EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000008502 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 1886 bases
Position: chrJH425983.1:175834-177719
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000007024	zf-C2H2	PF00096.26	5.4e-30	1	6
ENSHBUP00000007024	zf-C2H2	PF00096.26	5.4e-30	2	6
ENSHBUP00000007024	zf-C2H2	PF00096.26	5.4e-30	3	6
ENSHBUP00000007024	zf-C2H2	PF00096.26	5.4e-30	4	6
ENSHBUP00000007024	zf-C2H2	PF00096.26	5.4e-30	5	6
ENSHBUP00000007024	zf-C2H2	PF00096.26	5.4e-30	6	6
ENSHBUP00000007024	zf-met	PF12874.7	1.3e-14	1	3
ENSHBUP00000007024	zf-met	PF12874.7	1.3e-14	2	3
ENSHBUP00000007024	zf-met	PF12874.7	1.3e-14	3	3
ENSHBUP00000007024	zf-C2H2_jaz	PF12171.8	1.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000004320	-	789	-	ENSHBUP00000007024	262 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000008502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000008502's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000008502	-	82	35.196	ENSHBUG00000006656	-	60	35.196
ENSHBUG00000008502	-	86	38.922	ENSHBUG00000016334	-	55	35.789
ENSHBUG00000008502	-	82	44.361	ENSHBUG00000011194	-	78	44.361
ENSHBUG00000008502	-	82	40.964	ENSHBUG00000018885	-	57	40.964
ENSHBUG00000008502	-	83	41.525	ENSHBUG00000019800	-	98	39.726
ENSHBUG00000008502	-	82	41.611	ENSHBUG00000012758	-	87	42.647
ENSHBUG00000008502	-	81	47.500	ENSHBUG00000021906	-	62	47.500
ENSHBUG00000008502	-	82	46.324	ENSHBUG00000006984	-	99	46.324
ENSHBUG00000008502	-	82	43.443	ENSHBUG00000015942	-	95	45.882
ENSHBUG00000008502	-	82	43.210	ENSHBUG00000002393	-	56	43.210
ENSHBUG00000008502	-	84	42.986	ENSHBUG00000000820	-	91	42.986
ENSHBUG00000008502	-	82	42.667	ENSHBUG00000021970	-	83	41.964
ENSHBUG00000008502	-	84	45.116	ENSHBUG00000014725	-	89	45.116
ENSHBUG00000008502	-	93	41.206	ENSHBUG00000001075	-	94	41.395
ENSHBUG00000008502	-	87	41.026	ENSHBUG00000012492	scrt2	55	34.211
ENSHBUG00000008502	-	81	42.105	ENSHBUG00000012230	-	64	42.105
ENSHBUG00000008502	-	82	44.444	ENSHBUG00000002878	-	54	44.444
ENSHBUG00000008502	-	84	38.318	ENSHBUG00000013292	-	61	39.367
ENSHBUG00000008502	-	82	38.916	ENSHBUG00000013296	-	95	38.916
ENSHBUG00000008502	-	96	34.981	ENSHBUG00000000731	-	60	36.444
ENSHBUG00000008502	-	82	44.643	ENSHBUG00000023209	-	93	44.643
ENSHBUG00000008502	-	82	44.388	ENSHBUG00000003165	-	62	44.388
ENSHBUG00000008502	-	84	44.099	ENSHBUG00000000099	-	82	44.099
ENSHBUG00000008502	-	83	43.210	ENSHBUG00000019377	-	61	43.210
ENSHBUG00000008502	-	82	37.500	ENSHBUG00000005895	-	50	37.500
ENSHBUG00000008502	-	81	44.444	ENSHBUG00000002889	-	50	44.444
ENSHBUG00000008502	-	82	39.336	ENSHBUG00000009941	-	60	39.336
ENSHBUG00000008502	-	84	35.338	ENSHBUG00000023375	prdm5	72	35.338
ENSHBUG00000008502	-	82	45.098	ENSHBUG00000017869	-	74	41.799
ENSHBUG00000008502	-	78	43.357	ENSHBUG00000017864	-	81	45.113
ENSHBUG00000008502	-	82	41.772	ENSHBUG00000007764	snai2	59	41.772
ENSHBUG00000008502	-	82	41.294	ENSHBUG00000005848	-	87	41.294
ENSHBUG00000008502	-	84	50.000	ENSHBUG00000003449	-	92	50.000
ENSHBUG00000008502	-	84	41.071	ENSHBUG00000002961	-	95	41.071
ENSHBUG00000008502	-	82	52.703	ENSHBUG00000000146	-	78	52.703
ENSHBUG00000008502	-	92	36.771	ENSHBUG00000012432	-	70	34.524
ENSHBUG00000008502	-	89	40.351	ENSHBUG00000009720	-	61	31.048
ENSHBUG00000008502	-	84	39.241	ENSHBUG00000005726	-	53	40.594
ENSHBUG00000008502	-	82	52.542	ENSHBUG00000021028	-	84	42.553
ENSHBUG00000008502	-	82	42.236	ENSHBUG00000011944	-	55	42.236
ENSHBUG00000008502	-	82	45.977	ENSHBUG00000009274	-	84	45.977
ENSHBUG00000008502	-	81	49.398	ENSHBUG00000012215	-	88	49.398
ENSHBUG00000008502	-	94	42.553	ENSHBUG00000004718	-	87	42.326
ENSHBUG00000008502	-	82	45.833	ENSHBUG00000002526	-	63	45.833
ENSHBUG00000008502	-	87	36.638	ENSHBUG00000009815	znf319b	81	36.638
ENSHBUG00000008502	-	82	45.536	ENSHBUG00000017251	-	100	45.536
ENSHBUG00000008502	-	82	40.196	ENSHBUG00000006238	-	92	40.196
ENSHBUG00000008502	-	81	33.908	ENSHBUG00000014494	-	62	33.908
ENSHBUG00000008502	-	81	46.154	ENSHBUG00000016621	scrt1b	56	46.154
ENSHBUG00000008502	-	83	36.406	ENSHBUG00000019090	ZNF319	89	35.909
ENSHBUG00000008502	-	84	55.000	ENSHBUG00000002320	-	62	55.000
ENSHBUG00000008502	-	82	47.059	ENSHBUG00000020527	-	86	47.059
ENSHBUG00000008502	-	84	40.455	ENSHBUG00000016546	-	63	40.455
ENSHBUG00000008502	-	82	39.462	ENSHBUG00000006662	-	66	39.462
ENSHBUG00000008502	-	81	54.054	ENSHBUG00000007068	-	58	54.054
ENSHBUG00000008502	-	92	39.024	ENSHBUG00000016384	-	87	36.866
ENSHBUG00000008502	-	82	37.173	ENSHBUG00000016927	-	59	37.173
ENSHBUG00000008502	-	82	43.243	ENSHBUG00000013194	-	77	43.243
ENSHBUG00000008502	-	73	36.932	ENSHBUG00000005451	gfi1b	54	36.932
ENSHBUG00000008502	-	91	39.130	ENSHBUG00000004217	-	65	42.424
ENSHBUG00000008502	-	87	44.776	ENSHBUG00000003057	-	94	44.776
ENSHBUG00000008502	-	86	43.721	ENSHBUG00000015166	-	81	43.721
ENSHBUG00000008502	-	82	41.053	ENSHBUG00000012984	-	73	41.053
ENSHBUG00000008502	-	90	41.667	ENSHBUG00000015404	-	67	41.667
ENSHBUG00000008502	-	82	43.165	ENSHBUG00000011725	-	65	43.165
ENSHBUG00000008502	-	82	49.383	ENSHBUG00000018916	-	61	49.383
ENSHBUG00000008502	-	82	35.616	ENSHBUG00000015393	-	75	37.436
ENSHBUG00000008502	-	82	43.137	ENSHBUG00000012007	-	72	43.137
ENSHBUG00000008502	-	81	50.000	ENSHBUG00000021003	-	95	50.000
ENSHBUG00000008502	-	82	39.130	ENSHBUG00000013065	-	54	40.952
ENSHBUG00000008502	-	85	42.202	ENSHBUG00000013264	-	86	42.202
ENSHBUG00000008502	-	85	33.636	ENSHBUG00000004840	znf646	71	31.159
ENSHBUG00000008502	-	82	41.975	ENSHBUG00000002541	-	74	41.975
ENSHBUG00000008502	-	90	43.721	ENSHBUG00000012565	-	91	43.721
ENSHBUG00000008502	-	83	41.772	ENSHBUG00000009837	znf236	62	39.450
ENSHBUG00000008502	-	95	42.143	ENSHBUG00000013490	-	74	41.860
ENSHBUG00000008502	-	83	36.364	ENSHBUG00000004077	-	94	37.383
ENSHBUG00000008502	-	83	41.315	ENSHBUG00000017372	-	91	42.262
ENSHBUG00000008502	-	84	41.204	ENSHBUG00000006250	-	86	43.478
ENSHBUG00000008502	-	82	44.186	ENSHBUG00000006863	-	88	44.186
ENSHBUG00000008502	-	82	48.077	ENSHBUG00000020544	-	84	48.077
ENSHBUG00000008502	-	82	52.055	ENSHBUG00000003529	-	82	52.055
ENSHBUG00000008502	-	82	43.114	ENSHBUG00000022063	-	61	41.279
ENSHBUG00000008502	-	94	44.444	ENSHBUG00000007316	-	72	47.619
ENSHBUG00000008502	-	83	47.561	ENSHBUG00000002307	-	64	47.561
ENSHBUG00000008502	-	82	41.317	ENSHBUG00000013518	-	84	41.317
ENSHBUG00000008502	-	82	37.229	ENSHBUG00000002841	-	79	37.324
ENSHBUG00000008502	-	82	42.326	ENSHBUG00000002533	-	50	43.262
ENSHBUG00000008502	-	83	46.047	ENSHBUG00000002530	-	57	46.047
ENSHBUG00000008502	-	84	43.519	ENSHBUG00000005809	-	97	43.519
ENSHBUG00000008502	-	84	44.907	ENSHBUG00000015719	-	95	44.907
ENSHBUG00000008502	-	82	39.535	ENSHBUG00000013467	-	50	39.535
ENSHBUG00000008502	-	81	44.211	ENSHBUG00000015803	-	87	45.122
ENSHBUG00000008502	-	84	44.828	ENSHBUG00000009953	-	62	44.828
ENSHBUG00000008502	-	82	43.114	ENSHBUG00000013542	-	57	44.103
ENSHBUG00000008502	-	91	38.889	ENSHBUG00000023077	-	50	38.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000008502	-	90	73.413	ENSAPOG00000001563	-	82	65.116	Acanthochromis_polyacanthus
ENSHBUG00000008502	-	90	63.799	ENSACIG00000015411	-	87	63.799	Amphilophus_citrinellus
ENSHBUG00000008502	-	93	70.703	ENSAOCG00000013589	-	96	70.703	Amphiprion_ocellaris
ENSHBUG00000008502	-	93	74.783	ENSAPEG00000022774	-	92	74.783	Amphiprion_percula
ENSHBUG00000008502	-	95	76.263	ENSATEG00000019261	-	86	76.263	Anabas_testudineus
ENSHBUG00000008502	-	99	43.561	ENSACLG00000008606	-	98	43.561	Astatotilapia_calliptera
ENSHBUG00000008502	-	90	98.925	ENSACLG00000008624	-	81	98.925	Astatotilapia_calliptera
ENSHBUG00000008502	-	94	65.283	ENSCSEG00000008903	-	83	67.773	Cynoglossus_semilaevis
ENSHBUG00000008502	-	82	43.357	ENSCVAG00000016534	-	54	43.262	Cyprinodon_variegatus
ENSHBUG00000008502	-	83	63.090	ENSGMOG00000000494	-	98	63.519	Gadus_morhua
ENSHBUG00000008502	-	92	69.922	ENSGAFG00000002659	-	63	69.922	Gambusia_affinis
ENSHBUG00000008502	-	92	74.569	ENSGACG00000001377	-	96	74.569	Gasterosteus_aculeatus
ENSHBUG00000008502	-	94	68.030	ENSHCOG00000000511	-	92	54.286	Hippocampus_comes
ENSHBUG00000008502	-	92	74.359	ENSLBEG00000018509	-	93	74.359	Labrus_bergylta
ENSHBUG00000008502	-	89	73.896	ENSMAMG00000018137	-	68	73.896	Mastacembelus_armatus
ENSHBUG00000008502	-	100	98.485	ENSMZEG00005002583	-	100	98.485	Maylandia_zebra
ENSHBUG00000008502	-	82	71.579	ENSMMOG00000009733	-	78	71.579	Mola_mola
ENSHBUG00000008502	-	84	58.857	ENSMALG00000019991	-	96	58.857	Monopterus_albus
ENSHBUG00000008502	-	100	80.377	ENSNBRG00000008223	-	90	81.070	Neolamprologus_brichardi
ENSHBUG00000008502	-	84	84.937	ENSONIG00000017233	-	99	84.937	Oreochromis_niloticus
ENSHBUG00000008502	-	99	36.585	ENSOMEG00000016463	-	58	39.227	Oryzias_melastigma
ENSHBUG00000008502	-	92	49.801	ENSPMGG00000002384	-	88	49.801	Periophthalmus_magnuspinnatus
ENSHBUG00000008502	-	92	69.141	ENSPFOG00000006287	-	71	69.141	Poecilia_formosa
ENSHBUG00000008502	-	92	69.141	ENSPMEG00000005897	-	65	69.141	Poecilia_mexicana
ENSHBUG00000008502	-	92	64.876	ENSPREG00000021246	-	98	64.876	Poecilia_reticulata
ENSHBUG00000008502	-	100	99.618	ENSPNYG00000023088	-	100	99.618	Pundamilia_nyererei
ENSHBUG00000008502	-	90	74.502	ENSSDUG00000004892	-	60	74.502	Seriola_dumerili
ENSHBUG00000008502	-	84	75.258	ENSSLDG00000005670	-	89	75.258	Seriola_lalandi_dorsalis
ENSHBUG00000008502	-	90	79.327	ENSSPAG00000022219	-	65	79.327	Stegastes_partitus
ENSHBUG00000008502	-	84	76.018	ENSTNIG00000011188	-	99	76.018	Tetraodon_nigroviridis
ENSHBUG00000008502	-	92	69.922	ENSXMAG00000000866	-	59	69.922	Xiphophorus_maculatus