EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000009020 (Gene tree)
Gene ID: 102311296
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 5808 bases
Position: chrJH425454.1:1487886-1493693
Accession: 102311296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000007528	RRM_5	PF13893.6	6.1e-12	1	2
ENSHBUP00000007528	RRM_5	PF13893.6	6.1e-12	2	2
ENSHBUP00000026386	RRM_5	PF13893.6	6.1e-12	1	2
ENSHBUP00000026386	RRM_5	PF13893.6	6.1e-12	2	2
ENSHBUP00000007528	RRM_1	PF00076.22	6.9e-29	1	2
ENSHBUP00000007528	RRM_1	PF00076.22	6.9e-29	2	2
ENSHBUP00000026386	RRM_1	PF00076.22	6.9e-29	1	2
ENSHBUP00000026386	RRM_1	PF00076.22	6.9e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000003487	-	5372	XM_005931621	ENSHBUP00000007528	338 (aa)	XP_005931683	UPI00022B0AB5
ENSHBUT00000003478	-	5698	-	ENSHBUP00000026386	338 (aa)	-	UPI00022B0AB5

Gene Model

Click here to download ENSHBUG00000009020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000009020's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000009020	-	99	67.806	ENSHBUG00000009051	rbm4.3	99	67.236
ENSHBUG00000009020	-	94	50.829	ENSHBUG00000011610	rbm4.1	66	56.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000009020	-	100	89.080	ENSAPOG00000002953	rbm4.3	100	89.080	Acanthochromis_polyacanthus
ENSHBUG00000009020	-	97	68.437	ENSAPOG00000002991	rbm4.3	96	65.976	Acanthochromis_polyacanthus
ENSHBUG00000009020	-	97	67.953	ENSACIG00000021295	rbm4.3	96	66.469	Amphilophus_citrinellus
ENSHBUG00000009020	-	100	98.521	ENSACIG00000021311	-	100	98.521	Amphilophus_citrinellus
ENSHBUG00000009020	-	97	68.343	ENSAOCG00000007992	rbm4.3	99	66.667	Amphiprion_ocellaris
ENSHBUG00000009020	-	100	87.896	ENSAOCG00000008015	rbm4.3	100	87.608	Amphiprion_ocellaris
ENSHBUG00000009020	-	97	68.343	ENSAPEG00000017288	rbm4.3	99	66.667	Amphiprion_percula
ENSHBUG00000009020	-	100	88.761	ENSAPEG00000017324	rbm4.3	100	87.032	Amphiprion_percula
ENSHBUG00000009020	-	97	70.270	ENSATEG00000019395	rbm4.3	96	68.168	Anabas_testudineus
ENSHBUG00000009020	-	100	89.049	ENSATEG00000019375	rbm4.3	100	88.761	Anabas_testudineus
ENSHBUG00000009020	-	99	67.521	ENSACLG00000010642	rbm4.3	99	66.952	Astatotilapia_calliptera
ENSHBUG00000009020	-	100	100.000	ENSACLG00000010620	-	100	100.000	Astatotilapia_calliptera
ENSHBUG00000009020	-	62	75.829	ENSAMXG00000040224	rbm4.3	82	73.529	Astyanax_mexicanus
ENSHBUG00000009020	-	100	81.143	ENSCSEG00000013659	rbm4.3	100	79.714	Cynoglossus_semilaevis
ENSHBUG00000009020	-	99	63.324	ENSCVAG00000008502	rbm4.3	99	63.897	Cyprinodon_variegatus
ENSHBUG00000009020	-	100	76.023	ENSCVAG00000008508	rbm4.3	100	79.532	Cyprinodon_variegatus
ENSHBUG00000009020	-	95	71.893	ENSDARG00000022129	rbm4.3	97	67.742	Danio_rerio
ENSHBUG00000009020	-	100	67.614	ENSELUG00000022168	rbm4.3	100	68.661	Esox_lucius
ENSHBUG00000009020	-	99	73.926	ENSELUG00000022155	rbm4.3	99	72.206	Esox_lucius
ENSHBUG00000009020	-	99	71.714	ENSELUG00000022150	rbm4.3	99	68.768	Esox_lucius
ENSHBUG00000009020	-	83	81.004	ENSFHEG00000023137	rbm4.3	84	81.852	Fundulus_heteroclitus
ENSHBUG00000009020	-	100	61.648	ENSGAFG00000001935	rbm4.3	100	60.227	Gambusia_affinis
ENSHBUG00000009020	-	94	78.082	ENSGACG00000019980	rbm4.3	95	63.050	Gasterosteus_aculeatus
ENSHBUG00000009020	-	95	72.372	ENSHCOG00000010349	rbm4.3	100	72.159	Hippocampus_comes
ENSHBUG00000009020	-	100	67.045	ENSIPUG00000022943	RBM4B	100	67.330	Ictalurus_punctatus
ENSHBUG00000009020	-	100	78.592	ENSKMAG00000017468	rbm4.3	100	75.367	Kryptolebias_marmoratus
ENSHBUG00000009020	-	97	60.534	ENSKMAG00000014541	rbm4.3	95	61.176	Kryptolebias_marmoratus
ENSHBUG00000009020	-	100	84.483	ENSLBEG00000001071	-	100	84.483	Labrus_bergylta
ENSHBUG00000009020	-	55	74.332	ENSLBEG00000001025	rbm4.3	68	76.667	Labrus_bergylta
ENSHBUG00000009020	-	95	59.834	ENSLOCG00000002755	rbm4.3	100	61.376	Lepisosteus_oculatus
ENSHBUG00000009020	-	97	67.359	ENSMAMG00000004701	rbm4.3	96	65.579	Mastacembelus_armatus
ENSHBUG00000009020	-	100	88.184	ENSMAMG00000004715	-	84	87.896	Mastacembelus_armatus
ENSHBUG00000009020	-	100	95.858	ENSMZEG00005007417	-	100	95.858	Maylandia_zebra
ENSHBUG00000009020	-	89	91.060	ENSMZEG00005028537	-	85	91.060	Maylandia_zebra
ENSHBUG00000009020	-	88	71.141	ENSMZEG00005007441	rbm4.3	78	68.707	Maylandia_zebra
ENSHBUG00000009020	-	99	67.521	ENSMZEG00005028540	rbm4.3	99	66.952	Maylandia_zebra
ENSHBUG00000009020	-	97	64.897	ENSMMOG00000012191	rbm4.3	96	64.602	Mola_mola
ENSHBUG00000009020	-	87	90.169	ENSMALG00000003001	rbm4.3	86	89.761	Monopterus_albus
ENSHBUG00000009020	-	93	69.649	ENSMALG00000015014	-	89	65.815	Monopterus_albus
ENSHBUG00000009020	-	98	66.465	ENSMALG00000003032	rbm4.3	93	65.696	Monopterus_albus
ENSHBUG00000009020	-	97	67.160	ENSNBRG00000012372	rbm4.3	96	65.089	Neolamprologus_brichardi
ENSHBUG00000009020	-	100	100.000	ENSONIG00000018380	-	100	100.000	Oreochromis_niloticus
ENSHBUG00000009020	-	97	67.155	ENSONIG00000018378	rbm4.3	96	65.396	Oreochromis_niloticus
ENSHBUG00000009020	-	96	57.567	ENSORLG00000024749	rbm4.3	95	52.679	Oryzias_latipes
ENSHBUG00000009020	-	100	77.429	ENSORLG00000012473	rbm4.3	100	75.714	Oryzias_latipes
ENSHBUG00000009020	-	100	80.000	ENSORLG00000011589	rbm4.3	100	77.714	Oryzias_latipes
ENSHBUG00000009020	-	100	79.714	ENSORLG00020012474	rbm4.3	100	77.714	Oryzias_latipes_hni
ENSHBUG00000009020	-	99	58.621	ENSORLG00020012482	rbm4.3	99	53.890	Oryzias_latipes_hni
ENSHBUG00000009020	-	100	77.429	ENSORLG00020012464	rbm4.3	100	75.714	Oryzias_latipes_hni
ENSHBUG00000009020	-	100	77.429	ENSORLG00015013686	rbm4.3	100	75.714	Oryzias_latipes_hsok
ENSHBUG00000009020	-	97	58.065	ENSORLG00015013721	rbm4.3	99	53.448	Oryzias_latipes_hsok
ENSHBUG00000009020	-	100	78.286	ENSORLG00015013698	rbm4.3	100	78.000	Oryzias_latipes_hsok
ENSHBUG00000009020	-	100	72.394	ENSOMEG00000005918	rbm4.3	100	72.394	Oryzias_melastigma
ENSHBUG00000009020	-	97	76.991	ENSOMEG00000005929	rbm4.3	100	76.353	Oryzias_melastigma
ENSHBUG00000009020	-	96	59.706	ENSOMEG00000005950	rbm4.3	99	59.026	Oryzias_melastigma
ENSHBUG00000009020	-	93	71.293	ENSPKIG00000007001	rbm4.3	100	67.429	Paramormyrops_kingsleyae
ENSHBUG00000009020	-	99	63.068	ENSPLAG00000006077	rbm4.3	99	61.648	Poecilia_latipinna
ENSHBUG00000009020	-	100	74.929	ENSPLAG00000006131	rbm4.3	100	74.929	Poecilia_latipinna
ENSHBUG00000009020	-	99	63.248	ENSPMEG00000024260	rbm4.3	99	61.538	Poecilia_mexicana
ENSHBUG00000009020	-	100	78.363	ENSPMEG00000024263	rbm4.3	100	81.287	Poecilia_mexicana
ENSHBUG00000009020	-	100	74.644	ENSPMEG00000024271	rbm4.3	100	74.644	Poecilia_mexicana
ENSHBUG00000009020	-	100	71.264	ENSPREG00000002156	rbm4.3	100	72.126	Poecilia_reticulata
ENSHBUG00000009020	-	99	62.817	ENSPREG00000002093	-	99	62.393	Poecilia_reticulata
ENSHBUG00000009020	-	100	100.000	ENSPNYG00000018541	rbm4.3	100	100.000	Pundamilia_nyererei
ENSHBUG00000009020	-	99	67.236	ENSPNYG00000018564	rbm4.3	99	66.952	Pundamilia_nyererei
ENSHBUG00000009020	-	100	67.403	ENSPNAG00000013053	rbm4.3	100	66.852	Pygocentrus_nattereri
ENSHBUG00000009020	-	100	64.641	ENSSFOG00015015563	rbm4.3	100	64.365	Scleropages_formosus
ENSHBUG00000009020	-	97	65.179	ENSSMAG00000013653	rbm4.3	96	60.417	Scophthalmus_maximus
ENSHBUG00000009020	-	100	85.303	ENSSMAG00000013644	rbm4.3	100	83.573	Scophthalmus_maximus
ENSHBUG00000009020	-	100	88.184	ENSSDUG00000018435	rbm4.3	100	87.896	Seriola_dumerili
ENSHBUG00000009020	-	97	67.552	ENSSDUG00000018422	rbm4.3	99	63.610	Seriola_dumerili
ENSHBUG00000009020	-	97	66.864	ENSSLDG00000017182	rbm4.3	96	62.426	Seriola_lalandi_dorsalis
ENSHBUG00000009020	-	100	88.184	ENSSLDG00000017204	rbm4.3	100	87.896	Seriola_lalandi_dorsalis
ENSHBUG00000009020	-	100	87.320	ENSSPAG00000008062	rbm4.3	100	87.032	Stegastes_partitus
ENSHBUG00000009020	-	96	65.774	ENSSPAG00000008041	rbm4.3	81	63.095	Stegastes_partitus
ENSHBUG00000009020	-	100	84.241	ENSTRUG00000020901	rbm4.3	100	82.808	Takifugu_rubripes
ENSHBUG00000009020	-	97	62.426	ENSTRUG00000023874	rbm4.3	96	64.897	Takifugu_rubripes
ENSHBUG00000009020	-	100	83.285	ENSTNIG00000005668	rbm4.3	100	82.997	Tetraodon_nigroviridis
ENSHBUG00000009020	-	97	62.757	ENSXCOG00000005996	rbm4.3	97	62.647	Xiphophorus_couchianus
ENSHBUG00000009020	-	100	79.532	ENSXCOG00000006001	rbm4.3	100	80.117	Xiphophorus_couchianus
ENSHBUG00000009020	-	97	62.391	ENSXMAG00000025173	rbm4.3	99	62.108	Xiphophorus_maculatus
ENSHBUG00000009020	-	100	79.532	ENSXMAG00000021997	rbm4.3	100	80.117	Xiphophorus_maculatus
ENSHBUG00000009020	-	100	74.929	ENSXMAG00000011698	rbm4.3	100	75.783	Xiphophorus_maculatus