EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000007793 (Gene tree)
Gene ID: 102300856
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 12050 bases
Position: chrJH425568.1:454343-466392
Accession: 102300856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000006296	ResIII	PF04851.15	7.5e-10	1	1
ENSHBUP00000006308	ResIII	PF04851.15	9.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000005529	-	2160	-	ENSHBUP00000006296	719 (aa)	-	-
ENSHBUT00000005477	-	4810	XM_005938395	ENSHBUP00000006308	739 (aa)	XP_005938457	UPI0003BDC5D7

Gene Model

Click here to download ENSHBUG00000007793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000007793's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000007793	rad54l	71	30.709	ENSHBUG00000007464	chd1l	51	31.062
ENSHBUG00000007793	rad54l	86	45.659	ENSHBUG00000016017	rad54b	65	46.290

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000007793	rad54l	99	77.614	ENSG00000085999	RAD54L	100	84.000	Homo_sapiens
ENSHBUG00000007793	rad54l	99	86.395	ENSAPOG00000011643	rad54l	99	86.395	Acanthochromis_polyacanthus
ENSHBUG00000007793	rad54l	99	76.644	ENSAMEG00000013902	RAD54L	99	76.644	Ailuropoda_melanoleuca
ENSHBUG00000007793	rad54l	99	91.192	ENSACIG00000001939	rad54l	99	91.192	Amphilophus_citrinellus
ENSHBUG00000007793	rad54l	99	89.538	ENSAOCG00000017576	rad54l	99	89.538	Amphiprion_ocellaris
ENSHBUG00000007793	rad54l	96	89.816	ENSAPEG00000020658	rad54l	98	89.816	Amphiprion_percula
ENSHBUG00000007793	rad54l	95	90.028	ENSATEG00000006767	rad54l	100	90.028	Anabas_testudineus
ENSHBUG00000007793	rad54l	97	80.115	ENSAPLG00000006389	RAD54L	99	81.688	Anas_platyrhynchos
ENSHBUG00000007793	rad54l	99	80.350	ENSACAG00000002312	RAD54L	99	80.350	Anolis_carolinensis
ENSHBUG00000007793	rad54l	99	77.212	ENSANAG00000035439	RAD54L	99	77.346	Aotus_nancymaae
ENSHBUG00000007793	rad54l	100	99.729	ENSACLG00000018711	rad54l	100	99.729	Astatotilapia_calliptera
ENSHBUG00000007793	rad54l	100	84.232	ENSAMXG00000012777	rad54l	100	84.232	Astyanax_mexicanus
ENSHBUG00000007793	rad54l	99	76.975	ENSBTAG00000019901	RAD54L	99	76.975	Bos_taurus
ENSHBUG00000007793	rad54l	95	57.983	WBGene00004298	rad-54	87	57.983	Caenorhabditis_elegans
ENSHBUG00000007793	rad54l	97	77.469	ENSCJAG00000021080	RAD54L	91	77.469	Callithrix_jacchus
ENSHBUG00000007793	rad54l	99	77.078	ENSCAFG00000004272	RAD54L	99	77.078	Canis_familiaris
ENSHBUG00000007793	rad54l	99	77.047	ENSCAFG00020015066	RAD54L	99	77.047	Canis_lupus_dingo
ENSHBUG00000007793	rad54l	99	76.944	ENSCHIG00000020118	RAD54L	99	76.944	Capra_hircus
ENSHBUG00000007793	rad54l	99	76.975	ENSTSYG00000002032	RAD54L	99	76.975	Carlito_syrichta
ENSHBUG00000007793	rad54l	99	77.480	ENSCPOG00000006768	RAD54L	99	77.480	Cavia_porcellus
ENSHBUG00000007793	rad54l	99	77.748	ENSCCAG00000025783	RAD54L	99	77.748	Cebus_capucinus
ENSHBUG00000007793	rad54l	99	77.212	ENSCATG00000030589	RAD54L	99	77.212	Cercocebus_atys
ENSHBUG00000007793	rad54l	99	77.614	ENSCLAG00000004645	RAD54L	99	77.614	Chinchilla_lanigera
ENSHBUG00000007793	rad54l	99	77.346	ENSCSAG00000001229	RAD54L	99	77.346	Chlorocebus_sabaeus
ENSHBUG00000007793	rad54l	99	79.812	ENSCPBG00000005675	RAD54L	99	79.812	Chrysemys_picta_bellii
ENSHBUG00000007793	rad54l	99	62.387	ENSCING00000024456	-	99	62.257	Ciona_intestinalis
ENSHBUG00000007793	rad54l	100	61.961	ENSCSAVG00000010859	-	100	62.092	Ciona_savignyi
ENSHBUG00000007793	rad54l	99	77.078	ENSCANG00000034891	RAD54L	99	77.078	Colobus_angolensis_palliatus
ENSHBUG00000007793	rad54l	99	76.747	ENSCGRG00001014807	Rad54l	99	76.747	Cricetulus_griseus_chok1gshd
ENSHBUG00000007793	rad54l	99	76.747	ENSCGRG00000016038	Rad54l	99	76.747	Cricetulus_griseus_crigri
ENSHBUG00000007793	rad54l	99	86.008	ENSCSEG00000001983	rad54l	99	86.008	Cynoglossus_semilaevis
ENSHBUG00000007793	rad54l	83	84.520	ENSCVAG00000019561	rad54l	100	84.520	Cyprinodon_variegatus
ENSHBUG00000007793	rad54l	100	83.243	ENSDARG00000018623	rad54l	100	83.243	Danio_rerio
ENSHBUG00000007793	rad54l	99	76.676	ENSDNOG00000003395	RAD54L	99	76.676	Dasypus_novemcinctus
ENSHBUG00000007793	rad54l	99	70.509	ENSDORG00000002632	Rad54l	99	70.509	Dipodomys_ordii
ENSHBUG00000007793	rad54l	99	54.255	FBgn0002989	okr	95	54.255	Drosophila_melanogaster
ENSHBUG00000007793	rad54l	78	76.638	ENSETEG00000000550	RAD54L	78	76.638	Echinops_telfairi
ENSHBUG00000007793	rad54l	99	76.913	ENSEASG00005004511	RAD54L	98	78.686	Equus_asinus_asinus
ENSHBUG00000007793	rad54l	99	77.871	ENSECAG00000008760	RAD54L	99	77.871	Equus_caballus
ENSHBUG00000007793	rad54l	99	74.263	ENSEEUG00000008113	RAD54L	99	74.263	Erinaceus_europaeus
ENSHBUG00000007793	rad54l	100	85.255	ENSELUG00000002295	rad54l	100	85.255	Esox_lucius
ENSHBUG00000007793	rad54l	99	76.439	ENSFCAG00000003444	RAD54L	99	76.439	Felis_catus
ENSHBUG00000007793	rad54l	99	79.408	ENSFALG00000009480	RAD54L	99	79.408	Ficedula_albicollis
ENSHBUG00000007793	rad54l	99	77.212	ENSFDAG00000007806	RAD54L	99	77.212	Fukomys_damarensis
ENSHBUG00000007793	rad54l	63	82.112	ENSFHEG00000009824	rad54l	80	82.112	Fundulus_heteroclitus
ENSHBUG00000007793	rad54l	99	83.627	ENSGMOG00000014568	rad54l	100	83.627	Gadus_morhua
ENSHBUG00000007793	rad54l	99	79.217	ENSGALG00000010356	RAD54L	92	79.217	Gallus_gallus
ENSHBUG00000007793	rad54l	91	85.015	ENSGAFG00000011110	rad54l	100	85.015	Gambusia_affinis
ENSHBUG00000007793	rad54l	100	87.449	ENSGACG00000003111	rad54l	98	87.449	Gasterosteus_aculeatus
ENSHBUG00000007793	rad54l	99	79.111	ENSGAGG00000014089	RAD54L	96	79.111	Gopherus_agassizii
ENSHBUG00000007793	rad54l	99	77.212	ENSGGOG00000010602	RAD54L	99	77.212	Gorilla_gorilla
ENSHBUG00000007793	rad54l	99	77.346	ENSHGLG00000000753	RAD54L	99	77.346	Heterocephalus_glaber_female
ENSHBUG00000007793	rad54l	99	77.212	ENSHGLG00100016987	RAD54L	99	76.944	Heterocephalus_glaber_male
ENSHBUG00000007793	rad54l	100	82.100	ENSIPUG00000015999	rad54l	100	84.935	Ictalurus_punctatus
ENSHBUG00000007793	rad54l	99	76.676	ENSSTOG00000029125	RAD54L	99	76.676	Ictidomys_tridecemlineatus
ENSHBUG00000007793	rad54l	99	63.941	ENSJJAG00000000235	-	99	63.807	Jaculus_jaculus
ENSHBUG00000007793	rad54l	100	86.622	ENSKMAG00000009944	rad54l	100	86.622	Kryptolebias_marmoratus
ENSHBUG00000007793	rad54l	99	88.315	ENSLBEG00000014617	rad54l	97	90.462	Labrus_bergylta
ENSHBUG00000007793	rad54l	100	83.445	ENSLOCG00000004144	rad54l	100	84.695	Lepisosteus_oculatus
ENSHBUG00000007793	rad54l	99	76.510	ENSLAFG00000007583	RAD54L	99	76.913	Loxodonta_africana
ENSHBUG00000007793	rad54l	99	77.078	ENSMFAG00000031241	RAD54L	99	77.078	Macaca_fascicularis
ENSHBUG00000007793	rad54l	99	77.078	ENSMMUG00000011568	RAD54L	99	77.078	Macaca_mulatta
ENSHBUG00000007793	rad54l	99	77.078	ENSMNEG00000038562	RAD54L	99	77.078	Macaca_nemestrina
ENSHBUG00000007793	rad54l	99	77.212	ENSMLEG00000038145	RAD54L	99	77.212	Mandrillus_leucophaeus
ENSHBUG00000007793	rad54l	99	86.160	ENSMAMG00000022180	rad54l	99	88.314	Mastacembelus_armatus
ENSHBUG00000007793	rad54l	100	99.594	ENSMZEG00005018081	rad54l	100	99.594	Maylandia_zebra
ENSHBUG00000007793	rad54l	99	79.459	ENSMGAG00000010634	RAD54L	99	79.459	Meleagris_gallopavo
ENSHBUG00000007793	rad54l	99	77.151	ENSMAUG00000020076	Rad54l	99	77.151	Mesocricetus_auratus
ENSHBUG00000007793	rad54l	99	77.346	ENSMICG00000003266	RAD54L	99	77.346	Microcebus_murinus
ENSHBUG00000007793	rad54l	99	77.285	ENSMOCG00000001778	Rad54l	99	77.285	Microtus_ochrogaster
ENSHBUG00000007793	rad54l	99	85.040	ENSMALG00000021148	rad54l	99	85.040	Monopterus_albus
ENSHBUG00000007793	rad54l	99	72.751	MGP_CAROLIEiJ_G0026325	Rad54l	99	72.751	Mus_caroli
ENSHBUG00000007793	rad54l	99	76.676	ENSMUSG00000028702	Rad54l	99	76.676	Mus_musculus
ENSHBUG00000007793	rad54l	99	76.779	MGP_PahariEiJ_G0028657	Rad54l	99	76.779	Mus_pahari
ENSHBUG00000007793	rad54l	99	76.810	MGP_SPRETEiJ_G0027297	Rad54l	99	76.810	Mus_spretus
ENSHBUG00000007793	rad54l	99	76.676	ENSMPUG00000012883	RAD54L	99	76.676	Mustela_putorius_furo
ENSHBUG00000007793	rad54l	99	77.450	ENSMLUG00000003763	RAD54L	99	77.450	Myotis_lucifugus
ENSHBUG00000007793	rad54l	99	77.047	ENSNGAG00000024213	Rad54l	99	77.047	Nannospalax_galili
ENSHBUG00000007793	rad54l	99	77.212	ENSNLEG00000016548	RAD54L	99	77.212	Nomascus_leucogenys
ENSHBUG00000007793	rad54l	95	77.013	ENSMEUG00000006793	RAD54L	100	78.338	Notamacropus_eugenii
ENSHBUG00000007793	rad54l	90	80.139	ENSOPRG00000016016	RAD54L	90	80.139	Ochotona_princeps
ENSHBUG00000007793	rad54l	99	77.480	ENSODEG00000008519	RAD54L	99	77.480	Octodon_degus
ENSHBUG00000007793	rad54l	100	99.188	ENSONIG00000007659	rad54l	100	99.188	Oreochromis_niloticus
ENSHBUG00000007793	rad54l	99	77.346	ENSOCUG00000005229	RAD54L	99	77.346	Oryctolagus_cuniculus
ENSHBUG00000007793	rad54l	100	82.432	ENSORLG00000002958	rad54l	100	82.568	Oryzias_latipes
ENSHBUG00000007793	rad54l	99	82.815	ENSORLG00020006554	rad54l	99	85.735	Oryzias_latipes_hni
ENSHBUG00000007793	rad54l	100	82.568	ENSORLG00015002907	rad54l	100	82.703	Oryzias_latipes_hsok
ENSHBUG00000007793	rad54l	99	83.333	ENSOMEG00000007770	rad54l	99	83.333	Oryzias_melastigma
ENSHBUG00000007793	rad54l	99	76.872	ENSOARG00000002264	RAD54L	99	76.872	Ovis_aries
ENSHBUG00000007793	rad54l	99	77.346	ENSPPAG00000031222	RAD54L	99	77.346	Pan_paniscus
ENSHBUG00000007793	rad54l	99	76.439	ENSPPRG00000010317	RAD54L	99	76.439	Panthera_pardus
ENSHBUG00000007793	rad54l	99	76.439	ENSPTIG00000012200	RAD54L	99	76.439	Panthera_tigris_altaica
ENSHBUG00000007793	rad54l	99	77.346	ENSPTRG00000000689	RAD54L	99	77.346	Pan_troglodytes
ENSHBUG00000007793	rad54l	99	77.212	ENSPANG00000016295	RAD54L	99	77.212	Papio_anubis
ENSHBUG00000007793	rad54l	99	77.038	ENSPKIG00000016172	rad54l	99	77.038	Paramormyrops_kingsleyae
ENSHBUG00000007793	rad54l	99	79.837	ENSPSIG00000003258	RAD54L	99	79.837	Pelodiscus_sinensis
ENSHBUG00000007793	rad54l	99	80.352	ENSPMGG00000016335	rad54l	99	80.352	Periophthalmus_magnuspinnatus
ENSHBUG00000007793	rad54l	99	77.151	ENSPEMG00000011422	Rad54l	99	77.151	Peromyscus_maniculatus_bairdii
ENSHBUG00000007793	rad54l	99	68.826	ENSPMAG00000007719	rad54l	99	68.826	Petromyzon_marinus
ENSHBUG00000007793	rad54l	100	78.629	ENSPCIG00000029032	RAD54L	100	78.629	Phascolarctos_cinereus
ENSHBUG00000007793	rad54l	86	87.107	ENSPFOG00000013732	rad54l	100	87.107	Poecilia_formosa
ENSHBUG00000007793	rad54l	86	83.333	ENSPLAG00000023416	rad54l	99	85.065	Poecilia_latipinna
ENSHBUG00000007793	rad54l	91	85.312	ENSPMEG00000008299	rad54l	100	85.312	Poecilia_mexicana
ENSHBUG00000007793	rad54l	100	84.324	ENSPREG00000019955	rad54l	100	84.324	Poecilia_reticulata
ENSHBUG00000007793	rad54l	99	65.060	ENSPPYG00000001398	RAD54L	99	65.060	Pongo_abelii
ENSHBUG00000007793	rad54l	80	77.778	ENSPCAG00000005323	RAD54L	80	77.778	Procavia_capensis
ENSHBUG00000007793	rad54l	99	76.810	ENSPCOG00000015423	RAD54L	99	76.810	Propithecus_coquereli
ENSHBUG00000007793	rad54l	100	99.583	ENSPNYG00000002942	rad54l	100	99.583	Pundamilia_nyererei
ENSHBUG00000007793	rad54l	100	83.941	ENSPNAG00000012483	rad54l	100	83.941	Pygocentrus_nattereri
ENSHBUG00000007793	rad54l	99	76.810	ENSRNOG00000013148	Rad54l	99	76.810	Rattus_norvegicus
ENSHBUG00000007793	rad54l	99	77.346	ENSRBIG00000043495	RAD54L	99	77.346	Rhinopithecus_bieti
ENSHBUG00000007793	rad54l	99	77.212	ENSRROG00000020844	RAD54L	99	77.212	Rhinopithecus_roxellana
ENSHBUG00000007793	rad54l	84	48.541	YGL163C	RAD54	71	49.767	Saccharomyces_cerevisiae
ENSHBUG00000007793	rad54l	99	77.480	ENSSBOG00000024672	RAD54L	99	77.480	Saimiri_boliviensis_boliviensis
ENSHBUG00000007793	rad54l	100	78.284	ENSSHAG00000000110	RAD54L	100	78.284	Sarcophilus_harrisii
ENSHBUG00000007793	rad54l	100	88.919	ENSSDUG00000019147	rad54l	100	88.919	Seriola_dumerili
ENSHBUG00000007793	rad54l	100	88.919	ENSSLDG00000012330	rad54l	100	88.919	Seriola_lalandi_dorsalis
ENSHBUG00000007793	rad54l	84	77.047	ENSSARG00000006689	RAD54L	100	77.047	Sorex_araneus
ENSHBUG00000007793	rad54l	99	88.315	ENSSPAG00000011016	rad54l	99	88.315	Stegastes_partitus
ENSHBUG00000007793	rad54l	99	77.212	ENSSSCG00000003905	RAD54L	99	77.212	Sus_scrofa
ENSHBUG00000007793	rad54l	99	78.869	ENSTGUG00000008233	RAD54L	99	79.273	Taeniopygia_guttata
ENSHBUG00000007793	rad54l	99	83.287	ENSTRUG00000008410	rad54l	100	83.287	Takifugu_rubripes
ENSHBUG00000007793	rad54l	99	80.217	ENSTNIG00000004716	rad54l	99	80.217	Tetraodon_nigroviridis
ENSHBUG00000007793	rad54l	99	72.691	ENSTTRG00000006315	RAD54L	99	72.691	Tursiops_truncatus
ENSHBUG00000007793	rad54l	99	76.518	ENSUAMG00000011824	RAD54L	99	76.518	Ursus_americanus
ENSHBUG00000007793	rad54l	99	75.304	ENSUMAG00000023603	RAD54L	99	75.304	Ursus_maritimus
ENSHBUG00000007793	rad54l	99	77.212	ENSVVUG00000007201	RAD54L	99	77.212	Vulpes_vulpes
ENSHBUG00000007793	rad54l	96	75.035	ENSXETG00000004369	rad54l	99	75.035	Xenopus_tropicalis
ENSHBUG00000007793	rad54l	55	81.818	ENSXCOG00000016028	rad54l	82	84.392	Xiphophorus_couchianus