EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000008497 (Gene tree)
Gene ID: 102294839
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 11567 bases
Position: chrJH425387.1:1095625-1107191
Accession: 102294839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000026068	MMR_HSR1	PF01926.23	6.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000004338	-	4788	XM_005924588	ENSHBUP00000026068	243 (aa)	XP_005924650	UPI000329E4E8

Gene Model

Click here to download ENSHBUG00000008497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000008497's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000008497	rab12	67	39.053	ENSHBUG00000012594	RAB29	81	39.053
ENSHBUG00000008497	rab12	67	49.390	ENSHBUG00000003696	rab18b	79	49.390
ENSHBUG00000008497	rab12	65	40.252	ENSHBUG00000012905	rab6ba	84	37.714
ENSHBUG00000008497	rab12	66	35.366	ENSHBUG00000016064	rab34a	61	35.366
ENSHBUG00000008497	rab12	68	36.095	ENSHBUG00000009027	-	80	36.095
ENSHBUG00000008497	rab12	84	39.320	ENSHBUG00000003876	rab25a	96	37.379
ENSHBUG00000008497	rab12	60	38.562	ENSHBUG00000001714	-	63	38.562
ENSHBUG00000008497	rab12	84	38.095	ENSHBUG00000009333	rab11al	76	42.424
ENSHBUG00000008497	rab12	77	45.455	ENSHBUG00000000993	rab30	80	46.409
ENSHBUG00000008497	rab12	69	41.916	ENSHBUG00000019261	si:dkey-16l2.16	78	42.424
ENSHBUG00000008497	rab12	83	35.644	ENSHBUG00000000890	rab6a	76	40.625
ENSHBUG00000008497	rab12	65	35.404	ENSHBUG00000018763	rras	87	35.057
ENSHBUG00000008497	rab12	71	40.462	ENSHBUG00000006056	-	80	40.462
ENSHBUG00000008497	rab12	64	31.210	ENSHBUG00000017973	si:ch73-116o1.2	80	31.548
ENSHBUG00000008497	rab12	74	36.464	ENSHBUG00000001462	RAB17	74	38.012
ENSHBUG00000008497	rab12	84	38.679	ENSHBUG00000009947	-	75	43.636
ENSHBUG00000008497	rab12	70	50.296	ENSHBUG00000010304	rab1ab	83	50.296
ENSHBUG00000008497	rab12	71	45.930	ENSHBUG00000002397	-	81	45.930
ENSHBUG00000008497	rab12	70	42.353	ENSHBUG00000009320	rab25b	82	43.293
ENSHBUG00000008497	rab12	71	38.372	ENSHBUG00000006823	-	75	38.372
ENSHBUG00000008497	rab12	77	37.895	ENSHBUG00000010852	RAB7A	81	37.278
ENSHBUG00000008497	rab12	92	36.709	ENSHBUG00000014777	rab11bb	75	43.636
ENSHBUG00000008497	rab12	67	35.119	ENSHBUG00000022669	rab9a	83	35.119
ENSHBUG00000008497	rab12	83	34.826	ENSHBUG00000003752	rab5aa	81	36.872
ENSHBUG00000008497	rab12	83	38.942	ENSHBUG00000015126	rab42a	71	40.526
ENSHBUG00000008497	rab12	62	31.788	ENSHBUG00000013197	kras	85	32.099
ENSHBUG00000008497	rab12	85	36.321	ENSHBUG00000022562	-	80	40.462
ENSHBUG00000008497	rab12	67	33.929	ENSHBUG00000013010	rab32b	77	33.929
ENSHBUG00000008497	rab12	65	35.220	ENSHBUG00000003434	rab22a	65	35.220
ENSHBUG00000008497	rab12	73	39.560	ENSHBUG00000007827	zgc:101559	77	39.560
ENSHBUG00000008497	rab12	85	38.164	ENSHBUG00000001416	rab35b	92	42.473
ENSHBUG00000008497	rab12	69	38.674	ENSHBUG00000013162	rab33ba	87	38.674
ENSHBUG00000008497	rab12	67	35.119	ENSHBUG00000001595	rab9b	75	35.119
ENSHBUG00000008497	rab12	68	43.452	ENSHBUG00000013570	-	78	43.452
ENSHBUG00000008497	rab12	68	32.335	ENSHBUG00000007788	rheb	89	32.335
ENSHBUG00000008497	rab12	67	48.780	ENSHBUG00000001518	rab18a	79	48.780
ENSHBUG00000008497	rab12	79	40.625	ENSHBUG00000019164	rab2a	92	40.816
ENSHBUG00000008497	rab12	65	39.623	ENSHBUG00000014338	RAB41	73	40.385
ENSHBUG00000008497	rab12	68	37.059	ENSHBUG00000014023	si:dkey-13a21.4	82	37.059
ENSHBUG00000008497	rab12	70	45.029	ENSHBUG00000017297	rab15	80	45.029
ENSHBUG00000008497	rab12	85	39.623	ENSHBUG00000017620	-	84	42.458
ENSHBUG00000008497	rab12	64	40.645	ENSHBUG00000003230	rab6bb	77	40.645
ENSHBUG00000008497	rab12	67	31.902	ENSHBUG00000010964	rabl2	71	31.902
ENSHBUG00000008497	rab12	71	51.744	ENSHBUG00000003728	-	88	51.977
ENSHBUG00000008497	rab12	68	42.515	ENSHBUG00000003539	RAB39B	78	42.515
ENSHBUG00000008497	rab12	68	37.278	ENSHBUG00000009014	-	81	37.278
ENSHBUG00000008497	rab12	77	32.474	ENSHBUG00000007966	rab23	78	33.951
ENSHBUG00000008497	rab12	81	39.423	ENSHBUG00000023035	rab11a	87	39.423
ENSHBUG00000008497	rab12	71	37.572	ENSHBUG00000002014	rab5c	76	37.572

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000008497	rab12	100	80.894	ENSG00000206418	RAB12	91	87.892	Homo_sapiens
ENSHBUG00000008497	rab12	89	78.082	ENSAMEG00000007452	RAB12	94	81.735	Ailuropoda_melanoleuca
ENSHBUG00000008497	rab12	100	98.770	ENSACIG00000020616	rab12	100	98.770	Amphilophus_citrinellus
ENSHBUG00000008497	rab12	100	98.354	ENSAOCG00000002130	rab12	100	98.354	Amphiprion_ocellaris
ENSHBUG00000008497	rab12	100	98.354	ENSAPEG00000013255	rab12	100	98.354	Amphiprion_percula
ENSHBUG00000008497	rab12	100	97.942	ENSATEG00000019683	rab12	100	97.942	Anabas_testudineus
ENSHBUG00000008497	rab12	89	84.932	ENSACAG00000003360	RAB12	86	87.892	Anolis_carolinensis
ENSHBUG00000008497	rab12	100	100.000	ENSACLG00000007696	rab12	100	100.000	Astatotilapia_calliptera
ENSHBUG00000008497	rab12	100	89.837	ENSAMXG00000004882	rab12	100	90.650	Astyanax_mexicanus
ENSHBUG00000008497	rab12	93	85.022	ENSBTAG00000010356	RAB12	91	88.341	Bos_taurus
ENSHBUG00000008497	rab12	93	84.513	ENSCJAG00000015468	RAB12	72	84.082	Callithrix_jacchus
ENSHBUG00000008497	rab12	93	84.581	ENSCAFG00020023721	RAB12	84	84.146	Canis_lupus_dingo
ENSHBUG00000008497	rab12	93	85.022	ENSCHIG00000016103	RAB12	91	88.341	Capra_hircus
ENSHBUG00000008497	rab12	86	85.238	ENSCPOG00000022689	RAB12	100	89.524	Cavia_porcellus
ENSHBUG00000008497	rab12	100	80.816	ENSCCAG00000022862	RAB12	100	84.082	Cebus_capucinus
ENSHBUG00000008497	rab12	91	84.375	ENSCATG00000037784	RAB12	93	87.892	Cercocebus_atys
ENSHBUG00000008497	rab12	84	88.780	ENSCSAG00000017569	RAB12	72	83.871	Chlorocebus_sabaeus
ENSHBUG00000008497	rab12	93	83.700	ENSCPBG00000028375	RAB12	91	88.341	Chrysemys_picta_bellii
ENSHBUG00000008497	rab12	89	84.475	ENSCANG00000031453	RAB12	99	88.128	Colobus_angolensis_palliatus
ENSHBUG00000008497	rab12	93	84.141	ENSCGRG00001006958	Rab12	83	83.333	Cricetulus_griseus_chok1gshd
ENSHBUG00000008497	rab12	100	97.942	ENSCSEG00000016933	rab12	100	97.942	Cynoglossus_semilaevis
ENSHBUG00000008497	rab12	100	97.154	ENSCVAG00000003539	rab12	100	97.154	Cyprinodon_variegatus
ENSHBUG00000008497	rab12	100	88.066	ENSDARG00000089428	rab12	94	94.091	Danio_rerio
ENSHBUG00000008497	rab12	84	88.293	ENSDNOG00000046064	RAB12	51	87.444	Dasypus_novemcinctus
ENSHBUG00000008497	rab12	92	83.260	ENSDORG00000008920	Rab12	98	87.892	Dipodomys_ordii
ENSHBUG00000008497	rab12	78	66.138	ENSEBUG00000006581	rab12	89	67.582	Eptatretus_burgeri
ENSHBUG00000008497	rab12	93	84.141	ENSEASG00005002926	RAB12	83	83.740	Equus_asinus_asinus
ENSHBUG00000008497	rab12	93	84.141	ENSECAG00000007384	RAB12	71	83.740	Equus_caballus
ENSHBUG00000008497	rab12	100	91.358	ENSELUG00000007123	rab12	100	89.300	Esox_lucius
ENSHBUG00000008497	rab12	93	84.581	ENSFCAG00000027710	RAB12	72	84.146	Felis_catus
ENSHBUG00000008497	rab12	100	97.143	ENSFHEG00000004319	rab12	100	97.143	Fundulus_heteroclitus
ENSHBUG00000008497	rab12	86	92.823	ENSGMOG00000012335	rab12	87	91.388	Gadus_morhua
ENSHBUG00000008497	rab12	93	83.772	ENSGALG00000033608	RAB12	89	87.892	Gallus_gallus
ENSHBUG00000008497	rab12	97	87.712	ENSGACG00000016639	rab12	100	93.119	Gasterosteus_aculeatus
ENSHBUG00000008497	rab12	93	83.260	ENSGAGG00000007278	RAB12	91	88.341	Gopherus_agassizii
ENSHBUG00000008497	rab12	97	79.747	ENSHGLG00000006189	RAB12	86	88.235	Heterocephalus_glaber_female
ENSHBUG00000008497	rab12	100	91.770	ENSHCOG00000012376	rab12	100	91.770	Hippocampus_comes
ENSHBUG00000008497	rab12	91	93.665	ENSIPUG00000017401	rab12	90	93.636	Ictalurus_punctatus
ENSHBUG00000008497	rab12	92	82.667	ENSSTOG00000025122	RAB12	96	87.671	Ictidomys_tridecemlineatus
ENSHBUG00000008497	rab12	91	84.375	ENSJJAG00000019064	Rab12	98	87.892	Jaculus_jaculus
ENSHBUG00000008497	rab12	100	93.416	ENSKMAG00000020056	rab12	100	92.181	Kryptolebias_marmoratus
ENSHBUG00000008497	rab12	100	97.531	ENSLBEG00000013756	rab12	100	97.531	Labrus_bergylta
ENSHBUG00000008497	rab12	91	87.892	ENSLACG00000010461	RAB12	90	87.892	Latimeria_chalumnae
ENSHBUG00000008497	rab12	100	83.871	ENSLOCG00000002680	rab12	100	87.903	Lepisosteus_oculatus
ENSHBUG00000008497	rab12	100	81.301	ENSMFAG00000043551	RAB12	100	84.553	Macaca_fascicularis
ENSHBUG00000008497	rab12	84	88.780	ENSMNEG00000040853	RAB12	88	87.892	Macaca_nemestrina
ENSHBUG00000008497	rab12	100	97.942	ENSMAMG00000006862	rab12	100	97.942	Mastacembelus_armatus
ENSHBUG00000008497	rab12	100	100.000	ENSMZEG00005024316	rab12	100	100.000	Maylandia_zebra
ENSHBUG00000008497	rab12	83	84.804	ENSMGAG00000009197	RAB12	100	88.725	Meleagris_gallopavo
ENSHBUG00000008497	rab12	93	84.141	ENSMAUG00000008371	Rab12	83	83.333	Mesocricetus_auratus
ENSHBUG00000008497	rab12	91	83.929	ENSMICG00000030661	RAB12	93	87.444	Microcebus_murinus
ENSHBUG00000008497	rab12	89	84.018	ENSMOCG00000000452	Rab12	100	87.671	Microtus_ochrogaster
ENSHBUG00000008497	rab12	93	85.022	ENSMODG00000021452	RAB12	73	84.553	Monodelphis_domestica
ENSHBUG00000008497	rab12	100	95.062	ENSMALG00000015762	rab12	100	93.827	Monopterus_albus
ENSHBUG00000008497	rab12	93	85.022	MGP_CAROLIEiJ_G0021839	Rab12	84	84.146	Mus_caroli
ENSHBUG00000008497	rab12	93	85.022	ENSMUSG00000023460	Rab12	100	84.146	Mus_musculus
ENSHBUG00000008497	rab12	93	85.022	MGP_PahariEiJ_G0020826	Rab12	100	84.146	Mus_pahari
ENSHBUG00000008497	rab12	93	85.022	MGP_SPRETEiJ_G0022750	Rab12	83	84.146	Mus_spretus
ENSHBUG00000008497	rab12	100	80.488	ENSMLUG00000002883	RAB12	92	87.892	Myotis_lucifugus
ENSHBUG00000008497	rab12	95	81.545	ENSNGAG00000024103	-	95	87.444	Nannospalax_galili
ENSHBUG00000008497	rab12	91	77.232	ENSNGAG00000019722	-	91	77.130	Nannospalax_galili
ENSHBUG00000008497	rab12	100	100.000	ENSNBRG00000014428	rab12	100	100.000	Neolamprologus_brichardi
ENSHBUG00000008497	rab12	100	80.894	ENSNLEG00000006939	RAB12	91	87.892	Nomascus_leucogenys
ENSHBUG00000008497	rab12	100	80.894	ENSMEUG00000000493	RAB12	100	84.146	Notamacropus_eugenii
ENSHBUG00000008497	rab12	89	85.388	ENSODEG00000006414	RAB12	100	89.041	Octodon_degus
ENSHBUG00000008497	rab12	100	99.588	ENSONIG00000018469	rab12	100	99.588	Oreochromis_niloticus
ENSHBUG00000008497	rab12	100	97.942	ENSORLG00000003902	rab12	100	97.942	Oryzias_latipes
ENSHBUG00000008497	rab12	100	97.531	ENSORLG00020005131	rab12	100	97.531	Oryzias_latipes_hni
ENSHBUG00000008497	rab12	100	97.531	ENSORLG00015007869	rab12	100	97.531	Oryzias_latipes_hsok
ENSHBUG00000008497	rab12	100	98.765	ENSOMEG00000008191	rab12	100	98.765	Oryzias_melastigma
ENSHBUG00000008497	rab12	86	84.762	ENSOGAG00000028002	RAB12	99	88.571	Otolemur_garnettii
ENSHBUG00000008497	rab12	79	89.529	ENSOARG00000000728	RAB12	88	87.442	Ovis_aries
ENSHBUG00000008497	rab12	84	84.541	ENSPPAG00000009152	RAB12	97	88.835	Pan_paniscus
ENSHBUG00000008497	rab12	100	80.894	ENSPPRG00000024521	RAB12	91	87.892	Panthera_pardus
ENSHBUG00000008497	rab12	100	80.894	ENSPTRG00000009853	RAB12	91	87.892	Pan_troglodytes
ENSHBUG00000008497	rab12	100	81.377	ENSPANG00000009320	RAB12	90	88.341	Papio_anubis
ENSHBUG00000008497	rab12	100	89.344	ENSPKIG00000008579	rab12	100	89.754	Paramormyrops_kingsleyae
ENSHBUG00000008497	rab12	100	89.712	ENSPMGG00000001890	rab12	100	90.947	Periophthalmus_magnuspinnatus
ENSHBUG00000008497	rab12	93	84.581	ENSPEMG00000021032	Rab12	84	83.740	Peromyscus_maniculatus_bairdii
ENSHBUG00000008497	rab12	93	84.581	ENSPCIG00000010453	RAB12	61	84.146	Phascolarctos_cinereus
ENSHBUG00000008497	rab12	100	96.311	ENSPFOG00000001579	rab12	100	96.311	Poecilia_formosa
ENSHBUG00000008497	rab12	100	96.311	ENSPLAG00000013594	rab12	100	96.311	Poecilia_latipinna
ENSHBUG00000008497	rab12	100	96.311	ENSPMEG00000010417	rab12	100	96.311	Poecilia_mexicana
ENSHBUG00000008497	rab12	100	96.721	ENSPREG00000017487	rab12	100	96.721	Poecilia_reticulata
ENSHBUG00000008497	rab12	93	84.581	ENSPPYG00000009015	-	72	84.146	Pongo_abelii
ENSHBUG00000008497	rab12	100	80.488	ENSPCAG00000015007	RAB12	100	83.740	Procavia_capensis
ENSHBUG00000008497	rab12	100	80.894	ENSPCOG00000019816	RAB12	91	87.892	Propithecus_coquereli
ENSHBUG00000008497	rab12	100	80.488	ENSPVAG00000002757	RAB12	91	87.444	Pteropus_vampyrus
ENSHBUG00000008497	rab12	100	100.000	ENSPNYG00000005654	rab12	100	100.000	Pundamilia_nyererei
ENSHBUG00000008497	rab12	100	100.000	ENSPNYG00000023905	rab12	100	100.000	Pundamilia_nyererei
ENSHBUG00000008497	rab12	100	89.024	ENSPNAG00000015031	rab12	100	89.837	Pygocentrus_nattereri
ENSHBUG00000008497	rab12	93	82.895	ENSRNOG00000019295	Rab12	91	82.456	Rattus_norvegicus
ENSHBUG00000008497	rab12	91	84.375	ENSRBIG00000028760	RAB12	96	87.892	Rhinopithecus_bieti
ENSHBUG00000008497	rab12	91	84.375	ENSRROG00000019249	RAB12	93	87.892	Rhinopithecus_roxellana
ENSHBUG00000008497	rab12	94	79.654	ENSSBOG00000021125	RAB12	80	88.517	Saimiri_boliviensis_boliviensis
ENSHBUG00000008497	rab12	93	84.071	ENSSHAG00000001489	RAB12	100	84.071	Sarcophilus_harrisii
ENSHBUG00000008497	rab12	100	96.708	ENSSMAG00000012678	rab12	100	96.708	Scophthalmus_maximus
ENSHBUG00000008497	rab12	100	98.765	ENSSDUG00000008505	rab12	100	98.765	Seriola_dumerili
ENSHBUG00000008497	rab12	100	98.765	ENSSLDG00000022239	rab12	100	98.765	Seriola_lalandi_dorsalis
ENSHBUG00000008497	rab12	100	81.301	ENSSPUG00000003222	RAB12	100	84.553	Sphenodon_punctatus
ENSHBUG00000008497	rab12	100	98.765	ENSSPAG00000010822	rab12	100	98.765	Stegastes_partitus
ENSHBUG00000008497	rab12	93	85.022	ENSSSCG00000038026	RAB12	91	88.789	Sus_scrofa
ENSHBUG00000008497	rab12	86	88.517	ENSTGUG00000009889	RAB12	89	88.341	Taeniopygia_guttata
ENSHBUG00000008497	rab12	100	93.827	ENSTRUG00000024455	rab12	100	92.593	Takifugu_rubripes
ENSHBUG00000008497	rab12	100	94.650	ENSTNIG00000014859	rab12	100	93.416	Tetraodon_nigroviridis
ENSHBUG00000008497	rab12	89	84.475	ENSTTRG00000008711	RAB12	99	88.128	Tursiops_truncatus
ENSHBUG00000008497	rab12	100	80.894	ENSUAMG00000018092	RAB12	91	87.892	Ursus_americanus
ENSHBUG00000008497	rab12	90	83.710	ENSVVUG00000011748	RAB12	99	87.330	Vulpes_vulpes
ENSHBUG00000008497	rab12	86	89.151	ENSXETG00000004289	rab12	72	89.286	Xenopus_tropicalis
ENSHBUG00000008497	rab12	100	94.672	ENSXCOG00000019310	rab12	100	95.082	Xiphophorus_couchianus
ENSHBUG00000008497	rab12	100	95.902	ENSXMAG00000023617	rab12	100	95.902	Xiphophorus_maculatus