EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000008893 (Gene tree)
Gene ID: 102312587
Gene Symbol: setd1a
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 24731 bases
Position: chrJH425366.1:1110171-1134901
Accession: 102312587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000026321	RRM_1	PF00076.22	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000003689	-	10650	XM_005921817	ENSHBUP00000026321	2199 (aa)	XP_005921879	UPI0003BCE975

Gene Model

Click here to download ENSHBUG00000008893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000008893's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000008893	setd1a	59	65.924	ENSHBUG00000019992	setd1ba	52	66.885

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000008893	setd1a	82	97.512	ENSAPOG00000018002	setd1a	78	97.512	Acanthochromis_polyacanthus
ENSHBUG00000008893	setd1a	77	91.111	ENSACIG00000007144	setd1a	99	93.417	Amphilophus_citrinellus
ENSHBUG00000008893	setd1a	100	89.474	ENSAOCG00000003663	setd1a	100	88.889	Amphiprion_ocellaris
ENSHBUG00000008893	setd1a	100	86.087	ENSATEG00000022798	setd1a	100	85.869	Anabas_testudineus
ENSHBUG00000008893	setd1a	52	78.317	ENSANAG00000021698	-	66	67.105	Aotus_nancymaae
ENSHBUG00000008893	setd1a	100	99.272	ENSACLG00000024747	setd1a	100	99.272	Astatotilapia_calliptera
ENSHBUG00000008893	setd1a	51	79.443	ENSTSYG00000014425	-	58	79.725	Carlito_syrichta
ENSHBUG00000008893	setd1a	50	79.392	ENSCANG00000038478	-	68	79.392	Colobus_angolensis_palliatus
ENSHBUG00000008893	setd1a	100	81.287	ENSCSEG00000021605	setd1a	100	80.297	Cynoglossus_semilaevis
ENSHBUG00000008893	setd1a	100	81.621	ENSCVAG00000011672	setd1a	100	81.530	Cyprinodon_variegatus
ENSHBUG00000008893	setd1a	100	60.777	ENSELUG00000020261	setd1a	72	74.318	Esox_lucius
ENSHBUG00000008893	setd1a	100	71.900	ENSFHEG00000023258	setd1a	96	97.368	Fundulus_heteroclitus
ENSHBUG00000008893	setd1a	60	93.269	ENSGAFG00000011698	setd1a	80	93.269	Gambusia_affinis
ENSHBUG00000008893	setd1a	66	87.584	ENSGACG00000013688	setd1a	83	85.185	Gasterosteus_aculeatus
ENSHBUG00000008893	setd1a	55	81.667	ENSGAGG00000010781	-	71	82.432	Gopherus_agassizii
ENSHBUG00000008893	setd1a	77	85.795	ENSHCOG00000003119	setd1a	100	85.511	Hippocampus_comes
ENSHBUG00000008893	setd1a	100	83.868	ENSKMAG00000009484	setd1a	100	84.424	Kryptolebias_marmoratus
ENSHBUG00000008893	setd1a	69	81.213	ENSLBEG00000004399	setd1a	100	83.565	Labrus_bergylta
ENSHBUG00000008893	setd1a	51	79.392	ENSMNEG00000032572	-	56	79.392	Macaca_nemestrina
ENSHBUG00000008893	setd1a	71	88.825	ENSMAMG00000021851	setd1a	98	87.266	Mastacembelus_armatus
ENSHBUG00000008893	setd1a	100	99.181	ENSMZEG00005023141	setd1a	100	99.181	Maylandia_zebra
ENSHBUG00000008893	setd1a	52	81.757	ENSMAUG00000008959	-	60	81.757	Mesocricetus_auratus
ENSHBUG00000008893	setd1a	74	87.625	ENSMMOG00000016992	setd1a	99	93.123	Mola_mola
ENSHBUG00000008893	setd1a	99	77.974	ENSMALG00000007401	setd1a	98	77.617	Monopterus_albus
ENSHBUG00000008893	setd1a	53	81.419	MGP_CAROLIEiJ_G0030519	-	100	73.096	Mus_caroli
ENSHBUG00000008893	setd1a	51	81.419	ENSMUSG00000042308	Setd1a	100	73.096	Mus_musculus
ENSHBUG00000008893	setd1a	51	81.419	MGP_PahariEiJ_G0013726	-	100	73.096	Mus_pahari
ENSHBUG00000008893	setd1a	53	81.419	MGP_SPRETEiJ_G0031633	Setd1a	100	72.589	Mus_spretus
ENSHBUG00000008893	setd1a	100	93.645	ENSNBRG00000004760	setd1a	100	93.645	Neolamprologus_brichardi
ENSHBUG00000008893	setd1a	51	81.507	ENSMEUG00000003396	-	57	80.743	Notamacropus_eugenii
ENSHBUG00000008893	setd1a	100	79.955	ENSORLG00000002213	setd1a	100	80.507	Oryzias_latipes
ENSHBUG00000008893	setd1a	100	79.873	ENSORLG00020011897	setd1a	100	80.561	Oryzias_latipes_hni
ENSHBUG00000008893	setd1a	100	79.285	ENSORLG00015004826	setd1a	100	80.606	Oryzias_latipes_hsok
ENSHBUG00000008893	setd1a	100	79.801	ENSOMEG00000019732	setd1a	100	80.507	Oryzias_melastigma
ENSHBUG00000008893	setd1a	52	67.905	ENSOGAG00000028006	-	54	67.905	Otolemur_garnettii
ENSHBUG00000008893	setd1a	100	78.581	ENSPFOG00000013669	setd1a	100	78.255	Poecilia_formosa
ENSHBUG00000008893	setd1a	100	80.371	ENSPLAG00000009294	setd1a	100	79.412	Poecilia_latipinna
ENSHBUG00000008893	setd1a	100	80.479	ENSPMEG00000005864	setd1a	100	79.521	Poecilia_mexicana
ENSHBUG00000008893	setd1a	100	79.729	ENSPREG00000010201	setd1a	100	78.997	Poecilia_reticulata
ENSHBUG00000008893	setd1a	100	99.136	ENSPNYG00000014139	setd1a	100	99.136	Pundamilia_nyererei
ENSHBUG00000008893	setd1a	55	80.205	ENSRBIG00000033047	-	59	79.392	Rhinopithecus_bieti
ENSHBUG00000008893	setd1a	53	80.205	ENSRROG00000040062	-	70	80.205	Rhinopithecus_roxellana
ENSHBUG00000008893	setd1a	100	83.822	ENSSMAG00000008846	setd1a	100	85.180	Scophthalmus_maximus
ENSHBUG00000008893	setd1a	100	89.094	ENSSDUG00000022142	setd1a	100	88.779	Seriola_dumerili
ENSHBUG00000008893	setd1a	100	88.959	ENSSLDG00000018250	setd1a	100	88.644	Seriola_lalandi_dorsalis
ENSHBUG00000008893	setd1a	100	90.032	ENSSPAG00000007822	setd1a	100	89.535	Stegastes_partitus
ENSHBUG00000008893	setd1a	83	80.500	ENSTRUG00000008953	setd1a	99	82.724	Takifugu_rubripes
ENSHBUG00000008893	setd1a	50	89.894	ENSTNIG00000014930	setd1a	90	83.077	Tetraodon_nigroviridis
ENSHBUG00000008893	setd1a	95	80.516	ENSXCOG00000017585	setd1a	100	74.944	Xiphophorus_couchianus
ENSHBUG00000008893	setd1a	100	80.823	ENSXMAG00000008021	setd1a	100	80.100	Xiphophorus_maculatus