EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000009218 (Gene tree)
Gene ID: -
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 6534 bases
Position: chrJH425359.1:1914801-1921334
Accession: 102303000
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000007668	RRM_5	PF13893.6	5.3e-06	1	1
ENSHBUP00000007668	RRM_1	PF00076.22	6.8e-14	1	1
ENSHBUP00000007668	SAP	PF02037.27	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000003242	-	2181	XM_005920791	ENSHBUP00000007668	726 (aa)	XP_005920853	-

Gene Model

Click here to download ENSHBUG00000009218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000009218's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000009218	safb	70	42.757	ENSG00000160633	SAFB	95	39.858	Homo_sapiens
ENSHBUG00000009218	safb	100	72.249	ENSAPOG00000022508	safb	100	73.684	Acanthochromis_polyacanthus
ENSHBUG00000009218	safb	71	40.610	ENSAMEG00000012254	SAFB	98	38.521	Ailuropoda_melanoleuca
ENSHBUG00000009218	safb	98	87.037	ENSACIG00000006247	safb	100	87.037	Amphilophus_citrinellus
ENSHBUG00000009218	safb	100	75.160	ENSAOCG00000006308	safb	100	73.880	Amphiprion_ocellaris
ENSHBUG00000009218	safb	100	71.685	ENSAPEG00000023342	safb	100	73.238	Amphiprion_percula
ENSHBUG00000009218	safb	100	74.522	ENSATEG00000004998	safb	100	75.239	Anabas_testudineus
ENSHBUG00000009218	safb	62	43.043	ENSAPLG00000006355	-	99	44.632	Anas_platyrhynchos
ENSHBUG00000009218	safb	62	40.827	ENSAPLG00000005780	-	98	42.222	Anas_platyrhynchos
ENSHBUG00000009218	safb	70	42.832	ENSANAG00000028821	SAFB	95	40.164	Aotus_nancymaae
ENSHBUG00000009218	safb	100	86.989	ENSACLG00000001926	safb	100	86.493	Astatotilapia_calliptera
ENSHBUG00000009218	safb	98	56.450	ENSAMXG00000018154	safb	100	57.865	Astyanax_mexicanus
ENSHBUG00000009218	safb	97	40.774	ENSBTAG00000007875	SAFB	95	39.216	Bos_taurus
ENSHBUG00000009218	safb	71	40.931	ENSCAFG00000018803	SAFB	83	38.883	Canis_familiaris
ENSHBUG00000009218	safb	71	40.931	ENSCAFG00020018943	SAFB	97	38.785	Canis_lupus_dingo
ENSHBUG00000009218	safb	97	40.893	ENSCHIG00000007262	SAFB	95	39.629	Capra_hircus
ENSHBUG00000009218	safb	70	42.583	ENSCCAG00000020193	SAFB	95	39.976	Cebus_capucinus
ENSHBUG00000009218	safb	70	43.409	ENSCATG00000029994	SAFB	95	39.976	Cercocebus_atys
ENSHBUG00000009218	safb	70	42.626	ENSCSAG00000009949	SAFB	95	39.574	Chlorocebus_sabaeus
ENSHBUG00000009218	safb	62	32.675	ENSCHOG00000003208	SAFB	87	34.868	Choloepus_hoffmanni
ENSHBUG00000009218	safb	87	41.318	ENSCPBG00000010928	-	92	43.075	Chrysemys_picta_bellii
ENSHBUG00000009218	safb	76	47.100	ENSCPBG00000010936	-	93	44.458	Chrysemys_picta_bellii
ENSHBUG00000009218	safb	97	42.149	ENSCANG00000019754	-	93	39.835	Colobus_angolensis_palliatus
ENSHBUG00000009218	safb	97	38.452	ENSCANG00000004774	-	60	60.870	Colobus_angolensis_palliatus
ENSHBUG00000009218	safb	67	41.128	ENSCGRG00001002254	Safb	95	38.343	Cricetulus_griseus_chok1gshd
ENSHBUG00000009218	safb	99	76.294	ENSCSEG00000019870	safb	100	76.294	Cynoglossus_semilaevis
ENSHBUG00000009218	safb	100	63.371	ENSCVAG00000002226	safb	100	64.005	Cyprinodon_variegatus
ENSHBUG00000009218	safb	96	53.874	ENSDARG00000020467	safb	98	56.075	Danio_rerio
ENSHBUG00000009218	safb	70	41.801	ENSDNOG00000015746	SAFB	96	38.152	Dasypus_novemcinctus
ENSHBUG00000009218	safb	67	39.669	ENSDORG00000016200	Safb	95	37.402	Dipodomys_ordii
ENSHBUG00000009218	safb	67	41.653	ENSEASG00005023019	SAFB	97	40.132	Equus_asinus_asinus
ENSHBUG00000009218	safb	67	41.864	ENSECAG00000018659	SAFB	87	39.822	Equus_caballus
ENSHBUG00000009218	safb	99	57.529	ENSELUG00000022327	safb	99	55.776	Esox_lucius
ENSHBUG00000009218	safb	71	40.580	ENSFCAG00000011835	SAFB	97	38.496	Felis_catus
ENSHBUG00000009218	safb	67	42.282	ENSFALG00000013882	-	87	43.001	Ficedula_albicollis
ENSHBUG00000009218	safb	79	48.333	ENSFDAG00000020306	SAFB	59	49.138	Fukomys_damarensis
ENSHBUG00000009218	safb	100	65.113	ENSFHEG00000004219	safb	100	67.128	Fundulus_heteroclitus
ENSHBUG00000009218	safb	100	63.759	ENSGMOG00000014280	safb	100	64.619	Gadus_morhua
ENSHBUG00000009218	safb	69	42.669	ENSGALG00000013365	-	97	43.174	Gallus_gallus
ENSHBUG00000009218	safb	50	52.665	ENSGALG00000001948	-	97	43.053	Gallus_gallus
ENSHBUG00000009218	safb	100	63.471	ENSGAFG00000016162	safb	100	63.835	Gambusia_affinis
ENSHBUG00000009218	safb	100	67.689	ENSGACG00000011385	safb	66	68.036	Gasterosteus_aculeatus
ENSHBUG00000009218	safb	67	48.294	ENSGAGG00000017702	-	90	49.915	Gopherus_agassizii
ENSHBUG00000009218	safb	96	44.912	ENSGAGG00000008424	-	98	45.465	Gopherus_agassizii
ENSHBUG00000009218	safb	70	42.932	ENSGGOG00000015109	SAFB	95	39.976	Gorilla_gorilla
ENSHBUG00000009218	safb	93	61.075	ENSHCOG00000001705	safb	99	61.257	Hippocampus_comes
ENSHBUG00000009218	safb	98	57.706	ENSIPUG00000024869	safb2	99	59.308	Ictalurus_punctatus
ENSHBUG00000009218	safb	100	68.067	ENSKMAG00000022308	safb	100	69.748	Kryptolebias_marmoratus
ENSHBUG00000009218	safb	100	69.421	ENSLBEG00000006015	safb	100	65.680	Labrus_bergylta
ENSHBUG00000009218	safb	69	43.377	ENSLACG00000018090	SAFB	98	46.644	Latimeria_chalumnae
ENSHBUG00000009218	safb	98	54.715	ENSLOCG00000003613	safb	99	56.694	Lepisosteus_oculatus
ENSHBUG00000009218	safb	94	40.904	ENSLAFG00000003840	SAFB	96	40.022	Loxodonta_africana
ENSHBUG00000009218	safb	70	43.409	ENSMFAG00000003885	SAFB	95	39.976	Macaca_fascicularis
ENSHBUG00000009218	safb	70	43.409	ENSMMUG00000017970	SAFB	95	40.046	Macaca_mulatta
ENSHBUG00000009218	safb	97	41.943	ENSMNEG00000035637	SAFB	95	39.736	Macaca_nemestrina
ENSHBUG00000009218	safb	97	40.000	ENSMLEG00000038637	SAFB	95	38.488	Mandrillus_leucophaeus
ENSHBUG00000009218	safb	100	72.879	ENSMAMG00000003357	safb	91	73.357	Mastacembelus_armatus
ENSHBUG00000009218	safb	100	86.989	ENSMZEG00005009120	safb	100	86.493	Maylandia_zebra
ENSHBUG00000009218	safb	50	54.348	ENSMGAG00000001051	-	77	52.703	Meleagris_gallopavo
ENSHBUG00000009218	safb	67	39.389	ENSMGAG00000001101	-	98	41.535	Meleagris_gallopavo
ENSHBUG00000009218	safb	70	43.872	ENSMICG00000008739	-	97	40.872	Microcebus_murinus
ENSHBUG00000009218	safb	84	38.696	ENSMICG00000046795	-	66	64.706	Microcebus_murinus
ENSHBUG00000009218	safb	70	40.221	ENSMODG00000001236	SAFB	95	38.749	Monodelphis_domestica
ENSHBUG00000009218	safb	100	71.361	ENSMALG00000020330	safb	100	72.308	Monopterus_albus
ENSHBUG00000009218	safb	53	50.000	MGP_CAROLIEiJ_G0021780	Safb	97	36.774	Mus_caroli
ENSHBUG00000009218	safb	52	51.667	ENSMUSG00000071054	Safb	97	37.097	Mus_musculus
ENSHBUG00000009218	safb	52	50.833	MGP_PahariEiJ_G0020769	Safb	71	50.833	Mus_pahari
ENSHBUG00000009218	safb	71	40.449	ENSMPUG00000006123	SAFB	90	38.994	Mustela_putorius_furo
ENSHBUG00000009218	safb	98	41.348	ENSMLUG00000001081	SAFB	95	39.684	Myotis_lucifugus
ENSHBUG00000009218	safb	52	50.314	ENSNGAG00000019882	Safb	84	47.863	Nannospalax_galili
ENSHBUG00000009218	safb	70	43.409	ENSNLEG00000013551	SAFB	97	39.748	Nomascus_leucogenys
ENSHBUG00000009218	safb	62	38.530	ENSOPRG00000011561	-	99	37.332	Ochotona_princeps
ENSHBUG00000009218	safb	67	41.294	ENSODEG00000014838	SAFB	95	38.428	Octodon_degus
ENSHBUG00000009218	safb	100	84.910	ENSONIG00000002318	safb	100	84.431	Oreochromis_niloticus
ENSHBUG00000009218	safb	87	37.909	ENSOCUG00000014628	SAFB	59	39.718	Oryctolagus_cuniculus
ENSHBUG00000009218	safb	98	67.574	ENSORLG00000016989	safb	100	64.450	Oryzias_latipes
ENSHBUG00000009218	safb	98	75.207	ENSORLG00020000404	safb	100	74.899	Oryzias_latipes_hni
ENSHBUG00000009218	safb	98	68.564	ENSORLG00015010733	safb	100	64.970	Oryzias_latipes_hsok
ENSHBUG00000009218	safb	100	66.910	ENSOMEG00000009066	safb	100	63.869	Oryzias_melastigma
ENSHBUG00000009218	safb	67	42.689	ENSOGAG00000027769	SAFB	93	40.091	Otolemur_garnettii
ENSHBUG00000009218	safb	97	38.171	ENSOARG00000007662	-	65	41.892	Ovis_aries
ENSHBUG00000009218	safb	79	37.901	ENSOARG00000007856	-	97	38.517	Ovis_aries
ENSHBUG00000009218	safb	70	43.409	ENSPPAG00000035129	SAFB	95	39.858	Pan_paniscus
ENSHBUG00000009218	safb	71	40.580	ENSPPRG00000017197	SAFB	97	38.496	Panthera_pardus
ENSHBUG00000009218	safb	70	43.409	ENSPTRG00000010335	SAFB	95	39.858	Pan_troglodytes
ENSHBUG00000009218	safb	70	42.708	ENSPANG00000007770	SAFB	95	39.976	Papio_anubis
ENSHBUG00000009218	safb	99	55.153	ENSPKIG00000009902	safb	99	51.818	Paramormyrops_kingsleyae
ENSHBUG00000009218	safb	98	42.579	ENSPSIG00000011679	-	98	45.195	Pelodiscus_sinensis
ENSHBUG00000009218	safb	98	42.562	ENSPSIG00000009367	-	96	42.982	Pelodiscus_sinensis
ENSHBUG00000009218	safb	100	65.829	ENSPFOG00000007745	safb	100	66.709	Poecilia_formosa
ENSHBUG00000009218	safb	100	63.341	ENSPLAG00000001614	safb	100	63.822	Poecilia_latipinna
ENSHBUG00000009218	safb	100	65.955	ENSPMEG00000021023	safb	100	66.834	Poecilia_mexicana
ENSHBUG00000009218	safb	100	64.444	ENSPREG00000012496	safb	100	65.062	Poecilia_reticulata
ENSHBUG00000009218	safb	70	42.626	ENSPPYG00000009428	SAFB	95	39.438	Pongo_abelii
ENSHBUG00000009218	safb	90	38.998	ENSPCAG00000006475	SAFB	95	37.066	Procavia_capensis
ENSHBUG00000009218	safb	97	39.524	ENSPCOG00000014090	SAFB	97	38.751	Propithecus_coquereli
ENSHBUG00000009218	safb	57	54.040	ENSPVAG00000004913	SAFB	54	50.000	Pteropus_vampyrus
ENSHBUG00000009218	safb	99	58.197	ENSPNAG00000021838	safb	99	59.532	Pygocentrus_nattereri
ENSHBUG00000009218	safb	53	50.806	ENSRNOG00000050543	Safb	97	37.312	Rattus_norvegicus
ENSHBUG00000009218	safb	70	42.909	ENSRBIG00000042509	SAFB	95	40.260	Rhinopithecus_bieti
ENSHBUG00000009218	safb	70	42.757	ENSRROG00000029278	SAFB	95	39.976	Rhinopithecus_roxellana
ENSHBUG00000009218	safb	70	42.583	ENSSBOG00000026291	SAFB	95	39.976	Saimiri_boliviensis_boliviensis
ENSHBUG00000009218	safb	99	55.069	ENSSFOG00015008156	safb	99	52.457	Scleropages_formosus
ENSHBUG00000009218	safb	100	72.673	ENSSMAG00000009316	safb	100	70.215	Scophthalmus_maximus
ENSHBUG00000009218	safb	100	81.582	ENSSDUG00000009652	safb	100	81.582	Seriola_dumerili
ENSHBUG00000009218	safb	100	73.571	ENSSLDG00000001670	safb	100	70.659	Seriola_lalandi_dorsalis
ENSHBUG00000009218	safb	62	39.421	ENSSARG00000010475	SAFB	100	39.236	Sorex_araneus
ENSHBUG00000009218	safb	53	44.027	ENSSPUG00000009747	-	94	40.964	Sphenodon_punctatus
ENSHBUG00000009218	safb	100	78.403	ENSSPAG00000015682	safb	100	78.927	Stegastes_partitus
ENSHBUG00000009218	safb	94	39.175	ENSSSCG00000013522	SAFB	93	41.351	Sus_scrofa
ENSHBUG00000009218	safb	67	41.569	ENSTGUG00000000502	-	97	42.808	Taeniopygia_guttata
ENSHBUG00000009218	safb	100	68.389	ENSTRUG00000003567	safb	100	69.351	Takifugu_rubripes
ENSHBUG00000009218	safb	69	66.167	ENSTNIG00000015470	safb	100	57.407	Tetraodon_nigroviridis
ENSHBUG00000009218	safb	84	75.000	ENSTTRG00000013588	SAFB	82	75.000	Tursiops_truncatus
ENSHBUG00000009218	safb	77	40.816	ENSUMAG00000009734	SAFB	85	41.297	Ursus_maritimus
ENSHBUG00000009218	safb	71	41.573	ENSVVUG00000013720	SAFB	83	39.353	Vulpes_vulpes
ENSHBUG00000009218	safb	100	66.080	ENSXMAG00000003458	safb	100	67.085	Xiphophorus_maculatus