00000007705	sf3b1	84	96.384	ENSTBEG00000008714	SF3B1	93	96.384	Tupaia_belangeri
ENSHBUG00000007705	sf3b1	92	93.409	ENSTTRG00000003414	SF3B1	92	93.409	Tursiops_truncatus
ENSHBUG00000007705	sf3b1	94	81.789	ENSUAMG00000018506	SF3B1	99	97.967	Ursus_americanus
ENSHBUG00000007705	sf3b1	99	92.770	ENSUMAG00000020945	SF3B1	99	92.922	Ursus_maritimus
ENSHBUG00000007705	sf3b1	95	92.766	ENSVPAG00000005798	SF3B1	95	92.766	Vicugna_pacos
ENSHBUG00000007705	sf3b1	99	92.770	ENSVVUG00000025948	SF3B1	94	92.922	Vulpes_vulpes
ENSHBUG00000007705	sf3b1	99	91.248	ENSXETG00000013339	sf3b1	99	91.248	Xenopus_tropicalis
ENSHBUG00000007705	sf3b1	100	92.846	ENSXCOG00000018086	sf3b1	99	93.151	Xiphophorus_couchianus
ENSHBUG00000007705	sf3b1	99	97.411	ENSXMAG00000007369	sf3b1	100	97.381	Xiphophorus_maculatus