EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000008877 (Gene tree)
Gene ID: 102308641
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 14301 bases
Position: chrJH425331.1:3375632-3389932
Accession: 102308641
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000007396	SpoU_methylase	PF00588.19	1.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000003706	-	4969	XM_005915472	ENSHBUP00000007396	1619 (aa)	XP_005915534	UPI0003BC817C

Gene Model

Click here to download ENSHBUG00000008877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000008877's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000008877	si:dkey-85a20.4	85	46.300	ENSG00000059588	TARBP1	86	46.441	Homo_sapiens
ENSHBUG00000008877	si:dkey-85a20.4	99	81.880	ENSAPOG00000016419	si:dkey-85a20.4	99	81.880	Acanthochromis_polyacanthus
ENSHBUG00000008877	si:dkey-85a20.4	84	45.882	ENSAMEG00000003359	TARBP1	99	45.882	Ailuropoda_melanoleuca
ENSHBUG00000008877	si:dkey-85a20.4	100	77.027	ENSATEG00000020266	si:dkey-85a20.4	100	77.027	Anabas_testudineus
ENSHBUG00000008877	si:dkey-85a20.4	83	47.674	ENSAPLG00000007666	TARBP1	99	47.914	Anas_platyrhynchos
ENSHBUG00000008877	si:dkey-85a20.4	83	43.627	ENSACAG00000001142	TARBP1	86	42.928	Anolis_carolinensis
ENSHBUG00000008877	si:dkey-85a20.4	86	45.352	ENSANAG00000022031	TARBP1	88	45.352	Aotus_nancymaae
ENSHBUG00000008877	si:dkey-85a20.4	78	55.969	ENSBTAG00000004517	TARBP1	92	55.969	Bos_taurus
ENSHBUG00000008877	si:dkey-85a20.4	86	46.181	ENSCJAG00000018155	TARBP1	86	46.111	Callithrix_jacchus
ENSHBUG00000008877	si:dkey-85a20.4	85	45.959	ENSCAFG00000011533	TARBP1	98	45.959	Canis_familiaris
ENSHBUG00000008877	si:dkey-85a20.4	85	46.094	ENSCAFG00020027141	TARBP1	86	46.165	Canis_lupus_dingo
ENSHBUG00000008877	si:dkey-85a20.4	88	44.612	ENSCHIG00000011437	TARBP1	94	43.113	Capra_hircus
ENSHBUG00000008877	si:dkey-85a20.4	82	45.815	ENSTSYG00000010382	TARBP1	99	45.815	Carlito_syrichta
ENSHBUG00000008877	si:dkey-85a20.4	78	42.790	ENSCAPG00000010831	TARBP1	99	42.634	Cavia_aperea
ENSHBUG00000008877	si:dkey-85a20.4	85	45.080	ENSCPOG00000013995	TARBP1	94	42.393	Cavia_porcellus
ENSHBUG00000008877	si:dkey-85a20.4	85	46.317	ENSCCAG00000037278	TARBP1	86	46.371	Cebus_capucinus
ENSHBUG00000008877	si:dkey-85a20.4	86	46.484	ENSCATG00000011754	TARBP1	86	46.484	Cercocebus_atys
ENSHBUG00000008877	si:dkey-85a20.4	80	45.185	ENSCLAG00000003655	TARBP1	96	45.259	Chinchilla_lanigera
ENSHBUG00000008877	si:dkey-85a20.4	79	47.131	ENSCSAG00000010100	TARBP1	99	47.131	Chlorocebus_sabaeus
ENSHBUG00000008877	si:dkey-85a20.4	74	52.922	ENSCPBG00000005587	TARBP1	81	51.156	Chrysemys_picta_bellii
ENSHBUG00000008877	si:dkey-85a20.4	83	46.918	ENSCANG00000034343	TARBP1	99	46.918	Colobus_angolensis_palliatus
ENSHBUG00000008877	si:dkey-85a20.4	85	45.531	ENSCGRG00001016690	Tarbp1	88	45.531	Cricetulus_griseus_chok1gshd
ENSHBUG00000008877	si:dkey-85a20.4	85	45.538	ENSCGRG00000016893	Tarbp1	94	45.429	Cricetulus_griseus_crigri
ENSHBUG00000008877	si:dkey-85a20.4	99	67.449	ENSCSEG00000005255	si:dkey-85a20.4	99	71.078	Cynoglossus_semilaevis
ENSHBUG00000008877	si:dkey-85a20.4	99	56.200	ENSDARG00000079055	si:dkey-85a20.4	99	71.795	Danio_rerio
ENSHBUG00000008877	si:dkey-85a20.4	85	46.503	ENSDNOG00000008637	TARBP1	94	44.186	Dasypus_novemcinctus
ENSHBUG00000008877	si:dkey-85a20.4	80	45.768	ENSDORG00000007984	Tarbp1	100	45.808	Dipodomys_ordii
ENSHBUG00000008877	si:dkey-85a20.4	85	46.624	ENSEASG00005000252	TARBP1	87	46.446	Equus_asinus_asinus
ENSHBUG00000008877	si:dkey-85a20.4	85	46.676	ENSECAG00000023673	TARBP1	86	46.747	Equus_caballus
ENSHBUG00000008877	si:dkey-85a20.4	99	61.425	ENSELUG00000012193	si:dkey-85a20.4	99	61.425	Esox_lucius
ENSHBUG00000008877	si:dkey-85a20.4	85	44.217	ENSFCAG00000014183	TARBP1	85	44.140	Felis_catus
ENSHBUG00000008877	si:dkey-85a20.4	80	47.849	ENSFALG00000013565	TARBP1	99	47.758	Ficedula_albicollis
ENSHBUG00000008877	si:dkey-85a20.4	79	44.219	ENSFDAG00000001308	TARBP1	99	44.369	Fukomys_damarensis
ENSHBUG00000008877	si:dkey-85a20.4	100	62.838	ENSFHEG00000007565	si:dkey-85a20.4	97	77.202	Fundulus_heteroclitus
ENSHBUG00000008877	si:dkey-85a20.4	86	64.656	ENSGMOG00000004549	si:dkey-85a20.4	99	64.281	Gadus_morhua
ENSHBUG00000008877	si:dkey-85a20.4	84	45.323	ENSGALG00000011000	TARBP1	97	46.784	Gallus_gallus
ENSHBUG00000008877	si:dkey-85a20.4	99	73.616	ENSGAFG00000007387	si:dkey-85a20.4	99	73.616	Gambusia_affinis
ENSHBUG00000008877	si:dkey-85a20.4	86	76.549	ENSGACG00000005865	si:dkey-85a20.4	99	76.761	Gasterosteus_aculeatus
ENSHBUG00000008877	si:dkey-85a20.4	83	47.554	ENSGAGG00000012102	TARBP1	89	47.109	Gopherus_agassizii
ENSHBUG00000008877	si:dkey-85a20.4	84	45.448	ENSGGOG00000022879	TARBP1	99	45.448	Gorilla_gorilla
ENSHBUG00000008877	si:dkey-85a20.4	86	45.581	ENSHGLG00000011592	TARBP1	87	45.429	Heterocephalus_glaber_female
ENSHBUG00000008877	si:dkey-85a20.4	85	45.813	ENSHGLG00100015169	TARBP1	95	45.813	Heterocephalus_glaber_male
ENSHBUG00000008877	si:dkey-85a20.4	96	58.327	ENSIPUG00000005249	si:dkey-85a20.4	98	53.486	Ictalurus_punctatus
ENSHBUG00000008877	si:dkey-85a20.4	82	46.379	ENSSTOG00000032291	TARBP1	96	46.452	Ictidomys_tridecemlineatus
ENSHBUG00000008877	si:dkey-85a20.4	83	43.175	ENSJJAG00000017840	Tarbp1	94	43.228	Jaculus_jaculus
ENSHBUG00000008877	si:dkey-85a20.4	89	70.660	ENSKMAG00000017546	si:dkey-85a20.4	97	70.660	Kryptolebias_marmoratus
ENSHBUG00000008877	si:dkey-85a20.4	84	77.822	ENSLBEG00000012132	si:dkey-85a20.4	97	77.822	Labrus_bergylta
ENSHBUG00000008877	si:dkey-85a20.4	99	43.510	ENSLACG00000004337	TARBP1	99	43.690	Latimeria_chalumnae
ENSHBUG00000008877	si:dkey-85a20.4	99	54.468	ENSLOCG00000016214	si:dkey-85a20.4	100	54.406	Lepisosteus_oculatus
ENSHBUG00000008877	si:dkey-85a20.4	85	46.208	ENSLAFG00000011394	TARBP1	88	46.278	Loxodonta_africana
ENSHBUG00000008877	si:dkey-85a20.4	86	45.014	ENSMFAG00000041068	TARBP1	94	43.256	Macaca_fascicularis
ENSHBUG00000008877	si:dkey-85a20.4	86	45.014	ENSMMUG00000021703	TARBP1	86	45.014	Macaca_mulatta
ENSHBUG00000008877	si:dkey-85a20.4	86	46.343	ENSMNEG00000045002	TARBP1	86	46.343	Macaca_nemestrina
ENSHBUG00000008877	si:dkey-85a20.4	83	46.560	ENSMLEG00000044182	TARBP1	99	46.560	Mandrillus_leucophaeus
ENSHBUG00000008877	si:dkey-85a20.4	100	74.201	ENSMAMG00000021760	si:dkey-85a20.4	100	74.201	Mastacembelus_armatus
ENSHBUG00000008877	si:dkey-85a20.4	100	99.506	ENSMZEG00005005751	si:dkey-85a20.4	100	99.506	Maylandia_zebra
ENSHBUG00000008877	si:dkey-85a20.4	85	45.789	ENSMAUG00000020968	Tarbp1	88	45.789	Mesocricetus_auratus
ENSHBUG00000008877	si:dkey-85a20.4	86	42.313	ENSMICG00000015280	TARBP1	94	40.447	Microcebus_murinus
ENSHBUG00000008877	si:dkey-85a20.4	85	44.866	ENSMOCG00000004128	Tarbp1	88	44.866	Microtus_ochrogaster
ENSHBUG00000008877	si:dkey-85a20.4	99	72.665	ENSMMOG00000007795	si:dkey-85a20.4	99	72.727	Mola_mola
ENSHBUG00000008877	si:dkey-85a20.4	83	46.304	ENSMODG00000008504	TARBP1	93	43.219	Monodelphis_domestica
ENSHBUG00000008877	si:dkey-85a20.4	99	75.296	ENSMALG00000002916	si:dkey-85a20.4	99	75.296	Monopterus_albus
ENSHBUG00000008877	si:dkey-85a20.4	85	45.558	MGP_CAROLIEiJ_G0031729	Tarbp1	78	60.536	Mus_caroli
ENSHBUG00000008877	si:dkey-85a20.4	85	45.442	ENSMUSG00000090290	Tarbp1	87	45.442	Mus_musculus
ENSHBUG00000008877	si:dkey-85a20.4	85	45.564	MGP_PahariEiJ_G0023326	Tarbp1	87	45.564	Mus_pahari
ENSHBUG00000008877	si:dkey-85a20.4	85	45.378	MGP_SPRETEiJ_G0032846	Tarbp1	87	45.378	Mus_spretus
ENSHBUG00000008877	si:dkey-85a20.4	77	46.952	ENSMPUG00000002802	TARBP1	99	46.952	Mustela_putorius_furo
ENSHBUG00000008877	si:dkey-85a20.4	83	44.838	ENSMLUG00000002414	TARBP1	99	44.838	Myotis_lucifugus
ENSHBUG00000008877	si:dkey-85a20.4	85	46.366	ENSNLEG00000002518	TARBP1	86	46.295	Nomascus_leucogenys
ENSHBUG00000008877	si:dkey-85a20.4	51	57.021	ENSMEUG00000011370	-	56	57.021	Notamacropus_eugenii
ENSHBUG00000008877	si:dkey-85a20.4	68	54.077	ENSOPRG00000013822	TARBP1	68	54.077	Ochotona_princeps
ENSHBUG00000008877	si:dkey-85a20.4	85	44.742	ENSODEG00000005238	TARBP1	90	44.884	Octodon_degus
ENSHBUG00000008877	si:dkey-85a20.4	86	96.143	ENSONIG00000009789	si:dkey-85a20.4	100	96.143	Oreochromis_niloticus
ENSHBUG00000008877	si:dkey-85a20.4	85	45.148	ENSOCUG00000017418	TARBP1	85	45.339	Oryctolagus_cuniculus
ENSHBUG00000008877	si:dkey-85a20.4	99	69.865	ENSORLG00000010529	si:dkey-85a20.4	99	69.865	Oryzias_latipes
ENSHBUG00000008877	si:dkey-85a20.4	99	69.865	ENSORLG00020019264	si:dkey-85a20.4	99	69.865	Oryzias_latipes_hni
ENSHBUG00000008877	si:dkey-85a20.4	99	69.557	ENSORLG00015003276	si:dkey-85a20.4	99	69.557	Oryzias_latipes_hsok
ENSHBUG00000008877	si:dkey-85a20.4	85	44.239	ENSOGAG00000002379	TARBP1	91	42.677	Otolemur_garnettii
ENSHBUG00000008877	si:dkey-85a20.4	85	45.442	ENSOARG00000003434	TARBP1	92	45.512	Ovis_aries
ENSHBUG00000008877	si:dkey-85a20.4	83	46.710	ENSPPAG00000028097	TARBP1	99	46.710	Pan_paniscus
ENSHBUG00000008877	si:dkey-85a20.4	83	44.396	ENSPPRG00000013561	TARBP1	86	48.214	Panthera_pardus
ENSHBUG00000008877	si:dkey-85a20.4	82	45.693	ENSPTIG00000009281	TARBP1	99	45.693	Panthera_tigris_altaica
ENSHBUG00000008877	si:dkey-85a20.4	85	46.530	ENSPTRG00000002124	TARBP1	86	46.366	Pan_troglodytes
ENSHBUG00000008877	si:dkey-85a20.4	86	46.484	ENSPANG00000021933	TARBP1	86	46.484	Papio_anubis
ENSHBUG00000008877	si:dkey-85a20.4	99	57.524	ENSPKIG00000016716	si:dkey-85a20.4	99	57.524	Paramormyrops_kingsleyae
ENSHBUG00000008877	si:dkey-85a20.4	79	47.126	ENSPSIG00000010699	TARBP1	99	46.973	Pelodiscus_sinensis
ENSHBUG00000008877	si:dkey-85a20.4	85	45.500	ENSPEMG00000006888	Tarbp1	92	45.500	Peromyscus_maniculatus_bairdii
ENSHBUG00000008877	si:dkey-85a20.4	76	69.898	ENSPCIG00000029710	TARBP1	83	69.898	Phascolarctos_cinereus
ENSHBUG00000008877	si:dkey-85a20.4	86	75.250	ENSPFOG00000013020	si:dkey-85a20.4	99	75.250	Poecilia_formosa
ENSHBUG00000008877	si:dkey-85a20.4	99	73.817	ENSPLAG00000006044	si:dkey-85a20.4	99	73.817	Poecilia_latipinna
ENSHBUG00000008877	si:dkey-85a20.4	99	74.001	ENSPMEG00000017857	si:dkey-85a20.4	99	74.001	Poecilia_mexicana
ENSHBUG00000008877	si:dkey-85a20.4	99	73.342	ENSPREG00000022753	si:dkey-85a20.4	100	73.313	Poecilia_reticulata
ENSHBUG00000008877	si:dkey-85a20.4	77	45.899	ENSPPYG00000000102	TARBP1	84	45.899	Pongo_abelii
ENSHBUG00000008877	si:dkey-85a20.4	66	78.231	ENSPCAG00000004808	TARBP1	67	78.231	Procavia_capensis
ENSHBUG00000008877	si:dkey-85a20.4	86	44.507	ENSPCOG00000005666	TARBP1	86	44.507	Propithecus_coquereli
ENSHBUG00000008877	si:dkey-85a20.4	81	60.351	ENSPVAG00000014798	TARBP1	87	40.056	Pteropus_vampyrus
ENSHBUG00000008877	si:dkey-85a20.4	99	93.474	ENSPNYG00000019135	si:dkey-85a20.4	99	93.474	Pundamilia_nyererei
ENSHBUG00000008877	si:dkey-85a20.4	85	43.472	ENSRNOG00000053574	Tarbp1	87	43.472	Rattus_norvegicus
ENSHBUG00000008877	si:dkey-85a20.4	85	44.217	ENSRBIG00000043362	TARBP1	94	44.217	Rhinopithecus_bieti
ENSHBUG00000008877	si:dkey-85a20.4	85	47.009	ENSRROG00000029527	TARBP1	89	47.009	Rhinopithecus_roxellana
ENSHBUG00000008877	si:dkey-85a20.4	83	46.584	ENSSBOG00000034503	TARBP1	96	46.657	Saimiri_boliviensis_boliviensis
ENSHBUG00000008877	si:dkey-85a20.4	83	46.237	ENSSHAG00000000013	TARBP1	99	46.237	Sarcophilus_harrisii
ENSHBUG00000008877	si:dkey-85a20.4	99	54.121	ENSSFOG00015002660	si:dkey-85a20.4	97	61.480	Scleropages_formosus
ENSHBUG00000008877	si:dkey-85a20.4	100	75.681	ENSSMAG00000007081	si:dkey-85a20.4	100	75.983	Scophthalmus_maximus
ENSHBUG00000008877	si:dkey-85a20.4	100	76.724	ENSSDUG00000023566	si:dkey-85a20.4	100	76.724	Seriola_dumerili
ENSHBUG00000008877	si:dkey-85a20.4	99	80.482	ENSSLDG00000020200	si:dkey-85a20.4	100	80.482	Seriola_lalandi_dorsalis
ENSHBUG00000008877	si:dkey-85a20.4	75	58.796	ENSSARG00000012207	TARBP1	76	58.796	Sorex_araneus
ENSHBUG00000008877	si:dkey-85a20.4	86	45.525	ENSSPUG00000015364	TARBP1	97	42.706	Sphenodon_punctatus
ENSHBUG00000008877	si:dkey-85a20.4	99	82.259	ENSSPAG00000007213	si:dkey-85a20.4	99	82.270	Stegastes_partitus
ENSHBUG00000008877	si:dkey-85a20.4	85	46.110	ENSSSCG00000010160	TARBP1	86	46.181	Sus_scrofa
ENSHBUG00000008877	si:dkey-85a20.4	80	47.530	ENSTGUG00000010214	TARBP1	99	47.754	Taeniopygia_guttata
ENSHBUG00000008877	si:dkey-85a20.4	94	67.100	ENSTNIG00000016586	si:dkey-85a20.4	100	73.153	Tetraodon_nigroviridis
ENSHBUG00000008877	si:dkey-85a20.4	79	42.089	ENSTTRG00000008707	TARBP1	85	41.785	Tursiops_truncatus
ENSHBUG00000008877	si:dkey-85a20.4	81	44.856	ENSUMAG00000006730	TARBP1	98	44.856	Ursus_maritimus
ENSHBUG00000008877	si:dkey-85a20.4	63	76.344	ENSVPAG00000007665	TARBP1	73	76.344	Vicugna_pacos
ENSHBUG00000008877	si:dkey-85a20.4	83	46.532	ENSVVUG00000007460	TARBP1	98	48.148	Vulpes_vulpes
ENSHBUG00000008877	si:dkey-85a20.4	83	43.188	ENSXETG00000016224	tarbp1	99	43.188	Xenopus_tropicalis
ENSHBUG00000008877	si:dkey-85a20.4	83	77.702	ENSXCOG00000011779	si:dkey-85a20.4	99	77.702	Xiphophorus_couchianus
ENSHBUG00000008877	si:dkey-85a20.4	64	74.571	ENSXMAG00000009600	si:dkey-85a20.4	100	74.571	Xiphophorus_maculatus