EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000008873 (Gene tree)
Gene ID: 102310566
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 53227 bases
Position: chrJH425443.1:305336-358562
Accession: 102310566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000026252	CPSF_A	PF03178.15	1.5e-84	1	1
ENSHBUP00000007296	CPSF_A	PF03178.15	1.7e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000003884	-	4448	XM_005930768	ENSHBUP00000007296	1140 (aa)	XP_005930830	UPI0003BD139E
ENSHBUT00000003848	-	4540	XM_005930771	ENSHBUP00000026252	1084 (aa)	XP_005930833	UPI0003BD8463

Gene Model

Click here to download ENSHBUG00000008873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000008873's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000008873	ddb1	100	91.404	ENSG00000167986	DDB1	100	95.890	Homo_sapiens
ENSHBUG00000008873	ddb1	98	98.564	ENSAPOG00000005036	ddb1	99	98.571	Acanthochromis_polyacanthus
ENSHBUG00000008873	ddb1	100	91.491	ENSAMEG00000016518	DDB1	100	91.491	Ailuropoda_melanoleuca
ENSHBUG00000008873	ddb1	86	99.082	ENSACIG00000020624	ddb1	99	99.082	Amphilophus_citrinellus
ENSHBUG00000008873	ddb1	100	98.596	ENSAOCG00000003066	ddb1	100	98.596	Amphiprion_ocellaris
ENSHBUG00000008873	ddb1	100	98.596	ENSAPEG00000000092	ddb1	100	98.596	Amphiprion_percula
ENSHBUG00000008873	ddb1	94	98.626	ENSATEG00000020571	ddb1	97	98.605	Anabas_testudineus
ENSHBUG00000008873	ddb1	99	90.599	ENSAPLG00000007174	DDB1	99	89.912	Anas_platyrhynchos
ENSHBUG00000008873	ddb1	100	90.877	ENSACAG00000017758	DDB1	100	90.877	Anolis_carolinensis
ENSHBUG00000008873	ddb1	100	91.404	ENSANAG00000021878	DDB1	100	91.404	Aotus_nancymaae
ENSHBUG00000008873	ddb1	100	100.000	ENSACLG00000012401	ddb1	100	100.000	Astatotilapia_calliptera
ENSHBUG00000008873	ddb1	100	91.404	ENSBTAG00000021569	DDB1	93	91.404	Bos_taurus
ENSHBUG00000008873	ddb1	100	36.927	WBGene00010890	ddb-1	100	36.869	Caenorhabditis_elegans
ENSHBUG00000008873	ddb1	100	91.404	ENSCJAG00000019319	DDB1	100	91.404	Callithrix_jacchus
ENSHBUG00000008873	ddb1	100	91.491	ENSCAFG00000016264	DDB1	100	91.491	Canis_familiaris
ENSHBUG00000008873	ddb1	94	91.721	ENSCAFG00020012722	DDB1	99	91.721	Canis_lupus_dingo
ENSHBUG00000008873	ddb1	100	91.404	ENSCHIG00000014969	DDB1	100	91.404	Capra_hircus
ENSHBUG00000008873	ddb1	100	91.053	ENSTSYG00000008027	DDB1	100	91.053	Carlito_syrichta
ENSHBUG00000008873	ddb1	100	91.052	ENSCAPG00000010786	DDB1	100	91.332	Cavia_aperea
ENSHBUG00000008873	ddb1	100	91.316	ENSCPOG00000009956	DDB1	100	91.316	Cavia_porcellus
ENSHBUG00000008873	ddb1	100	91.404	ENSCCAG00000035883	DDB1	100	91.404	Cebus_capucinus
ENSHBUG00000008873	ddb1	100	88.976	ENSCATG00000044495	DDB1	100	88.976	Cercocebus_atys
ENSHBUG00000008873	ddb1	100	91.404	ENSCLAG00000004126	DDB1	100	91.404	Chinchilla_lanigera
ENSHBUG00000008873	ddb1	100	91.404	ENSCSAG00000006392	DDB1	100	91.404	Chlorocebus_sabaeus
ENSHBUG00000008873	ddb1	88	85.038	ENSCHOG00000011377	DDB1	90	85.038	Choloepus_hoffmanni
ENSHBUG00000008873	ddb1	100	91.228	ENSCPBG00000017728	DDB1	100	91.228	Chrysemys_picta_bellii
ENSHBUG00000008873	ddb1	100	61.545	ENSCING00000007437	-	100	61.545	Ciona_intestinalis
ENSHBUG00000008873	ddb1	99	60.645	ENSCSAVG00000004783	-	100	60.645	Ciona_savignyi
ENSHBUG00000008873	ddb1	100	91.404	ENSCANG00000019948	DDB1	100	91.404	Colobus_angolensis_palliatus
ENSHBUG00000008873	ddb1	100	91.491	ENSCGRG00001016599	Ddb1	100	91.491	Cricetulus_griseus_chok1gshd
ENSHBUG00000008873	ddb1	100	91.491	ENSCGRG00000013427	Ddb1	100	91.491	Cricetulus_griseus_crigri
ENSHBUG00000008873	ddb1	93	98.010	ENSCSEG00000012499	ddb1	99	96.255	Cynoglossus_semilaevis
ENSHBUG00000008873	ddb1	94	97.577	ENSCVAG00000019531	ddb1	99	97.577	Cyprinodon_variegatus
ENSHBUG00000008873	ddb1	100	92.469	ENSDARG00000074431	ddb1	100	92.469	Danio_rerio
ENSHBUG00000008873	ddb1	94	91.721	ENSDNOG00000014884	DDB1	97	91.721	Dasypus_novemcinctus
ENSHBUG00000008873	ddb1	84	95.000	ENSDORG00000000127	Ddb1	100	95.000	Dipodomys_ordii
ENSHBUG00000008873	ddb1	100	60.524	FBgn0260962	pic	100	60.524	Drosophila_melanogaster
ENSHBUG00000008873	ddb1	77	30.065	FBgn0024698	Cpsf160	67	30.065	Drosophila_melanogaster
ENSHBUG00000008873	ddb1	71	94.882	ENSETEG00000001053	-	71	94.882	Echinops_telfairi
ENSHBUG00000008873	ddb1	78	83.690	ENSEBUG00000014593	ddb1	97	83.690	Eptatretus_burgeri
ENSHBUG00000008873	ddb1	100	91.491	ENSEASG00005008184	DDB1	100	91.491	Equus_asinus_asinus
ENSHBUG00000008873	ddb1	100	91.491	ENSECAG00000012136	DDB1	100	91.491	Equus_caballus
ENSHBUG00000008873	ddb1	85	87.710	ENSEEUG00000003194	DDB1	85	87.710	Erinaceus_europaeus
ENSHBUG00000008873	ddb1	100	97.018	ENSELUG00000023868	ddb1	100	97.018	Esox_lucius
ENSHBUG00000008873	ddb1	100	91.491	ENSFCAG00000029716	DDB1	100	91.491	Felis_catus
ENSHBUG00000008873	ddb1	100	90.639	ENSFALG00000011981	DDB1	100	90.639	Ficedula_albicollis
ENSHBUG00000008873	ddb1	100	91.404	ENSFDAG00000005128	DDB1	100	91.404	Fukomys_damarensis
ENSHBUG00000008873	ddb1	90	96.774	ENSFHEG00000022133	ddb1	99	96.774	Fundulus_heteroclitus
ENSHBUG00000008873	ddb1	83	98.662	ENSGMOG00000019386	ddb1	94	98.662	Gadus_morhua
ENSHBUG00000008873	ddb1	100	91.053	ENSGALG00000042333	DDB1	100	91.053	Gallus_gallus
ENSHBUG00000008873	ddb1	94	97.950	ENSGAFG00000013142	ddb1	99	97.950	Gambusia_affinis
ENSHBUG00000008873	ddb1	96	97.159	ENSGACG00000017182	ddb1	100	97.159	Gasterosteus_aculeatus
ENSHBUG00000008873	ddb1	100	91.052	ENSGAGG00000014124	DDB1	100	91.052	Gopherus_agassizii
ENSHBUG00000008873	ddb1	100	91.404	ENSGGOG00000004052	DDB1	100	91.404	Gorilla_gorilla
ENSHBUG00000008873	ddb1	100	91.316	ENSHGLG00000018430	DDB1	100	91.316	Heterocephalus_glaber_female
ENSHBUG00000008873	ddb1	100	90.351	ENSHGLG00100014475	DDB1	100	90.351	Heterocephalus_glaber_male
ENSHBUG00000008873	ddb1	94	97.955	ENSHCOG00000018670	ddb1	98	97.955	Hippocampus_comes
ENSHBUG00000008873	ddb1	100	95.965	ENSIPUG00000005612	DDB1	100	95.965	Ictalurus_punctatus
ENSHBUG00000008873	ddb1	100	91.404	ENSSTOG00000007552	DDB1	100	91.404	Ictidomys_tridecemlineatus
ENSHBUG00000008873	ddb1	100	91.316	ENSJJAG00000017769	Ddb1	100	91.316	Jaculus_jaculus
ENSHBUG00000008873	ddb1	94	98.043	ENSKMAG00000002315	ddb1	99	98.043	Kryptolebias_marmoratus
ENSHBUG00000008873	ddb1	85	98.701	ENSLBEG00000017065	ddb1	99	98.751	Labrus_bergylta
ENSHBUG00000008873	ddb1	100	90.981	ENSLACG00000017611	DDB1	100	90.981	Latimeria_chalumnae
ENSHBUG00000008873	ddb1	92	87.676	ENSLOCG00000000012	ddb1	100	87.676	Lepisosteus_oculatus
ENSHBUG00000008873	ddb1	100	91.316	ENSLAFG00000011513	DDB1	100	91.316	Loxodonta_africana
ENSHBUG00000008873	ddb1	100	91.404	ENSMFAG00000042035	DDB1	100	91.404	Macaca_fascicularis
ENSHBUG00000008873	ddb1	99	91.424	ENSMMUG00000002691	DDB1	99	91.424	Macaca_mulatta
ENSHBUG00000008873	ddb1	100	91.404	ENSMNEG00000031559	DDB1	100	91.404	Macaca_nemestrina
ENSHBUG00000008873	ddb1	100	91.404	ENSMLEG00000044136	DDB1	100	91.404	Mandrillus_leucophaeus
ENSHBUG00000008873	ddb1	100	99.035	ENSMAMG00000014372	ddb1	100	99.035	Mastacembelus_armatus
ENSHBUG00000008873	ddb1	100	99.912	ENSMZEG00005013835	ddb1	100	99.912	Maylandia_zebra
ENSHBUG00000008873	ddb1	99	90.317	ENSMGAG00000004990	DDB1	100	90.317	Meleagris_gallopavo
ENSHBUG00000008873	ddb1	100	91.491	ENSMAUG00000012926	Ddb1	100	91.491	Mesocricetus_auratus
ENSHBUG00000008873	ddb1	100	91.579	ENSMICG00000013703	DDB1	100	91.579	Microcebus_murinus
ENSHBUG00000008873	ddb1	100	91.316	ENSMOCG00000020499	Ddb1	100	91.316	Microtus_ochrogaster
ENSHBUG00000008873	ddb1	86	98.878	ENSMMOG00000001758	ddb1	99	98.878	Mola_mola
ENSHBUG00000008873	ddb1	100	82.612	ENSMODG00000020353	DDB1	100	82.612	Monodelphis_domestica
ENSHBUG00000008873	ddb1	100	98.947	ENSMALG00000014071	ddb1	100	98.947	Monopterus_albus
ENSHBUG00000008873	ddb1	100	91.491	MGP_CAROLIEiJ_G0022695	Ddb1	100	91.491	Mus_caroli
ENSHBUG00000008873	ddb1	100	91.579	ENSMUSG00000024740	Ddb1	100	91.579	Mus_musculus
ENSHBUG00000008873	ddb1	100	91.491	MGP_PahariEiJ_G0014189	Ddb1	100	91.491	Mus_pahari
ENSHBUG00000008873	ddb1	100	91.579	MGP_SPRETEiJ_G0023609	Ddb1	100	91.579	Mus_spretus
ENSHBUG00000008873	ddb1	100	88.333	ENSMPUG00000014200	DDB1	100	88.333	Mustela_putorius_furo
ENSHBUG00000008873	ddb1	100	91.579	ENSMLUG00000013232	DDB1	100	91.579	Myotis_lucifugus
ENSHBUG00000008873	ddb1	100	91.404	ENSNGAG00000009384	Ddb1	100	91.404	Nannospalax_galili
ENSHBUG00000008873	ddb1	100	99.912	ENSNBRG00000019581	ddb1	100	99.912	Neolamprologus_brichardi
ENSHBUG00000008873	ddb1	100	88.542	ENSNLEG00000002022	DDB1	100	88.542	Nomascus_leucogenys
ENSHBUG00000008873	ddb1	91	93.662	ENSMEUG00000001099	DDB1	93	93.662	Notamacropus_eugenii
ENSHBUG00000008873	ddb1	95	82.832	ENSOPRG00000008254	DDB1	90	82.832	Ochotona_princeps
ENSHBUG00000008873	ddb1	100	91.491	ENSODEG00000002419	DDB1	100	91.491	Octodon_degus
ENSHBUG00000008873	ddb1	100	99.912	ENSONIG00000005804	ddb1	100	99.912	Oreochromis_niloticus
ENSHBUG00000008873	ddb1	95	91.279	ENSOANG00000004897	DDB1	100	91.279	Ornithorhynchus_anatinus
ENSHBUG00000008873	ddb1	100	91.404	ENSOCUG00000001667	DDB1	100	91.404	Oryctolagus_cuniculus
ENSHBUG00000008873	ddb1	96	96.334	ENSORLG00000001399	ddb1	98	97.598	Oryzias_latipes
ENSHBUG00000008873	ddb1	96	96.242	ENSORLG00020001277	ddb1	97	96.242	Oryzias_latipes_hni
ENSHBUG00000008873	ddb1	94	97.488	ENSORLG00015002080	ddb1	99	97.488	Oryzias_latipes_hsok
ENSHBUG00000008873	ddb1	96	95.989	ENSOMEG00000006181	ddb1	99	95.989	Oryzias_melastigma
ENSHBUG00000008873	ddb1	100	91.579	ENSOGAG00000016103	DDB1	100	91.579	Otolemur_garnettii
ENSHBUG00000008873	ddb1	99	91.630	ENSOARG00000011716	DDB1	98	91.630	Ovis_aries
ENSHBUG00000008873	ddb1	100	91.404	ENSPPAG00000035343	DDB1	100	91.404	Pan_paniscus
ENSHBUG00000008873	ddb1	100	91.491	ENSPPRG00000013300	DDB1	100	91.491	Panthera_pardus
ENSHBUG00000008873	ddb1	100	91.236	ENSPTIG00000006909	DDB1	98	91.510	Panthera_tigris_altaica
ENSHBUG00000008873	ddb1	100	91.404	ENSPTRG00000003737	DDB1	100	91.404	Pan_troglodytes
ENSHBUG00000008873	ddb1	100	91.404	ENSPANG00000000242	DDB1	100	91.404	Papio_anubis
ENSHBUG00000008873	ddb1	94	95.993	ENSPKIG00000019213	ddb1	94	95.993	Paramormyrops_kingsleyae
ENSHBUG00000008873	ddb1	100	90.608	ENSPSIG00000013275	DDB1	100	90.658	Pelodiscus_sinensis
ENSHBUG00000008873	ddb1	86	98.367	ENSPMGG00000021179	ddb1	99	98.367	Periophthalmus_magnuspinnatus
ENSHBUG00000008873	ddb1	100	91.491	ENSPEMG00000012241	Ddb1	100	91.491	Peromyscus_maniculatus_bairdii
ENSHBUG00000008873	ddb1	91	86.151	ENSPMAG00000008479	ddb1	100	86.444	Petromyzon_marinus
ENSHBUG00000008873	ddb1	100	91.667	ENSPCIG00000002643	DDB1	100	91.667	Phascolarctos_cinereus
ENSHBUG00000008873	ddb1	100	97.984	ENSPFOG00000002768	ddb1	100	97.984	Poecilia_formosa
ENSHBUG00000008873	ddb1	100	97.807	ENSPLAG00000017227	ddb1	100	97.807	Poecilia_latipinna
ENSHBUG00000008873	ddb1	100	97.807	ENSPMEG00000011398	ddb1	100	97.807	Poecilia_mexicana
ENSHBUG00000008873	ddb1	94	98.047	ENSPREG00000004440	ddb1	98	98.047	Poecilia_reticulata
ENSHBUG00000008873	ddb1	100	87.086	ENSPPYG00000003193	DDB1	100	87.086	Pongo_abelii
ENSHBUG00000008873	ddb1	85	89.403	ENSPCAG00000011040	DDB1	85	89.403	Procavia_capensis
ENSHBUG00000008873	ddb1	100	90.368	ENSPCOG00000015176	DDB1	100	90.368	Propithecus_coquereli
ENSHBUG00000008873	ddb1	100	91.316	ENSPVAG00000003847	DDB1	100	91.316	Pteropus_vampyrus
ENSHBUG00000008873	ddb1	51	98.399	ENSPNYG00000010482	ddb1	100	98.399	Pundamilia_nyererei
ENSHBUG00000008873	ddb1	94	96.365	ENSPNAG00000006635	ddb1	97	96.365	Pygocentrus_nattereri
ENSHBUG00000008873	ddb1	100	91.579	ENSRNOG00000020715	Ddb1	100	91.579	Rattus_norvegicus
ENSHBUG00000008873	ddb1	100	91.404	ENSRBIG00000033611	DDB1	100	91.404	Rhinopithecus_bieti
ENSHBUG00000008873	ddb1	100	91.404	ENSRROG00000041407	DDB1	100	91.404	Rhinopithecus_roxellana
ENSHBUG00000008873	ddb1	100	91.491	ENSSBOG00000019775	DDB1	100	91.491	Saimiri_boliviensis_boliviensis
ENSHBUG00000008873	ddb1	99	89.252	ENSSHAG00000011600	DDB1	100	89.252	Sarcophilus_harrisii
ENSHBUG00000008873	ddb1	94	96.190	ENSSFOG00015011151	ddb1	97	96.190	Scleropages_formosus
ENSHBUG00000008873	ddb1	100	98.524	ENSSMAG00000009495	ddb1	100	98.421	Scophthalmus_maximus
ENSHBUG00000008873	ddb1	100	98.860	ENSSDUG00000004642	ddb1	100	98.860	Seriola_dumerili
ENSHBUG00000008873	ddb1	100	98.860	ENSSLDG00000015804	ddb1	100	98.860	Seriola_lalandi_dorsalis
ENSHBUG00000008873	ddb1	70	94.340	ENSSARG00000003290	-	72	94.340	Sorex_araneus
ENSHBUG00000008873	ddb1	100	91.140	ENSSPUG00000019338	DDB1	100	91.140	Sphenodon_punctatus
ENSHBUG00000008873	ddb1	94	98.512	ENSSPAG00000009888	ddb1	99	98.512	Stegastes_partitus
ENSHBUG00000008873	ddb1	100	90.526	ENSSSCG00000013094	DDB1	100	90.526	Sus_scrofa
ENSHBUG00000008873	ddb1	100	90.702	ENSTGUG00000006414	DDB1	100	90.702	Taeniopygia_guttata
ENSHBUG00000008873	ddb1	94	96.925	ENSTRUG00000016682	ddb1	98	96.925	Takifugu_rubripes
ENSHBUG00000008873	ddb1	92	92.515	ENSTNIG00000009565	ddb1	99	92.515	Tetraodon_nigroviridis
ENSHBUG00000008873	ddb1	94	85.770	ENSTTRG00000011055	DDB1	94	85.770	Tursiops_truncatus
ENSHBUG00000008873	ddb1	94	91.721	ENSUAMG00000017793	DDB1	93	91.721	Ursus_americanus
ENSHBUG00000008873	ddb1	94	91.721	ENSUMAG00000011788	DDB1	98	91.721	Ursus_maritimus
ENSHBUG00000008873	ddb1	91	86.374	ENSVPAG00000007963	DDB1	92	86.891	Vicugna_pacos
ENSHBUG00000008873	ddb1	100	91.491	ENSVVUG00000004987	DDB1	100	91.491	Vulpes_vulpes
ENSHBUG00000008873	ddb1	100	88.636	ENSXETG00000008820	ddb1	100	88.636	Xenopus_tropicalis
ENSHBUG00000008873	ddb1	86	98.163	ENSXCOG00000013956	ddb1	99	98.163	Xiphophorus_couchianus
ENSHBUG00000008873	ddb1	94	97.950	ENSXMAG00000000022	ddb1	99	97.950	Xiphophorus_maculatus