EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000009191 (Gene tree)
Gene ID: 102300550
Gene Symbol: ptcd2
Alias: zgc:112401
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 2443 bases
Position: chrJH425339.1:1615634-1618076
Accession: 102300550
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000007706	MRP-S27	PF10037.9	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000003186	-	1174	XM_005917226	ENSHBUP00000007706	388 (aa)	XP_005917288	UPI0006C96116

Gene Model

Click here to download ENSHBUG00000009191's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000009191's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000009191	ptcd2	95	42.480	ENSG00000049883	PTCD2	98	42.480	Homo_sapiens
ENSHBUG00000009191	ptcd2	98	78.740	ENSAPOG00000020682	ptcd2	100	78.740	Acanthochromis_polyacanthus
ENSHBUG00000009191	ptcd2	89	45.845	ENSAMEG00000007194	PTCD2	90	45.845	Ailuropoda_melanoleuca
ENSHBUG00000009191	ptcd2	89	80.747	ENSACIG00000002053	ptcd2	100	80.747	Amphilophus_citrinellus
ENSHBUG00000009191	ptcd2	100	80.412	ENSAOCG00000006616	ptcd2	100	80.412	Amphiprion_ocellaris
ENSHBUG00000009191	ptcd2	100	80.155	ENSAPEG00000022926	ptcd2	100	80.155	Amphiprion_percula
ENSHBUG00000009191	ptcd2	100	46.056	ENSACAG00000009747	PTCD2	100	46.056	Anolis_carolinensis
ENSHBUG00000009191	ptcd2	94	42.706	ENSANAG00000029353	PTCD2	97	42.706	Aotus_nancymaae
ENSHBUG00000009191	ptcd2	100	98.969	ENSACLG00000027742	ptcd2	100	98.969	Astatotilapia_calliptera
ENSHBUG00000009191	ptcd2	98	49.871	ENSAMXG00000029404	ptcd2	100	49.871	Astyanax_mexicanus
ENSHBUG00000009191	ptcd2	91	44.598	ENSBTAG00000014675	PTCD2	94	44.598	Bos_taurus
ENSHBUG00000009191	ptcd2	94	41.645	ENSCJAG00000016364	PTCD2	97	41.645	Callithrix_jacchus
ENSHBUG00000009191	ptcd2	99	46.667	ENSCAFG00000007982	PTCD2	91	46.667	Canis_familiaris
ENSHBUG00000009191	ptcd2	89	48.703	ENSCAFG00020019147	PTCD2	97	48.703	Canis_lupus_dingo
ENSHBUG00000009191	ptcd2	91	44.321	ENSCHIG00000017118	PTCD2	94	44.321	Capra_hircus
ENSHBUG00000009191	ptcd2	91	43.490	ENSCPOG00000040168	PTCD2	94	43.490	Cavia_porcellus
ENSHBUG00000009191	ptcd2	75	42.384	ENSCCAG00000021996	-	93	42.384	Cebus_capucinus
ENSHBUG00000009191	ptcd2	94	42.706	ENSCCAG00000029389	-	97	42.706	Cebus_capucinus
ENSHBUG00000009191	ptcd2	96	44.385	ENSCATG00000019069	PTCD2	98	44.385	Cercocebus_atys
ENSHBUG00000009191	ptcd2	91	43.490	ENSCLAG00000000072	PTCD2	94	43.490	Chinchilla_lanigera
ENSHBUG00000009191	ptcd2	89	45.115	ENSCSAG00000015623	PTCD2	98	44.267	Chlorocebus_sabaeus
ENSHBUG00000009191	ptcd2	71	50.000	ENSCHOG00000010634	PTCD2	79	50.000	Choloepus_hoffmanni
ENSHBUG00000009191	ptcd2	89	46.110	ENSCPBG00000000216	PTCD2	89	46.110	Chrysemys_picta_bellii
ENSHBUG00000009191	ptcd2	96	44.533	ENSCANG00000035636	PTCD2	96	44.533	Colobus_angolensis_palliatus
ENSHBUG00000009191	ptcd2	95	46.237	ENSCGRG00001015289	Ptcd2	81	46.237	Cricetulus_griseus_chok1gshd
ENSHBUG00000009191	ptcd2	95	46.237	ENSCGRG00000006193	Ptcd2	81	46.237	Cricetulus_griseus_crigri
ENSHBUG00000009191	ptcd2	100	75.510	ENSCVAG00000001285	ptcd2	100	75.510	Cyprinodon_variegatus
ENSHBUG00000009191	ptcd2	98	51.697	ENSDARG00000035391	ptcd2	100	51.697	Danio_rerio
ENSHBUG00000009191	ptcd2	89	44.957	ENSDNOG00000008719	PTCD2	91	44.957	Dasypus_novemcinctus
ENSHBUG00000009191	ptcd2	96	44.180	ENSDORG00000004921	Ptcd2	98	44.180	Dipodomys_ordii
ENSHBUG00000009191	ptcd2	96	42.359	ENSETEG00000016542	PTCD2	95	42.359	Echinops_telfairi
ENSHBUG00000009191	ptcd2	90	45.584	ENSEASG00005018038	PTCD2	92	45.584	Equus_asinus_asinus
ENSHBUG00000009191	ptcd2	90	45.584	ENSECAG00000007022	PTCD2	90	45.584	Equus_caballus
ENSHBUG00000009191	ptcd2	93	45.082	ENSEEUG00000014031	PTCD2	94	45.082	Erinaceus_europaeus
ENSHBUG00000009191	ptcd2	98	62.141	ENSELUG00000003584	ptcd2	100	62.141	Esox_lucius
ENSHBUG00000009191	ptcd2	81	47.785	ENSFCAG00000045432	PTCD2	74	47.785	Felis_catus
ENSHBUG00000009191	ptcd2	84	44.648	ENSFALG00000010299	PTCD2	99	44.648	Ficedula_albicollis
ENSHBUG00000009191	ptcd2	92	42.350	ENSFDAG00000018461	PTCD2	96	42.350	Fukomys_damarensis
ENSHBUG00000009191	ptcd2	98	62.663	ENSGMOG00000003637	ptcd2	99	62.663	Gadus_morhua
ENSHBUG00000009191	ptcd2	91	44.633	ENSGALG00000038260	PTCD2	92	44.633	Gallus_gallus
ENSHBUG00000009191	ptcd2	89	49.280	ENSGAGG00000021952	PTCD2	89	49.280	Gopherus_agassizii
ENSHBUG00000009191	ptcd2	95	42.480	ENSGGOG00000010695	PTCD2	98	42.480	Gorilla_gorilla
ENSHBUG00000009191	ptcd2	89	45.115	ENSHGLG00000001234	PTCD2	91	45.115	Heterocephalus_glaber_female
ENSHBUG00000009191	ptcd2	89	45.115	ENSHGLG00100015419	PTCD2	91	45.115	Heterocephalus_glaber_male
ENSHBUG00000009191	ptcd2	98	67.792	ENSHCOG00000001703	ptcd2	100	67.792	Hippocampus_comes
ENSHBUG00000009191	ptcd2	92	55.833	ENSIPUG00000006080	ptcd2	99	55.091	Ictalurus_punctatus
ENSHBUG00000009191	ptcd2	95	42.667	ENSSTOG00000006596	PTCD2	97	42.667	Ictidomys_tridecemlineatus
ENSHBUG00000009191	ptcd2	89	46.991	ENSJJAG00000024388	Ptcd2	91	46.991	Jaculus_jaculus
ENSHBUG00000009191	ptcd2	97	62.933	ENSKMAG00000009329	ptcd2	98	62.933	Kryptolebias_marmoratus
ENSHBUG00000009191	ptcd2	100	72.165	ENSLBEG00000024871	ptcd2	99	72.165	Labrus_bergylta
ENSHBUG00000009191	ptcd2	98	53.906	ENSLOCG00000011122	ptcd2	100	53.906	Lepisosteus_oculatus
ENSHBUG00000009191	ptcd2	71	49.818	ENSLAFG00000004115	PTCD2	88	49.818	Loxodonta_africana
ENSHBUG00000009191	ptcd2	99	44.072	ENSMFAG00000031516	PTCD2	99	44.072	Macaca_fascicularis
ENSHBUG00000009191	ptcd2	96	44.267	ENSMNEG00000007537	PTCD2	98	44.267	Macaca_nemestrina
ENSHBUG00000009191	ptcd2	99	43.557	ENSMLEG00000031093	PTCD2	99	43.557	Mandrillus_leucophaeus
ENSHBUG00000009191	ptcd2	98	77.690	ENSMAMG00000018529	ptcd2	100	77.690	Mastacembelus_armatus
ENSHBUG00000009191	ptcd2	100	98.969	ENSMZEG00005003625	ptcd2	100	98.969	Maylandia_zebra
ENSHBUG00000009191	ptcd2	89	44.540	ENSMGAG00000005033	PTCD2	100	44.540	Meleagris_gallopavo
ENSHBUG00000009191	ptcd2	89	41.961	ENSMAUG00000020253	Ptcd2	90	38.177	Mesocricetus_auratus
ENSHBUG00000009191	ptcd2	95	43.272	ENSMICG00000004535	PTCD2	98	43.272	Microcebus_murinus
ENSHBUG00000009191	ptcd2	95	44.744	ENSMOCG00000019985	Ptcd2	97	44.744	Microtus_ochrogaster
ENSHBUG00000009191	ptcd2	98	43.377	ENSMODG00000001695	PTCD2	100	43.377	Monodelphis_domestica
ENSHBUG00000009191	ptcd2	98	77.690	ENSMALG00000022372	ptcd2	100	77.690	Monopterus_albus
ENSHBUG00000009191	ptcd2	89	45.115	MGP_CAROLIEiJ_G0018829	Ptcd2	91	45.115	Mus_caroli
ENSHBUG00000009191	ptcd2	89	44.828	ENSMUSG00000021650	Ptcd2	91	44.828	Mus_musculus
ENSHBUG00000009191	ptcd2	89	45.690	MGP_PahariEiJ_G0015904	Ptcd2	91	45.690	Mus_pahari
ENSHBUG00000009191	ptcd2	89	45.690	MGP_SPRETEiJ_G0019711	Ptcd2	91	45.690	Mus_spretus
ENSHBUG00000009191	ptcd2	89	46.705	ENSMPUG00000014401	PTCD2	91	46.705	Mustela_putorius_furo
ENSHBUG00000009191	ptcd2	89	44.540	ENSMLUG00000007374	PTCD2	91	44.476	Myotis_lucifugus
ENSHBUG00000009191	ptcd2	89	43.678	ENSNGAG00000005027	Ptcd2	91	43.678	Nannospalax_galili
ENSHBUG00000009191	ptcd2	85	93.009	ENSNBRG00000000092	-	100	93.009	Neolamprologus_brichardi
ENSHBUG00000009191	ptcd2	98	97.900	ENSNBRG00000008174	ptcd2	100	97.900	Neolamprologus_brichardi
ENSHBUG00000009191	ptcd2	89	44.092	ENSNLEG00000004516	PTCD2	89	44.092	Nomascus_leucogenys
ENSHBUG00000009191	ptcd2	59	54.601	ENSMEUG00000014012	-	63	51.705	Notamacropus_eugenii
ENSHBUG00000009191	ptcd2	89	45.977	ENSOPRG00000007290	PTCD2	90	45.977	Ochotona_princeps
ENSHBUG00000009191	ptcd2	92	44.687	ENSODEG00000016417	PTCD2	96	44.687	Octodon_degus
ENSHBUG00000009191	ptcd2	86	97.006	ENSONIG00000011269	ptcd2	98	97.006	Oreochromis_niloticus
ENSHBUG00000009191	ptcd2	89	45.402	ENSOCUG00000007970	PTCD2	91	45.402	Oryctolagus_cuniculus
ENSHBUG00000009191	ptcd2	100	72.821	ENSORLG00000003851	ptcd2	100	72.821	Oryzias_latipes
ENSHBUG00000009191	ptcd2	99	71.354	ENSORLG00020009823	ptcd2	99	71.354	Oryzias_latipes_hni
ENSHBUG00000009191	ptcd2	89	72.464	ENSORLG00015016777	ptcd2	99	72.464	Oryzias_latipes_hsok
ENSHBUG00000009191	ptcd2	100	72.564	ENSOMEG00000012396	ptcd2	95	72.564	Oryzias_melastigma
ENSHBUG00000009191	ptcd2	89	46.264	ENSOGAG00000008390	PTCD2	90	46.264	Otolemur_garnettii
ENSHBUG00000009191	ptcd2	91	44.598	ENSOARG00000005087	PTCD2	93	44.598	Ovis_aries
ENSHBUG00000009191	ptcd2	95	42.480	ENSPPAG00000028480	PTCD2	98	42.480	Pan_paniscus
ENSHBUG00000009191	ptcd2	95	42.216	ENSPTRG00000016968	PTCD2	98	42.216	Pan_troglodytes
ENSHBUG00000009191	ptcd2	89	45.507	ENSPANG00000006611	PTCD2	89	45.507	Papio_anubis
ENSHBUG00000009191	ptcd2	98	54.663	ENSPKIG00000019896	ptcd2	100	54.663	Paramormyrops_kingsleyae
ENSHBUG00000009191	ptcd2	78	48.355	ENSPSIG00000014559	PTCD2	94	48.355	Pelodiscus_sinensis
ENSHBUG00000009191	ptcd2	95	46.649	ENSPEMG00000000884	Ptcd2	97	46.649	Peromyscus_maniculatus_bairdii
ENSHBUG00000009191	ptcd2	91	45.682	ENSPCIG00000029047	PTCD2	93	45.682	Phascolarctos_cinereus
ENSHBUG00000009191	ptcd2	97	75.733	ENSPLAG00000010456	ptcd2	98	75.733	Poecilia_latipinna
ENSHBUG00000009191	ptcd2	99	73.711	ENSPREG00000021797	ptcd2	99	73.711	Poecilia_reticulata
ENSHBUG00000009191	ptcd2	89	39.080	ENSPPYG00000015543	PTCD2	88	39.080	Pongo_abelii
ENSHBUG00000009191	ptcd2	71	41.606	ENSPCAG00000006806	PTCD2	87	41.606	Procavia_capensis
ENSHBUG00000009191	ptcd2	89	45.115	ENSPVAG00000010935	PTCD2	90	45.115	Pteropus_vampyrus
ENSHBUG00000009191	ptcd2	100	98.454	ENSPNYG00000003122	ptcd2	100	98.454	Pundamilia_nyererei
ENSHBUG00000009191	ptcd2	98	62.760	ENSPNAG00000021490	ptcd2	100	62.760	Pygocentrus_nattereri
ENSHBUG00000009191	ptcd2	89	47.414	ENSRNOG00000028403	Ptcd2	91	47.414	Rattus_norvegicus
ENSHBUG00000009191	ptcd2	96	40.533	ENSRBIG00000032929	PTCD2	96	40.533	Rhinopithecus_bieti
ENSHBUG00000009191	ptcd2	96	44.267	ENSRROG00000000080	PTCD2	98	44.267	Rhinopithecus_roxellana
ENSHBUG00000009191	ptcd2	94	41.910	ENSSBOG00000018911	PTCD2	98	41.910	Saimiri_boliviensis_boliviensis
ENSHBUG00000009191	ptcd2	96	44.032	ENSSHAG00000003833	PTCD2	97	44.032	Sarcophilus_harrisii
ENSHBUG00000009191	ptcd2	98	53.906	ENSSFOG00015015415	ptcd2	100	53.906	Scleropages_formosus
ENSHBUG00000009191	ptcd2	98	66.753	ENSSMAG00000010350	ptcd2	100	66.753	Scophthalmus_maximus
ENSHBUG00000009191	ptcd2	100	78.351	ENSSDUG00000008142	ptcd2	97	78.351	Seriola_dumerili
ENSHBUG00000009191	ptcd2	98	78.478	ENSSLDG00000015284	ptcd2	100	78.478	Seriola_lalandi_dorsalis
ENSHBUG00000009191	ptcd2	71	40.876	ENSSARG00000004983	PTCD2	87	40.876	Sorex_araneus
ENSHBUG00000009191	ptcd2	89	45.690	ENSSPUG00000000176	PTCD2	87	45.690	Sphenodon_punctatus
ENSHBUG00000009191	ptcd2	100	71.134	ENSSPAG00000008591	ptcd2	100	71.134	Stegastes_partitus
ENSHBUG00000009191	ptcd2	93	44.809	ENSSSCG00000016975	PTCD2	86	44.809	Sus_scrofa
ENSHBUG00000009191	ptcd2	89	45.507	ENSTGUG00000005705	PTCD2	99	45.507	Taeniopygia_guttata
ENSHBUG00000009191	ptcd2	95	42.298	ENSTBEG00000016559	PTCD2	98	42.298	Tupaia_belangeri
ENSHBUG00000009191	ptcd2	89	45.977	ENSTTRG00000011851	PTCD2	89	45.977	Tursiops_truncatus
ENSHBUG00000009191	ptcd2	99	43.990	ENSUAMG00000007583	PTCD2	91	43.990	Ursus_americanus
ENSHBUG00000009191	ptcd2	93	45.082	ENSUMAG00000007666	PTCD2	95	45.082	Ursus_maritimus
ENSHBUG00000009191	ptcd2	89	44.540	ENSVPAG00000009597	PTCD2	89	44.540	Vicugna_pacos
ENSHBUG00000009191	ptcd2	89	48.138	ENSVVUG00000007299	-	92	48.023	Vulpes_vulpes
ENSHBUG00000009191	ptcd2	89	44.857	ENSXETG00000031652	PTCD2	91	44.857	Xenopus_tropicalis
ENSHBUG00000009191	ptcd2	99	74.550	ENSXMAG00000005940	ptcd2	92	74.550	Xiphophorus_maculatus