EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000009051 (Gene tree)
Gene ID: 102310569
Gene Symbol: rbm4.3
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 6638 bases
Position: chrJH425454.1:1475156-1481793
Accession: 102310569
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000007556	RRM_5	PF13893.6	2.7e-11	1	2
ENSHBUP00000007556	RRM_5	PF13893.6	2.7e-11	2	2
ENSHBUP00000007569	RRM_5	PF13893.6	2.7e-11	1	2
ENSHBUP00000007569	RRM_5	PF13893.6	2.7e-11	2	2
ENSHBUP00000007556	RRM_1	PF00076.22	3.4e-26	1	2
ENSHBUP00000007556	RRM_1	PF00076.22	3.4e-26	2	2
ENSHBUP00000007569	RRM_1	PF00076.22	3.4e-26	1	2
ENSHBUP00000007569	RRM_1	PF00076.22	3.4e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000003431	-	4166	-	ENSHBUP00000007569	344 (aa)	-	UPI0003BC9CBD
ENSHBUT00000003447	-	3875	XM_005931619	ENSHBUP00000007556	344 (aa)	XP_005931681	UPI0003BC9CBD

Gene Model

Click here to download ENSHBUG00000009051's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000009051's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000009051	rbm4.3	99	67.236	ENSHBUG00000009020	-	99	67.806
ENSHBUG00000009051	rbm4.3	86	54.248	ENSHBUG00000011610	rbm4.1	66	54.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000009051	rbm4.3	100	84.058	ENSAPOG00000002991	rbm4.3	100	84.348	Acanthochromis_polyacanthus
ENSHBUG00000009051	rbm4.3	99	70.940	ENSAPOG00000002953	rbm4.3	99	71.510	Acanthochromis_polyacanthus
ENSHBUG00000009051	rbm4.3	99	66.382	ENSACIG00000021311	-	99	67.236	Amphilophus_citrinellus
ENSHBUG00000009051	rbm4.3	100	91.014	ENSACIG00000021295	rbm4.3	100	91.014	Amphilophus_citrinellus
ENSHBUG00000009051	rbm4.3	100	84.638	ENSAOCG00000007992	rbm4.3	96	85.152	Amphiprion_ocellaris
ENSHBUG00000009051	rbm4.3	99	71.143	ENSAOCG00000008015	rbm4.3	99	71.429	Amphiprion_ocellaris
ENSHBUG00000009051	rbm4.3	99	71.347	ENSAPEG00000017324	rbm4.3	99	71.347	Amphiprion_percula
ENSHBUG00000009051	rbm4.3	100	84.638	ENSAPEG00000017288	rbm4.3	96	85.152	Amphiprion_percula
ENSHBUG00000009051	rbm4.3	99	70.286	ENSATEG00000019375	rbm4.3	99	70.571	Anabas_testudineus
ENSHBUG00000009051	rbm4.3	100	81.268	ENSATEG00000019395	rbm4.3	100	81.844	Anabas_testudineus
ENSHBUG00000009051	rbm4.3	100	99.128	ENSACLG00000010642	rbm4.3	100	99.128	Astatotilapia_calliptera
ENSHBUG00000009051	rbm4.3	99	67.236	ENSACLG00000010620	-	99	67.806	Astatotilapia_calliptera
ENSHBUG00000009051	rbm4.3	52	74.302	ENSAMXG00000040224	rbm4.3	73	73.184	Astyanax_mexicanus
ENSHBUG00000009051	rbm4.3	99	63.456	ENSCSEG00000013659	rbm4.3	97	66.372	Cynoglossus_semilaevis
ENSHBUG00000009051	rbm4.3	96	64.706	ENSCVAG00000008508	rbm4.3	97	65.192	Cyprinodon_variegatus
ENSHBUG00000009051	rbm4.3	100	77.650	ENSCVAG00000008502	rbm4.3	100	78.797	Cyprinodon_variegatus
ENSHBUG00000009051	rbm4.3	94	71.429	ENSDARG00000022129	rbm4.3	97	71.131	Danio_rerio
ENSHBUG00000009051	rbm4.3	97	68.103	ENSELUG00000022150	rbm4.3	97	66.962	Esox_lucius
ENSHBUG00000009051	rbm4.3	97	70.175	ENSELUG00000022168	rbm4.3	97	71.810	Esox_lucius
ENSHBUG00000009051	rbm4.3	97	67.429	ENSELUG00000022155	rbm4.3	97	69.412	Esox_lucius
ENSHBUG00000009051	rbm4.3	100	75.843	ENSFHEG00000023096	rbm4.3	100	76.685	Fundulus_heteroclitus
ENSHBUG00000009051	rbm4.3	79	69.424	ENSFHEG00000023137	rbm4.3	87	69.784	Fundulus_heteroclitus
ENSHBUG00000009051	rbm4.3	63	75.000	ENSGMOG00000004032	rbm4.3	52	76.636	Gadus_morhua
ENSHBUG00000009051	rbm4.3	99	76.504	ENSGAFG00000001935	rbm4.3	99	75.072	Gambusia_affinis
ENSHBUG00000009051	rbm4.3	99	80.275	ENSGACG00000019980	rbm4.3	100	77.429	Gasterosteus_aculeatus
ENSHBUG00000009051	rbm4.3	100	66.477	ENSHCOG00000010363	rbm4.3	94	71.131	Hippocampus_comes
ENSHBUG00000009051	rbm4.3	94	66.163	ENSHCOG00000010349	rbm4.3	96	65.579	Hippocampus_comes
ENSHBUG00000009051	rbm4.3	96	65.487	ENSIPUG00000022943	RBM4B	97	66.077	Ictalurus_punctatus
ENSHBUG00000009051	rbm4.3	97	61.471	ENSKMAG00000017468	rbm4.3	97	63.422	Kryptolebias_marmoratus
ENSHBUG00000009051	rbm4.3	100	75.783	ENSKMAG00000014541	rbm4.3	100	76.353	Kryptolebias_marmoratus
ENSHBUG00000009051	rbm4.3	99	68.091	ENSLBEG00000001071	-	99	68.946	Labrus_bergylta
ENSHBUG00000009051	rbm4.3	55	83.069	ENSLBEG00000001025	rbm4.3	86	82.540	Labrus_bergylta
ENSHBUG00000009051	rbm4.3	94	55.525	ENSLOCG00000002755	rbm4.3	97	56.403	Lepisosteus_oculatus
ENSHBUG00000009051	rbm4.3	100	82.081	ENSMAMG00000004701	rbm4.3	100	82.659	Mastacembelus_armatus
ENSHBUG00000009051	rbm4.3	99	69.714	ENSMAMG00000004715	-	83	70.286	Mastacembelus_armatus
ENSHBUG00000009051	rbm4.3	100	99.128	ENSMZEG00005028540	rbm4.3	100	99.128	Maylandia_zebra
ENSHBUG00000009051	rbm4.3	99	63.533	ENSMZEG00005007417	-	99	64.103	Maylandia_zebra
ENSHBUG00000009051	rbm4.3	83	62.838	ENSMZEG00005028537	-	83	64.865	Maylandia_zebra
ENSHBUG00000009051	rbm4.3	84	99.308	ENSMZEG00005007441	rbm4.3	79	99.308	Maylandia_zebra
ENSHBUG00000009051	rbm4.3	100	78.797	ENSMMOG00000012191	rbm4.3	100	79.370	Mola_mola
ENSHBUG00000009051	rbm4.3	85	67.881	ENSMALG00000003001	rbm4.3	87	71.186	Monopterus_albus
ENSHBUG00000009051	rbm4.3	100	79.769	ENSMALG00000015014	-	96	80.606	Monopterus_albus
ENSHBUG00000009051	rbm4.3	90	80.323	ENSMALG00000003032	rbm4.3	95	80.968	Monopterus_albus
ENSHBUG00000009051	rbm4.3	100	97.384	ENSNBRG00000012372	rbm4.3	100	97.384	Neolamprologus_brichardi
ENSHBUG00000009051	rbm4.3	99	67.236	ENSONIG00000018380	-	99	67.806	Oreochromis_niloticus
ENSHBUG00000009051	rbm4.3	100	94.828	ENSONIG00000018378	rbm4.3	100	94.828	Oreochromis_niloticus
ENSHBUG00000009051	rbm4.3	96	58.261	ENSORLG00000012473	rbm4.3	97	59.770	Oryzias_latipes
ENSHBUG00000009051	rbm4.3	96	59.012	ENSORLG00000011589	rbm4.3	97	60.290	Oryzias_latipes
ENSHBUG00000009051	rbm4.3	100	70.029	ENSORLG00000024749	rbm4.3	96	69.578	Oryzias_latipes
ENSHBUG00000009051	rbm4.3	100	69.164	ENSORLG00020012482	rbm4.3	97	69.880	Oryzias_latipes_hni
ENSHBUG00000009051	rbm4.3	96	58.261	ENSORLG00020012464	rbm4.3	97	59.770	Oryzias_latipes_hni
ENSHBUG00000009051	rbm4.3	96	58.721	ENSORLG00020012474	rbm4.3	97	60.000	Oryzias_latipes_hni
ENSHBUG00000009051	rbm4.3	100	69.741	ENSORLG00015013721	rbm4.3	96	69.880	Oryzias_latipes_hsok
ENSHBUG00000009051	rbm4.3	96	57.558	ENSORLG00015013698	rbm4.3	97	60.290	Oryzias_latipes_hsok
ENSHBUG00000009051	rbm4.3	96	57.971	ENSORLG00015013686	rbm4.3	97	59.483	Oryzias_latipes_hsok
ENSHBUG00000009051	rbm4.3	100	73.121	ENSOMEG00000005950	rbm4.3	96	74.018	Oryzias_melastigma
ENSHBUG00000009051	rbm4.3	97	57.955	ENSOMEG00000005918	rbm4.3	94	61.747	Oryzias_melastigma
ENSHBUG00000009051	rbm4.3	96	58.551	ENSOMEG00000005929	rbm4.3	97	59.538	Oryzias_melastigma
ENSHBUG00000009051	rbm4.3	92	67.976	ENSPKIG00000007001	rbm4.3	97	67.761	Paramormyrops_kingsleyae
ENSHBUG00000009051	rbm4.3	100	80.453	ENSPLAG00000006077	rbm4.3	100	79.603	Poecilia_latipinna
ENSHBUG00000009051	rbm4.3	97	63.265	ENSPLAG00000006131	rbm4.3	97	64.012	Poecilia_latipinna
ENSHBUG00000009051	rbm4.3	100	80.966	ENSPMEG00000024260	rbm4.3	100	80.398	Poecilia_mexicana
ENSHBUG00000009051	rbm4.3	99	64.489	ENSPMEG00000024263	rbm4.3	99	64.773	Poecilia_mexicana
ENSHBUG00000009051	rbm4.3	97	63.450	ENSPMEG00000024271	rbm4.3	97	64.307	Poecilia_mexicana
ENSHBUG00000009051	rbm4.3	100	79.545	ENSPREG00000002093	-	100	80.114	Poecilia_reticulata
ENSHBUG00000009051	rbm4.3	97	62.130	ENSPREG00000002156	rbm4.3	97	59.130	Poecilia_reticulata
ENSHBUG00000009051	rbm4.3	100	98.551	ENSPNYG00000018564	rbm4.3	100	98.551	Pundamilia_nyererei
ENSHBUG00000009051	rbm4.3	99	67.236	ENSPNYG00000018541	rbm4.3	99	67.806	Pundamilia_nyererei
ENSHBUG00000009051	rbm4.3	97	66.384	ENSPNAG00000013053	rbm4.3	97	67.816	Pygocentrus_nattereri
ENSHBUG00000009051	rbm4.3	97	63.510	ENSSFOG00015015563	rbm4.3	97	63.533	Scleropages_formosus
ENSHBUG00000009051	rbm4.3	100	75.862	ENSSMAG00000013653	rbm4.3	96	77.778	Scophthalmus_maximus
ENSHBUG00000009051	rbm4.3	99	69.341	ENSSMAG00000013644	rbm4.3	99	69.714	Scophthalmus_maximus
ENSHBUG00000009051	rbm4.3	99	69.714	ENSSDUG00000018435	rbm4.3	99	70.000	Seriola_dumerili
ENSHBUG00000009051	rbm4.3	100	81.897	ENSSDUG00000018422	rbm4.3	100	81.897	Seriola_dumerili
ENSHBUG00000009051	rbm4.3	100	80.747	ENSSLDG00000017182	rbm4.3	100	80.747	Seriola_lalandi_dorsalis
ENSHBUG00000009051	rbm4.3	99	69.714	ENSSLDG00000017204	rbm4.3	99	70.000	Seriola_lalandi_dorsalis
ENSHBUG00000009051	rbm4.3	99	69.143	ENSSPAG00000008062	rbm4.3	97	71.726	Stegastes_partitus
ENSHBUG00000009051	rbm4.3	100	83.815	ENSSPAG00000008041	rbm4.3	81	85.366	Stegastes_partitus
ENSHBUG00000009051	rbm4.3	100	77.937	ENSTRUG00000023874	rbm4.3	100	78.797	Takifugu_rubripes
ENSHBUG00000009051	rbm4.3	97	67.733	ENSTRUG00000020901	rbm4.3	97	68.343	Takifugu_rubripes
ENSHBUG00000009051	rbm4.3	97	64.516	ENSTNIG00000005668	rbm4.3	97	65.476	Tetraodon_nigroviridis
ENSHBUG00000009051	rbm4.3	96	80.597	ENSXCOG00000005996	rbm4.3	97	80.896	Xiphophorus_couchianus
ENSHBUG00000009051	rbm4.3	99	63.920	ENSXCOG00000006001	rbm4.3	99	63.920	Xiphophorus_couchianus
ENSHBUG00000009051	rbm4.3	96	80.119	ENSXMAG00000025173	rbm4.3	100	79.545	Xiphophorus_maculatus
ENSHBUG00000009051	rbm4.3	99	63.636	ENSXMAG00000021997	rbm4.3	99	63.636	Xiphophorus_maculatus
ENSHBUG00000009051	rbm4.3	97	63.848	ENSXMAG00000011698	rbm4.3	97	64.897	Xiphophorus_maculatus