EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000008208 (Gene tree)
Gene ID: 102289414
Gene Symbol: rbck1
Alias: zgc:91964
Full Name: RANBP2-type and C3HC4-type zinc finger containing 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 9993 bases
Position: chrJH425431.1:1322751-1332743
Accession: 102289414
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000006762	zf-RanBP	PF00641.18	3.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000004768	-	5115	XM_005929746	ENSHBUP00000006762	519 (aa)	XP_005929808	UPI0003BD7BCA

Gene Model

Click here to download ENSHBUG00000008208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000008208's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000008208	rbck1	98	44.630	ENSHBUG00000021933	shrprbck1r	76	44.074

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000008208	rbck1	100	99.422	ENSACLG00000020380	rbck1	100	99.422	Astatotilapia_calliptera
ENSHBUG00000008208	rbck1	98	58.835	ENSAMXG00000004941	rbck1	98	58.880	Astyanax_mexicanus
ENSHBUG00000008208	rbck1	100	76.731	ENSCVAG00000002649	rbck1	100	76.731	Cyprinodon_variegatus
ENSHBUG00000008208	rbck1	98	64.078	ENSELUG00000022786	rbck1	96	63.883	Esox_lucius
ENSHBUG00000008208	rbck1	100	78.077	ENSFHEG00000016918	rbck1	100	77.692	Fundulus_heteroclitus
ENSHBUG00000008208	rbck1	100	99.615	ENSMZEG00005005317	rbck1	100	99.615	Maylandia_zebra
ENSHBUG00000008208	rbck1	84	95.872	ENSNBRG00000006179	rbck1	91	95.872	Neolamprologus_brichardi
ENSHBUG00000008208	rbck1	98	96.252	ENSONIG00000006803	rbck1	99	96.252	Oreochromis_niloticus
ENSHBUG00000008208	rbck1	99	97.860	ENSPNYG00000012666	rbck1	99	97.860	Pundamilia_nyererei
ENSHBUG00000008208	rbck1	100	81.714	ENSSDUG00000023631	rbck1	100	81.939	Seriola_dumerili
ENSHBUG00000008208	rbck1	100	81.679	ENSSLDG00000008305	rbck1	100	81.179	Seriola_lalandi_dorsalis
ENSHBUG00000008208	rbck1	99	81.382	ENSSPAG00000009432	rbck1	100	81.262	Stegastes_partitus