EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000007827 (Gene tree)
Gene ID: 102301064
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 2769 bases
Position: chrJH425501.1:701015-703783
Accession: 102301064
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000025691	MMR_HSR1	PF01926.23	9.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000005326	-	1596	XM_005935110	ENSHBUP00000025691	234 (aa)	XP_005935172	UPI00022B3F53

Gene Model

Click here to download ENSHBUG00000007827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000007827's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000007827	zgc:101559	69	35.404	ENSHBUG00000017973	si:ch73-116o1.2	90	34.359
ENSHBUG00000007827	zgc:101559	77	40.331	ENSHBUG00000009947	-	80	40.331
ENSHBUG00000007827	zgc:101559	76	31.461	ENSHBUG00000018763	rras	88	31.461
ENSHBUG00000007827	zgc:101559	85	35.749	ENSHBUG00000009014	-	97	35.749
ENSHBUG00000007827	zgc:101559	58	35.294	ENSHBUG00000007966	rab23	71	35.811
ENSHBUG00000007827	zgc:101559	75	48.295	ENSHBUG00000010304	rab1ab	82	48.295
ENSHBUG00000007827	zgc:101559	77	46.961	ENSHBUG00000002397	-	80	46.961
ENSHBUG00000007827	zgc:101559	70	37.870	ENSHBUG00000009027	-	78	37.870
ENSHBUG00000007827	zgc:101559	77	40.884	ENSHBUG00000014777	rab11bb	80	40.884
ENSHBUG00000007827	zgc:101559	79	43.478	ENSHBUG00000019261	si:dkey-16l2.16	88	42.929
ENSHBUG00000007827	zgc:101559	71	39.157	ENSHBUG00000003876	rab25a	77	39.157
ENSHBUG00000007827	zgc:101559	66	35.669	ENSHBUG00000022669	rab9a	77	35.669
ENSHBUG00000007827	zgc:101559	67	60.248	ENSHBUG00000001714	-	92	49.550
ENSHBUG00000007827	zgc:101559	80	37.766	ENSHBUG00000009333	rab11al	84	37.766
ENSHBUG00000007827	zgc:101559	73	40.936	ENSHBUG00000003752	rab5aa	77	40.936
ENSHBUG00000007827	zgc:101559	74	41.379	ENSHBUG00000015126	rab42a	64	41.379
ENSHBUG00000007827	zgc:101559	73	40.000	ENSHBUG00000022562	-	77	40.000
ENSHBUG00000007827	zgc:101559	72	41.520	ENSHBUG00000003434	rab22a	67	41.520
ENSHBUG00000007827	zgc:101559	85	37.438	ENSHBUG00000014023	si:dkey-13a21.4	95	37.438
ENSHBUG00000007827	zgc:101559	66	43.871	ENSHBUG00000013570	-	72	43.871
ENSHBUG00000007827	zgc:101559	77	39.560	ENSHBUG00000008497	rab12	73	39.560
ENSHBUG00000007827	zgc:101559	63	35.811	ENSHBUG00000007788	rheb	79	35.811
ENSHBUG00000007827	zgc:101559	73	31.765	ENSHBUG00000001462	RAB17	73	31.765
ENSHBUG00000007827	zgc:101559	64	38.961	ENSHBUG00000012594	RAB29	73	38.961
ENSHBUG00000007827	zgc:101559	72	42.262	ENSHBUG00000014338	RAB41	77	42.262
ENSHBUG00000007827	zgc:101559	84	38.119	ENSHBUG00000017297	rab15	91	38.119
ENSHBUG00000007827	zgc:101559	77	36.413	ENSHBUG00000003230	rab6bb	90	36.413
ENSHBUG00000007827	zgc:101559	73	43.023	ENSHBUG00000017620	-	79	43.023
ENSHBUG00000007827	zgc:101559	71	41.317	ENSHBUG00000019164	rab2a	76	41.317
ENSHBUG00000007827	zgc:101559	73	39.181	ENSHBUG00000006823	-	75	39.181
ENSHBUG00000007827	zgc:101559	79	33.333	ENSHBUG00000011998	hrasb	97	33.838
ENSHBUG00000007827	zgc:101559	70	45.122	ENSHBUG00000003728	-	80	45.122
ENSHBUG00000007827	zgc:101559	85	36.715	ENSHBUG00000010852	RAB7A	97	36.715
ENSHBUG00000007827	zgc:101559	76	38.983	ENSHBUG00000023035	rab11a	76	38.983
ENSHBUG00000007827	zgc:101559	73	39.766	ENSHBUG00000002014	rab5c	75	39.766
ENSHBUG00000007827	zgc:101559	77	31.217	ENSHBUG00000018030	nkiras1	80	31.217
ENSHBUG00000007827	zgc:101559	71	40.361	ENSHBUG00000003696	rab18b	79	40.361
ENSHBUG00000007827	zgc:101559	75	37.143	ENSHBUG00000012905	rab6ba	82	37.143
ENSHBUG00000007827	zgc:101559	67	36.306	ENSHBUG00000013197	kras	87	37.059
ENSHBUG00000007827	zgc:101559	69	36.310	ENSHBUG00000013010	rab32b	76	36.310
ENSHBUG00000007827	zgc:101559	70	30.539	ENSHBUG00000001491	dnajc27	61	30.539
ENSHBUG00000007827	zgc:101559	68	49.375	ENSHBUG00000001416	rab35b	97	41.117
ENSHBUG00000007827	zgc:101559	77	64.550	ENSHBUG00000013162	rab33ba	92	64.550
ENSHBUG00000007827	zgc:101559	68	39.634	ENSHBUG00000001595	rab9b	72	39.634
ENSHBUG00000007827	zgc:101559	76	47.753	ENSHBUG00000000993	rab30	77	47.753
ENSHBUG00000007827	zgc:101559	63	40.816	ENSHBUG00000001518	rab18a	71	40.816
ENSHBUG00000007827	zgc:101559	69	43.558	ENSHBUG00000003539	RAB39B	75	43.558
ENSHBUG00000007827	zgc:101559	72	41.071	ENSHBUG00000000890	rab6a	78	41.071
ENSHBUG00000007827	zgc:101559	78	38.251	ENSHBUG00000009320	rab25b	85	38.251
ENSHBUG00000007827	zgc:101559	73	40.000	ENSHBUG00000006056	-	77	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000007827	zgc:101559	100	89.744	ENSAPOG00000007503	zgc:101559	100	89.744	Acanthochromis_polyacanthus
ENSHBUG00000007827	zgc:101559	90	95.238	ENSACIG00000021459	zgc:101559	92	95.238	Amphilophus_citrinellus
ENSHBUG00000007827	zgc:101559	100	89.744	ENSAOCG00000024675	zgc:101559	100	89.744	Amphiprion_ocellaris
ENSHBUG00000007827	zgc:101559	100	89.744	ENSAPEG00000005176	zgc:101559	100	89.744	Amphiprion_percula
ENSHBUG00000007827	zgc:101559	100	88.034	ENSATEG00000007761	zgc:101559	100	88.034	Anabas_testudineus
ENSHBUG00000007827	zgc:101559	98	99.130	ENSACLG00000027006	zgc:101559	97	99.130	Astatotilapia_calliptera
ENSHBUG00000007827	zgc:101559	92	77.828	ENSAMXG00000040460	zgc:101559	88	77.828	Astyanax_mexicanus
ENSHBUG00000007827	zgc:101559	100	81.197	ENSCSEG00000006243	zgc:101559	100	81.197	Cynoglossus_semilaevis
ENSHBUG00000007827	zgc:101559	100	85.043	ENSCVAG00000019227	zgc:101559	100	85.043	Cyprinodon_variegatus
ENSHBUG00000007827	zgc:101559	100	76.596	ENSDARG00000003257	zgc:101559	100	76.596	Danio_rerio
ENSHBUG00000007827	zgc:101559	100	84.615	ENSFHEG00000011483	zgc:101559	100	84.615	Fundulus_heteroclitus
ENSHBUG00000007827	zgc:101559	91	83.099	ENSGMOG00000011665	zgc:101559	100	83.099	Gadus_morhua
ENSHBUG00000007827	zgc:101559	100	82.906	ENSGAFG00000021202	zgc:101559	100	82.906	Gambusia_affinis
ENSHBUG00000007827	zgc:101559	91	85.915	ENSGACG00000001725	zgc:101559	91	85.915	Gasterosteus_aculeatus
ENSHBUG00000007827	zgc:101559	100	76.695	ENSHCOG00000009133	zgc:101559	100	78.151	Hippocampus_comes
ENSHBUG00000007827	zgc:101559	100	70.085	ENSIPUG00000022394	zgc:101559	100	70.085	Ictalurus_punctatus
ENSHBUG00000007827	zgc:101559	100	82.553	ENSKMAG00000002862	zgc:101559	100	82.553	Kryptolebias_marmoratus
ENSHBUG00000007827	zgc:101559	100	89.316	ENSLBEG00000025798	zgc:101559	100	89.316	Labrus_bergylta
ENSHBUG00000007827	zgc:101559	86	67.164	ENSLACG00000011557	zgc:101559	87	67.164	Latimeria_chalumnae
ENSHBUG00000007827	zgc:101559	100	70.513	ENSLOCG00000005904	zgc:101559	99	70.513	Lepisosteus_oculatus
ENSHBUG00000007827	zgc:101559	100	89.744	ENSMAMG00000017431	zgc:101559	100	89.744	Mastacembelus_armatus
ENSHBUG00000007827	zgc:101559	100	100.000	ENSMZEG00005021778	zgc:101559	100	100.000	Maylandia_zebra
ENSHBUG00000007827	zgc:101559	100	84.188	ENSMMOG00000019779	zgc:101559	100	84.188	Mola_mola
ENSHBUG00000007827	zgc:101559	100	84.615	ENSMALG00000003712	zgc:101559	100	84.615	Monopterus_albus
ENSHBUG00000007827	zgc:101559	100	99.145	ENSNBRG00000002684	zgc:101559	100	99.145	Neolamprologus_brichardi
ENSHBUG00000007827	zgc:101559	100	100.000	ENSONIG00000006715	-	100	100.000	Oreochromis_niloticus
ENSHBUG00000007827	zgc:101559	100	83.333	ENSORLG00000030642	zgc:101559	100	83.333	Oryzias_latipes
ENSHBUG00000007827	zgc:101559	100	82.479	ENSORLG00020012685	zgc:101559	100	82.479	Oryzias_latipes_hni
ENSHBUG00000007827	zgc:101559	100	82.906	ENSORLG00015016047	zgc:101559	100	82.906	Oryzias_latipes_hsok
ENSHBUG00000007827	zgc:101559	100	85.043	ENSOMEG00000013128	zgc:101559	100	85.043	Oryzias_melastigma
ENSHBUG00000007827	zgc:101559	96	71.429	ENSPKIG00000013397	zgc:101559	94	71.429	Paramormyrops_kingsleyae
ENSHBUG00000007827	zgc:101559	100	85.043	ENSPFOG00000009101	-	100	85.043	Poecilia_formosa
ENSHBUG00000007827	zgc:101559	100	85.043	ENSPLAG00000020627	zgc:101559	100	85.043	Poecilia_latipinna
ENSHBUG00000007827	zgc:101559	100	85.043	ENSPMEG00000010152	zgc:101559	100	85.043	Poecilia_mexicana
ENSHBUG00000007827	zgc:101559	100	84.615	ENSPREG00000007017	zgc:101559	100	84.615	Poecilia_reticulata
ENSHBUG00000007827	zgc:101559	100	100.000	ENSPNYG00000012922	zgc:101559	100	100.000	Pundamilia_nyererei
ENSHBUG00000007827	zgc:101559	99	75.536	ENSPNAG00000017856	zgc:101559	100	75.536	Pygocentrus_nattereri
ENSHBUG00000007827	zgc:101559	99	69.528	ENSSFOG00015006175	zgc:101559	100	69.528	Scleropages_formosus
ENSHBUG00000007827	zgc:101559	99	83.691	ENSSMAG00000002229	zgc:101559	99	83.691	Scophthalmus_maximus
ENSHBUG00000007827	zgc:101559	100	90.598	ENSSDUG00000008151	zgc:101559	100	90.598	Seriola_dumerili
ENSHBUG00000007827	zgc:101559	100	90.598	ENSSLDG00000019214	zgc:101559	100	90.598	Seriola_lalandi_dorsalis
ENSHBUG00000007827	zgc:101559	100	91.453	ENSSPAG00000006404	zgc:101559	100	91.453	Stegastes_partitus
ENSHBUG00000007827	zgc:101559	100	81.624	ENSTRUG00000009903	zgc:101559	100	81.624	Takifugu_rubripes
ENSHBUG00000007827	zgc:101559	93	82.028	ENSTNIG00000015000	zgc:101559	92	82.028	Tetraodon_nigroviridis
ENSHBUG00000007827	zgc:101559	100	84.615	ENSXCOG00000018683	zgc:101559	100	84.615	Xiphophorus_couchianus
ENSHBUG00000007827	zgc:101559	100	84.615	ENSXMAG00000011171	zgc:101559	100	84.615	Xiphophorus_maculatus