EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000008347 (Gene tree)
Gene ID: 102295263
Gene Symbol: zc3hc1
Alias: zgc:154099
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 3306 bases
Position: chrJH425406.1:971725-975030
Accession: 102295263
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000006894	zf-C3HC	PF07967.13	2.3e-34	1	1
ENSHBUP00000006894	Rsm1	PF08600.10	8.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000004541	-	1590	XM_005927194	ENSHBUP00000006894	498 (aa)	XP_005927256	UPI0003BDA8F5

Gene Model

Click here to download ENSHBUG00000008347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000008347's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000008347	zc3hc1	94	43.388	ENSG00000091732	ZC3HC1	95	44.008	Homo_sapiens
ENSHBUG00000008347	zc3hc1	100	83.600	ENSAPOG00000009078	zc3hc1	100	83.600	Acanthochromis_polyacanthus
ENSHBUG00000008347	zc3hc1	94	43.177	ENSAMEG00000005425	ZC3HC1	94	43.788	Ailuropoda_melanoleuca
ENSHBUG00000008347	zc3hc1	100	89.442	ENSACIG00000019513	zc3hc1	100	89.442	Amphilophus_citrinellus
ENSHBUG00000008347	zc3hc1	100	82.000	ENSAOCG00000024310	zc3hc1	100	82.200	Amphiprion_ocellaris
ENSHBUG00000008347	zc3hc1	100	81.400	ENSAPEG00000004907	zc3hc1	100	81.600	Amphiprion_percula
ENSHBUG00000008347	zc3hc1	87	82.217	ENSATEG00000016898	zc3hc1	90	82.217	Anabas_testudineus
ENSHBUG00000008347	zc3hc1	86	43.400	ENSAPLG00000003832	ZC3HC1	96	43.400	Anas_platyrhynchos
ENSHBUG00000008347	zc3hc1	97	43.327	ENSACAG00000001638	ZC3HC1	97	43.327	Anolis_carolinensis
ENSHBUG00000008347	zc3hc1	94	41.331	ENSANAG00000022213	ZC3HC1	92	45.210	Aotus_nancymaae
ENSHBUG00000008347	zc3hc1	91	99.780	ENSACLG00000025033	zc3hc1	99	99.780	Astatotilapia_calliptera
ENSHBUG00000008347	zc3hc1	95	54.526	ENSAMXG00000036792	zc3hc1	97	54.526	Astyanax_mexicanus
ENSHBUG00000008347	zc3hc1	96	43.825	ENSBTAG00000011247	ZC3HC1	96	44.578	Bos_taurus
ENSHBUG00000008347	zc3hc1	94	42.915	ENSCJAG00000010536	ZC3HC1	92	46.646	Callithrix_jacchus
ENSHBUG00000008347	zc3hc1	94	43.089	ENSCAFG00000001499	-	92	43.293	Canis_familiaris
ENSHBUG00000008347	zc3hc1	94	42.945	ENSCAFG00000029401	-	92	43.149	Canis_familiaris
ENSHBUG00000008347	zc3hc1	94	42.945	ENSCAFG00000028735	-	94	43.149	Canis_familiaris
ENSHBUG00000008347	zc3hc1	94	43.354	ENSCAFG00000031850	-	94	43.558	Canis_familiaris
ENSHBUG00000008347	zc3hc1	94	43.149	ENSCAFG00020006829	-	94	43.354	Canis_lupus_dingo
ENSHBUG00000008347	zc3hc1	94	42.159	ENSCAFG00020023333	-	94	42.363	Canis_lupus_dingo
ENSHBUG00000008347	zc3hc1	95	38.922	ENSCHIG00000014103	ZC3HC1	96	39.679	Capra_hircus
ENSHBUG00000008347	zc3hc1	94	42.566	ENSTSYG00000002843	ZC3HC1	94	42.536	Carlito_syrichta
ENSHBUG00000008347	zc3hc1	87	37.416	ENSCAPG00000016300	ZC3HC1	93	39.130	Cavia_aperea
ENSHBUG00000008347	zc3hc1	94	43.648	ENSCPOG00000014034	ZC3HC1	93	47.484	Cavia_porcellus
ENSHBUG00000008347	zc3hc1	94	31.187	ENSCCAG00000020384	ZC3HC1	98	37.551	Cebus_capucinus
ENSHBUG00000008347	zc3hc1	94	42.713	ENSCATG00000023130	ZC3HC1	98	42.740	Cercocebus_atys
ENSHBUG00000008347	zc3hc1	82	33.575	ENSCLAG00000008260	ZC3HC1	87	33.575	Chinchilla_lanigera
ENSHBUG00000008347	zc3hc1	73	39.474	ENSCSAG00000009881	ZC3HC1	96	40.263	Chlorocebus_sabaeus
ENSHBUG00000008347	zc3hc1	87	45.333	ENSCHOG00000011846	ZC3HC1	95	45.333	Choloepus_hoffmanni
ENSHBUG00000008347	zc3hc1	96	44.779	ENSCPBG00000017519	ZC3HC1	96	44.758	Chrysemys_picta_bellii
ENSHBUG00000008347	zc3hc1	94	42.740	ENSCANG00000029091	ZC3HC1	92	45.427	Colobus_angolensis_palliatus
ENSHBUG00000008347	zc3hc1	94	43.532	ENSCGRG00001018805	Zc3hc1	93	45.897	Cricetulus_griseus_chok1gshd
ENSHBUG00000008347	zc3hc1	94	42.505	ENSCGRG00000017114	Zc3hc1	94	42.505	Cricetulus_griseus_crigri
ENSHBUG00000008347	zc3hc1	100	75.100	ENSCSEG00000009284	zc3hc1	98	75.100	Cynoglossus_semilaevis
ENSHBUG00000008347	zc3hc1	99	73.038	ENSCVAG00000011566	zc3hc1	99	73.038	Cyprinodon_variegatus
ENSHBUG00000008347	zc3hc1	100	62.574	ENSDARG00000062651	zc3hc1	100	62.574	Danio_rerio
ENSHBUG00000008347	zc3hc1	94	43.149	ENSDNOG00000045016	ZC3HC1	94	43.149	Dasypus_novemcinctus
ENSHBUG00000008347	zc3hc1	83	43.891	ENSDORG00000008697	Zc3hc1	87	47.687	Dipodomys_ordii
ENSHBUG00000008347	zc3hc1	87	45.233	ENSEASG00005008789	ZC3HC1	92	46.325	Equus_asinus_asinus
ENSHBUG00000008347	zc3hc1	94	43.177	ENSECAG00000017886	ZC3HC1	94	43.788	Equus_caballus
ENSHBUG00000008347	zc3hc1	64	48.824	ENSEEUG00000003123	ZC3HC1	65	48.824	Erinaceus_europaeus
ENSHBUG00000008347	zc3hc1	99	63.189	ENSELUG00000023168	zc3hc1	99	63.851	Esox_lucius
ENSHBUG00000008347	zc3hc1	94	43.149	ENSFCAG00000010429	ZC3HC1	92	46.341	Felis_catus
ENSHBUG00000008347	zc3hc1	86	42.163	ENSFALG00000005006	ZC3HC1	94	42.129	Ficedula_albicollis
ENSHBUG00000008347	zc3hc1	94	42.770	ENSFDAG00000019897	ZC3HC1	94	43.763	Fukomys_damarensis
ENSHBUG00000008347	zc3hc1	99	74.194	ENSFHEG00000020149	zc3hc1	99	74.194	Fundulus_heteroclitus
ENSHBUG00000008347	zc3hc1	99	67.002	ENSGMOG00000002914	zc3hc1	99	67.002	Gadus_morhua
ENSHBUG00000008347	zc3hc1	94	42.915	ENSGALG00000008003	ZC3HC1	95	43.117	Gallus_gallus
ENSHBUG00000008347	zc3hc1	99	76.210	ENSGAFG00000016095	zc3hc1	99	76.210	Gambusia_affinis
ENSHBUG00000008347	zc3hc1	99	76.506	ENSGACG00000019706	zc3hc1	100	76.506	Gasterosteus_aculeatus
ENSHBUG00000008347	zc3hc1	77	43.142	ENSGAGG00000016106	ZC3HC1	99	44.361	Gopherus_agassizii
ENSHBUG00000008347	zc3hc1	94	43.595	ENSGGOG00000015504	ZC3HC1	92	46.037	Gorilla_gorilla
ENSHBUG00000008347	zc3hc1	94	42.945	ENSHGLG00000005085	ZC3HC1	94	44.148	Heterocephalus_glaber_female
ENSHBUG00000008347	zc3hc1	94	43.033	ENSHGLG00100011395	ZC3HC1	94	44.239	Heterocephalus_glaber_male
ENSHBUG00000008347	zc3hc1	100	70.482	ENSHCOG00000014309	zc3hc1	100	70.482	Hippocampus_comes
ENSHBUG00000008347	zc3hc1	94	41.922	ENSSTOG00000023599	-	94	42.536	Ictidomys_tridecemlineatus
ENSHBUG00000008347	zc3hc1	100	76.553	ENSKMAG00000015315	zc3hc1	93	76.553	Kryptolebias_marmoratus
ENSHBUG00000008347	zc3hc1	100	75.198	ENSLBEG00000017325	zc3hc1	100	75.198	Labrus_bergylta
ENSHBUG00000008347	zc3hc1	79	43.468	ENSLACG00000013032	ZC3HC1	97	43.468	Latimeria_chalumnae
ENSHBUG00000008347	zc3hc1	99	53.216	ENSLOCG00000015963	zc3hc1	99	53.216	Lepisosteus_oculatus
ENSHBUG00000008347	zc3hc1	94	41.988	ENSLAFG00000001292	ZC3HC1	94	42.596	Loxodonta_africana
ENSHBUG00000008347	zc3hc1	94	42.740	ENSMFAG00000030176	ZC3HC1	98	42.769	Macaca_fascicularis
ENSHBUG00000008347	zc3hc1	94	41.633	ENSMMUG00000006155	ZC3HC1	98	42.769	Macaca_mulatta
ENSHBUG00000008347	zc3hc1	94	42.740	ENSMNEG00000011833	ZC3HC1	98	42.769	Macaca_nemestrina
ENSHBUG00000008347	zc3hc1	94	42.740	ENSMLEG00000027328	ZC3HC1	98	42.769	Mandrillus_leucophaeus
ENSHBUG00000008347	zc3hc1	100	83.832	ENSMAMG00000010691	zc3hc1	100	83.832	Mastacembelus_armatus
ENSHBUG00000008347	zc3hc1	100	99.799	ENSMZEG00005007142	zc3hc1	100	99.799	Maylandia_zebra
ENSHBUG00000008347	zc3hc1	94	41.118	ENSMGAG00000002977	ZC3HC1	95	41.071	Meleagris_gallopavo
ENSHBUG00000008347	zc3hc1	82	40.941	ENSMAUG00000017032	Zc3hc1	90	41.176	Mesocricetus_auratus
ENSHBUG00000008347	zc3hc1	94	42.770	ENSMICG00000009167	ZC3HC1	92	45.122	Microcebus_murinus
ENSHBUG00000008347	zc3hc1	94	43.443	ENSMOCG00000015239	Zc3hc1	93	46.364	Microtus_ochrogaster
ENSHBUG00000008347	zc3hc1	88	76.871	ENSMMOG00000002204	zc3hc1	99	76.871	Mola_mola
ENSHBUG00000008347	zc3hc1	97	33.142	ENSMODG00000014630	ZC3HC1	96	33.586	Monodelphis_domestica
ENSHBUG00000008347	zc3hc1	98	79.388	ENSMALG00000014447	zc3hc1	100	79.800	Monopterus_albus
ENSHBUG00000008347	zc3hc1	95	42.480	MGP_CAROLIEiJ_G0028183	Zc3hc1	93	45.732	Mus_caroli
ENSHBUG00000008347	zc3hc1	95	42.394	ENSMUSG00000039130	Zc3hc1	93	45.897	Mus_musculus
ENSHBUG00000008347	zc3hc1	94	39.264	MGP_PahariEiJ_G0021941	Zc3hc1	92	41.033	Mus_pahari
ENSHBUG00000008347	zc3hc1	95	42.394	MGP_SPRETEiJ_G0029183	Zc3hc1	93	45.897	Mus_spretus
ENSHBUG00000008347	zc3hc1	89	42.888	ENSMPUG00000005297	ZC3HC1	88	43.844	Mustela_putorius_furo
ENSHBUG00000008347	zc3hc1	67	37.360	ENSMLUG00000029228	-	98	37.360	Myotis_lucifugus
ENSHBUG00000008347	zc3hc1	94	43.496	ENSMLUG00000000063	-	94	43.496	Myotis_lucifugus
ENSHBUG00000008347	zc3hc1	95	43.725	ENSNGAG00000019014	Zc3hc1	92	48.615	Nannospalax_galili
ENSHBUG00000008347	zc3hc1	100	98.394	ENSNBRG00000004577	zc3hc1	100	98.394	Neolamprologus_brichardi
ENSHBUG00000008347	zc3hc1	94	43.030	ENSNLEG00000012698	ZC3HC1	94	43.636	Nomascus_leucogenys
ENSHBUG00000008347	zc3hc1	95	43.976	ENSMEUG00000011023	ZC3HC1	95	43.952	Notamacropus_eugenii
ENSHBUG00000008347	zc3hc1	94	41.260	ENSODEG00000014604	ZC3HC1	93	44.753	Octodon_degus
ENSHBUG00000008347	zc3hc1	100	97.791	ENSONIG00000011644	zc3hc1	100	97.791	Oreochromis_niloticus
ENSHBUG00000008347	zc3hc1	88	39.323	ENSOANG00000011460	ZC3HC1	96	39.746	Ornithorhynchus_anatinus
ENSHBUG00000008347	zc3hc1	94	43.293	ENSOCUG00000017137	ZC3HC1	94	43.902	Oryctolagus_cuniculus
ENSHBUG00000008347	zc3hc1	99	76.471	ENSORLG00000014409	zc3hc1	99	76.707	Oryzias_latipes
ENSHBUG00000008347	zc3hc1	99	76.876	ENSORLG00020015874	zc3hc1	99	77.108	Oryzias_latipes_hni
ENSHBUG00000008347	zc3hc1	99	76.065	ENSORLG00015014641	zc3hc1	99	76.305	Oryzias_latipes_hsok
ENSHBUG00000008347	zc3hc1	99	76.065	ENSOMEG00000020604	zc3hc1	98	76.210	Oryzias_melastigma
ENSHBUG00000008347	zc3hc1	99	76.268	ENSOMEG00000000215	zc3hc1	98	76.411	Oryzias_melastigma
ENSHBUG00000008347	zc3hc1	94	37.219	ENSOGAG00000026193	ZC3HC1	94	38.241	Otolemur_garnettii
ENSHBUG00000008347	zc3hc1	94	43.293	ENSOARG00000004907	ZC3HC1	92	44.082	Ovis_aries
ENSHBUG00000008347	zc3hc1	94	43.388	ENSPPAG00000043172	ZC3HC1	95	44.008	Pan_paniscus
ENSHBUG00000008347	zc3hc1	94	42.945	ENSPPRG00000001004	ZC3HC1	92	46.037	Panthera_pardus
ENSHBUG00000008347	zc3hc1	94	43.149	ENSPTIG00000007823	ZC3HC1	92	46.341	Panthera_tigris_altaica
ENSHBUG00000008347	zc3hc1	94	43.595	ENSPTRG00000019685	ZC3HC1	95	44.215	Pan_troglodytes
ENSHBUG00000008347	zc3hc1	94	41.633	ENSPANG00000014229	ZC3HC1	98	42.769	Papio_anubis
ENSHBUG00000008347	zc3hc1	99	52.446	ENSPKIG00000007172	zc3hc1	99	52.446	Paramormyrops_kingsleyae
ENSHBUG00000008347	zc3hc1	87	42.982	ENSPSIG00000016646	ZC3HC1	87	44.150	Pelodiscus_sinensis
ENSHBUG00000008347	zc3hc1	95	68.476	ENSPMGG00000003548	zc3hc1	95	68.476	Periophthalmus_magnuspinnatus
ENSHBUG00000008347	zc3hc1	94	41.443	ENSPEMG00000000514	Zc3hc1	94	42.505	Peromyscus_maniculatus_bairdii
ENSHBUG00000008347	zc3hc1	95	40.404	ENSPCIG00000020619	ZC3HC1	99	41.584	Phascolarctos_cinereus
ENSHBUG00000008347	zc3hc1	99	75.855	ENSPFOG00000003466	zc3hc1	99	75.855	Poecilia_formosa
ENSHBUG00000008347	zc3hc1	99	75.855	ENSPLAG00000022211	zc3hc1	99	75.855	Poecilia_latipinna
ENSHBUG00000008347	zc3hc1	99	75.855	ENSPMEG00000001458	zc3hc1	99	75.855	Poecilia_mexicana
ENSHBUG00000008347	zc3hc1	99	76.056	ENSPREG00000004004	zc3hc1	99	76.056	Poecilia_reticulata
ENSHBUG00000008347	zc3hc1	94	40.326	ENSPPYG00000017998	ZC3HC1	94	40.937	Pongo_abelii
ENSHBUG00000008347	zc3hc1	87	44.000	ENSPCAG00000001182	ZC3HC1	94	44.866	Procavia_capensis
ENSHBUG00000008347	zc3hc1	94	42.331	ENSPCOG00000017354	ZC3HC1	92	45.122	Propithecus_coquereli
ENSHBUG00000008347	zc3hc1	95	40.000	ENSPVAG00000003195	ZC3HC1	95	40.244	Pteropus_vampyrus
ENSHBUG00000008347	zc3hc1	100	99.799	ENSPNYG00000020692	zc3hc1	100	99.799	Pundamilia_nyererei
ENSHBUG00000008347	zc3hc1	98	53.955	ENSPNAG00000020746	zc3hc1	100	53.955	Pygocentrus_nattereri
ENSHBUG00000008347	zc3hc1	94	41.224	ENSRNOG00000010154	Zc3hc1	94	41.429	Rattus_norvegicus
ENSHBUG00000008347	zc3hc1	87	44.444	ENSRBIG00000029409	ZC3HC1	94	48.443	Rhinopithecus_bieti
ENSHBUG00000008347	zc3hc1	94	42.536	ENSRROG00000041831	ZC3HC1	96	42.797	Rhinopithecus_roxellana
ENSHBUG00000008347	zc3hc1	80	53.043	ENSSBOG00000032787	ZC3HC1	91	40.000	Saimiri_boliviensis_boliviensis
ENSHBUG00000008347	zc3hc1	87	43.681	ENSSHAG00000002529	ZC3HC1	93	43.681	Sarcophilus_harrisii
ENSHBUG00000008347	zc3hc1	99	54.902	ENSSFOG00015003667	zc3hc1	95	54.902	Scleropages_formosus
ENSHBUG00000008347	zc3hc1	100	81.800	ENSSMAG00000000647	zc3hc1	90	81.800	Scophthalmus_maximus
ENSHBUG00000008347	zc3hc1	100	85.200	ENSSDUG00000004241	zc3hc1	98	85.200	Seriola_dumerili
ENSHBUG00000008347	zc3hc1	100	85.400	ENSSLDG00000025056	zc3hc1	98	85.400	Seriola_lalandi_dorsalis
ENSHBUG00000008347	zc3hc1	95	39.069	ENSSARG00000012013	ZC3HC1	94	39.474	Sorex_araneus
ENSHBUG00000008347	zc3hc1	81	39.765	ENSSPUG00000000778	ZC3HC1	80	39.953	Sphenodon_punctatus
ENSHBUG00000008347	zc3hc1	100	84.600	ENSSPAG00000020041	zc3hc1	100	84.600	Stegastes_partitus
ENSHBUG00000008347	zc3hc1	96	43.200	ENSSSCG00000016565	ZC3HC1	99	42.928	Sus_scrofa
ENSHBUG00000008347	zc3hc1	99	67.404	ENSTRUG00000020077	zc3hc1	99	67.404	Takifugu_rubripes
ENSHBUG00000008347	zc3hc1	99	69.200	ENSTNIG00000007585	zc3hc1	99	69.979	Tetraodon_nigroviridis
ENSHBUG00000008347	zc3hc1	95	36.437	ENSTBEG00000005216	ZC3HC1	95	36.437	Tupaia_belangeri
ENSHBUG00000008347	zc3hc1	95	42.713	ENSTTRG00000008458	ZC3HC1	99	42.915	Tursiops_truncatus
ENSHBUG00000008347	zc3hc1	94	43.354	ENSUAMG00000020249	ZC3HC1	94	43.967	Ursus_americanus
ENSHBUG00000008347	zc3hc1	94	43.149	ENSUMAG00000009268	ZC3HC1	94	43.763	Ursus_maritimus
ENSHBUG00000008347	zc3hc1	64	41.141	ENSVPAG00000010846	ZC3HC1	63	42.296	Vicugna_pacos
ENSHBUG00000008347	zc3hc1	89	43.629	ENSVVUG00000012386	ZC3HC1	92	43.844	Vulpes_vulpes
ENSHBUG00000008347	zc3hc1	91	40.169	ENSXETG00000033900	zc3hc1	95	40.169	Xenopus_tropicalis
ENSHBUG00000008347	zc3hc1	99	74.245	ENSXCOG00000013570	zc3hc1	99	74.245	Xiphophorus_couchianus
ENSHBUG00000008347	zc3hc1	91	77.925	ENSXMAG00000010979	zc3hc1	97	77.925	Xiphophorus_maculatus