EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHBUG00000009348 (Gene tree)
Gene ID
-
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Haplochromis_burtoni
Status
putative
Strand
Minus strand
Length
53183 bases
Position
chrJH425857.1:127003-180185
Accession
102313238
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHBUP00000007812tRNA_anti-codonPF01336.256.1e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHBUT00000003005RPA1 (1 of many)-2011674XM_014329225ENSHBUP00000007812557 (aa)XP_014184711-
Gene Model
Click here to download ENSHBUG00000009348's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000009348's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHBUG00000009348RPA19958.904ENSHBUG00000017773rpa19658.904
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHBUG00000009348RPA19876.596ENSAPOG00000019409RPA18176.596Acanthochromis_polyacanthus
ENSHBUG00000009348RPA19759.436ENSAPOG00000011658rpa19959.436Acanthochromis_polyacanthus
ENSHBUG00000009348RPA19954.319ENSAMEG00000007706RPA19654.319Ailuropoda_melanoleuca
ENSHBUG00000009348RPA19852.305ENSACIG00000007277rpa19952.305Amphilophus_citrinellus
ENSHBUG00000009348RPA19974.916ENSACIG00000012881RPA110074.916Amphilophus_citrinellus
ENSHBUG00000009348RPA19858.377ENSAOCG00000023376rpa19958.451Amphiprion_ocellaris
ENSHBUG00000009348RPA19864.960ENSAOCG00000009003RPA19664.960Amphiprion_ocellaris
ENSHBUG00000009348RPA19878.723ENSAPEG00000019132RPA18378.723Amphiprion_percula
ENSHBUG00000009348RPA19858.204ENSAPEG00000008634rpa19958.451Amphiprion_percula
ENSHBUG00000009348RPA19858.421ENSATEG00000022024rpa19958.421Anabas_testudineus
ENSHBUG00000009348RPA19864.115ENSATEG00000006443RPA19664.115Anabas_testudineus
ENSHBUG00000009348RPA19946.945ENSAPLG00000012442RPA19947.015Anas_platyrhynchos
ENSHBUG00000009348RPA19850.348ENSACAG00000014490RPA19450.523Anolis_carolinensis
ENSHBUG00000009348RPA19955.979ENSANAG00000023456RPA19855.979Aotus_nancymaae
ENSHBUG00000009348RPA19659.752ENSACLG00000006640rpa19959.752Astatotilapia_calliptera
ENSHBUG00000009348RPA19974.878ENSACLG00000005223RPA19674.878Astatotilapia_calliptera
ENSHBUG00000009348RPA19959.011ENSAMXG00000008418rpa19959.011Astyanax_mexicanus
ENSHBUG00000009348RPA19953.422ENSBTAG00000009711RPA19653.422Bos_taurus
ENSHBUG00000009348RPA19953.667ENSCJAG00000001848RPA19654.077Callithrix_jacchus
ENSHBUG00000009348RPA19954.077ENSCAFG00000019249RPA19654.409Canis_familiaris
ENSHBUG00000009348RPA19954.077ENSCAFG00020009847RPA19654.409Canis_lupus_dingo
ENSHBUG00000009348RPA19953.667ENSCHIG00000026308RPA19653.667Capra_hircus
ENSHBUG00000009348RPA19953.846ENSTSYG00000003482-9653.846Carlito_syrichta
ENSHBUG00000009348RPA19952.588ENSCPOG00000000035RPA19652.588Cavia_porcellus
ENSHBUG00000009348RPA19946.564ENSCCAG00000010981RPA19646.998Cebus_capucinus
ENSHBUG00000009348RPA19949.917ENSCLAG00000015045-9649.917Chinchilla_lanigera
ENSHBUG00000009348RPA19952.421ENSCLAG00000005185-9652.421Chinchilla_lanigera
ENSHBUG00000009348RPA19945.904ENSCSAG00000013833RPA19646.246Chlorocebus_sabaeus
ENSHBUG00000009348RPA19852.196ENSCHOG00000013540-9952.196Choloepus_hoffmanni
ENSHBUG00000009348RPA17658.597ENSCHOG00000009454-9958.597Choloepus_hoffmanni
ENSHBUG00000009348RPA19952.517ENSCPBG00000020377RPA19952.972Chrysemys_picta_bellii
ENSHBUG00000009348RPA19638.593ENSCING00000023482-9338.593Ciona_intestinalis
ENSHBUG00000009348RPA19955.382ENSCANG00000030911RPA19855.382Colobus_angolensis_palliatus
ENSHBUG00000009348RPA19953.500ENSCGRG00001008197Rpa19653.500Cricetulus_griseus_chok1gshd
ENSHBUG00000009348RPA17857.616ENSCGRG00000000582Rpa18857.616Cricetulus_griseus_crigri
ENSHBUG00000009348RPA19957.539ENSCSEG00000013066rpa19757.539Cynoglossus_semilaevis
ENSHBUG00000009348RPA19856.977ENSCSEG00000012726RPA19957.534Cynoglossus_semilaevis
ENSHBUG00000009348RPA19857.290ENSCVAG00000019431rpa19958.615Cyprinodon_variegatus
ENSHBUG00000009348RPA19468.018ENSCVAG00000013446-9268.018Cyprinodon_variegatus
ENSHBUG00000009348RPA19957.601ENSDARG00000003938rpa19657.601Danio_rerio
ENSHBUG00000009348RPA19953.255ENSDNOG00000017218RPA19653.255Dasypus_novemcinctus
ENSHBUG00000009348RPA19954.257ENSDORG00000006199Rpa19754.530Dipodomys_ordii
ENSHBUG00000009348RPA19835.243FBgn0010173RpA-709435.764Drosophila_melanogaster
ENSHBUG00000009348RPA18158.763ENSETEG00000017608RPA17958.763Echinops_telfairi
ENSHBUG00000009348RPA19956.153ENSEASG00005009372RPA19956.150Equus_asinus_asinus
ENSHBUG00000009348RPA19954.167ENSECAG00000023886RPA19654.167Equus_caballus
ENSHBUG00000009348RPA17257.547ENSEEUG00000002186-6857.547Erinaceus_europaeus
ENSHBUG00000009348RPA19057.895ENSELUG00000006136RPA19957.895Esox_lucius
ENSHBUG00000009348RPA19857.831ENSELUG00000021071rpa19557.831Esox_lucius
ENSHBUG00000009348RPA19954.667ENSFCAG00000006306RPA19654.667Felis_catus
ENSHBUG00000009348RPA19952.181ENSFALG00000006575RPA19652.181Ficedula_albicollis
ENSHBUG00000009348RPA19953.577ENSFDAG00000007720RPA19653.577Fukomys_damarensis
ENSHBUG00000009348RPA19856.899ENSFHEG00000003580rpa19556.899Fundulus_heteroclitus
ENSHBUG00000009348RPA19858.304ENSGMOG00000010382rpa19558.304Gadus_morhua
ENSHBUG00000009348RPA19951.510ENSGALG00000003072RPA19651.510Gallus_gallus
ENSHBUG00000009348RPA19858.304ENSGAFG00000012916rpa19658.290Gambusia_affinis
ENSHBUG00000009348RPA19962.085ENSGAFG00000020953RPA19662.085Gambusia_affinis
ENSHBUG00000009348RPA19857.469ENSGACG00000010856rpa19557.469Gasterosteus_aculeatus
ENSHBUG00000009348RPA19952.685ENSGAGG00000013611RPA19652.685Gopherus_agassizii
ENSHBUG00000009348RPA19955.749ENSGGOG00000014186RPA19655.749Gorilla_gorilla
ENSHBUG00000009348RPA19952.922ENSHGLG00000008846RPA19653.333Heterocephalus_glaber_female
ENSHBUG00000009348RPA19943.907ENSHGLG00100002005-9643.907Heterocephalus_glaber_male
ENSHBUG00000009348RPA19952.922ENSHGLG00100017755-9653.333Heterocephalus_glaber_male
ENSHBUG00000009348RPA19950.000ENSHGLG00100000799-9650.000Heterocephalus_glaber_male
ENSHBUG00000009348RPA19851.877ENSHCOG00000001401rpa19552.048Hippocampus_comes
ENSHBUG00000009348RPA19946.516ENSHCOG00000000351RPA19546.516Hippocampus_comes
ENSHBUG00000009348RPA19857.725ENSIPUG00000004400rpa19557.725Ictalurus_punctatus
ENSHBUG00000009348RPA19851.602ENSSTOG00000022475RPA19851.602Ictidomys_tridecemlineatus
ENSHBUG00000009348RPA19853.378ENSJJAG00000000876Rpa19853.378Jaculus_jaculus
ENSHBUG00000009348RPA19855.853ENSKMAG00000005605rpa19556.376Kryptolebias_marmoratus
ENSHBUG00000009348RPA19966.267ENSKMAG00000000234RPA19666.267Kryptolebias_marmoratus
ENSHBUG00000009348RPA19970.149ENSLBEG00000002281RPA18670.149Labrus_bergylta
ENSHBUG00000009348RPA19857.496ENSLBEG00000021604rpa19557.496Labrus_bergylta
ENSHBUG00000009348RPA17654.709ENSLACG00000007210RPA18954.709Latimeria_chalumnae
ENSHBUG00000009348RPA19854.762ENSLOCG00000006397rpa19554.932Lepisosteus_oculatus
ENSHBUG00000009348RPA19951.967ENSLAFG00000015354RPA19651.967Loxodonta_africana
ENSHBUG00000009348RPA18552.485ENSMFAG00000036138-9852.883Macaca_fascicularis
ENSHBUG00000009348RPA19953.000ENSMMUG00000011604-9853.333Macaca_mulatta
ENSHBUG00000009348RPA19949.663ENSMMUG00000002442-9649.663Macaca_mulatta
ENSHBUG00000009348RPA19852.782ENSMNEG00000031632-9853.120Macaca_nemestrina
ENSHBUG00000009348RPA19948.264ENSMNEG00000029837-9648.264Macaca_nemestrina
ENSHBUG00000009348RPA19949.420ENSMLEG00000038768-9849.751Mandrillus_leucophaeus
ENSHBUG00000009348RPA19757.961ENSMAMG00000017993rpa19957.961Mastacembelus_armatus
ENSHBUG00000009348RPA19869.038ENSMAMG00000020097RPA18770.701Mastacembelus_armatus
ENSHBUG00000009348RPA19974.878ENSMZEG00005024731RPA19674.878Maylandia_zebra
ENSHBUG00000009348RPA19858.131ENSMZEG00005007551rpa19954.872Maylandia_zebra
ENSHBUG00000009348RPA19951.342ENSMGAG00000005315RPA19651.342Meleagris_gallopavo
ENSHBUG00000009348RPA19954.013ENSMAUG00000010474Rpa19853.833Mesocricetus_auratus
ENSHBUG00000009348RPA19954.530ENSMICG00000012867RPA19654.348Microcebus_murinus
ENSHBUG00000009348RPA19953.679ENSMOCG00000013019Rpa19653.679Microtus_ochrogaster
ENSHBUG00000009348RPA19969.338ENSMMOG00000010868RPA19569.338Mola_mola
ENSHBUG00000009348RPA19956.876ENSMMOG00000014292rpa19957.560Mola_mola
ENSHBUG00000009348RPA19953.923ENSMODG00000010549RPA19653.923Monodelphis_domestica
ENSHBUG00000009348RPA19873.303ENSMALG00000001208RPA19773.303Monopterus_albus
ENSHBUG00000009348RPA19857.913ENSMALG00000011453rpa19557.913Monopterus_albus
ENSHBUG00000009348RPA19953.821MGP_CAROLIEiJ_G0016734Rpa19653.821Mus_caroli
ENSHBUG00000009348RPA19953.289ENSMUSG00000000751Rpa19653.289Mus_musculus
ENSHBUG00000009348RPA19953.897MGP_PahariEiJ_G0017871Rpa19653.897Mus_pahari
ENSHBUG00000009348RPA19953.366MGP_SPRETEiJ_G0017577Rpa19653.366Mus_spretus
ENSHBUG00000009348RPA19954.409ENSMPUG00000013119RPA19654.409Mustela_putorius_furo
ENSHBUG00000009348RPA19853.231ENSMLUG00000006113RPA19453.231Myotis_lucifugus
ENSHBUG00000009348RPA19854.040ENSNGAG00000004522Rpa19454.040Nannospalax_galili
ENSHBUG00000009348RPA19979.401ENSNBRG00000009672RPA19479.401Neolamprologus_brichardi
ENSHBUG00000009348RPA19759.051ENSNBRG00000020595rpa19959.051Neolamprologus_brichardi
ENSHBUG00000009348RPA19953.434ENSNLEG00000017149RPA19653.434Nomascus_leucogenys
ENSHBUG00000009348RPA19947.324ENSMEUG00000006714RPA19747.324Notamacropus_eugenii
ENSHBUG00000009348RPA19951.639ENSODEG00000009038RPA19751.639Octodon_degus
ENSHBUG00000009348RPA19857.095ENSONIG00000013135rpa19557.095Oreochromis_niloticus
ENSHBUG00000009348RPA19953.322ENSOANG00000010880RPA19853.322Ornithorhynchus_anatinus
ENSHBUG00000009348RPA19951.592ENSOCUG00000001504RPA19651.592Oryctolagus_cuniculus
ENSHBUG00000009348RPA19857.904ENSORLG00000004856rpa19557.904Oryzias_latipes
ENSHBUG00000009348RPA19471.812ENSORLG00000003368RPA18271.812Oryzias_latipes
ENSHBUG00000009348RPA19857.904ENSORLG00020008980rpa19557.904Oryzias_latipes_hni
ENSHBUG00000009348RPA19471.333ENSORLG00020015284RPA18171.333Oryzias_latipes_hni
ENSHBUG00000009348RPA19861.997ENSORLG00015020383RPA19661.997Oryzias_latipes_hsok
ENSHBUG00000009348RPA17270.433ENSORLG00015005867-9470.433Oryzias_latipes_hsok
ENSHBUG00000009348RPA19857.904ENSORLG00015013982rpa19557.904Oryzias_latipes_hsok
ENSHBUG00000009348RPA19668.288ENSOMEG00000011040RPA19968.288Oryzias_melastigma
ENSHBUG00000009348RPA19856.870ENSOMEG00000004704rpa19855.240Oryzias_melastigma
ENSHBUG00000009348RPA19953.333ENSOGAG00000005581-9653.333Otolemur_garnettii
ENSHBUG00000009348RPA17460.733ENSOGAG00000029379-9560.733Otolemur_garnettii
ENSHBUG00000009348RPA19953.667ENSOARG00000014479RPA19653.667Ovis_aries
ENSHBUG00000009348RPA19954.195ENSPPAG00000039680RPA19654.195Pan_paniscus
ENSHBUG00000009348RPA19955.000ENSPPRG00000011807RPA19655.000Panthera_pardus
ENSHBUG00000009348RPA19955.000ENSPTIG00000007898RPA19655.000Panthera_tigris_altaica
ENSHBUG00000009348RPA19953.859ENSPTRG00000008539RPA19654.027Pan_troglodytes
ENSHBUG00000009348RPA19953.167ENSPANG00000024592RPA19653.500Papio_anubis
ENSHBUG00000009348RPA19456.810ENSPKIG00000008053rpa19157.500Paramormyrops_kingsleyae
ENSHBUG00000009348RPA19952.189ENSPSIG00000015617RPA19852.189Pelodiscus_sinensis
ENSHBUG00000009348RPA19959.194ENSPMGG00000011589rpa19958.854Periophthalmus_magnuspinnatus
ENSHBUG00000009348RPA19964.223ENSPMGG00000000543RPA19964.337Periophthalmus_magnuspinnatus
ENSHBUG00000009348RPA19953.266ENSPEMG00000021061Rpa19653.266Peromyscus_maniculatus_bairdii
ENSHBUG00000009348RPA19953.333ENSPCIG00000019049RPA19653.667Phascolarctos_cinereus
ENSHBUG00000009348RPA19857.439ENSPFOG00000003987rpa19557.439Poecilia_formosa
ENSHBUG00000009348RPA19857.439ENSPLAG00000004984rpa19557.439Poecilia_latipinna
ENSHBUG00000009348RPA19361.008ENSPLAG00000008844-9361.008Poecilia_latipinna
ENSHBUG00000009348RPA19361.008ENSPMEG00000003627-9261.008Poecilia_mexicana
ENSHBUG00000009348RPA19857.439ENSPMEG00000020602rpa19957.118Poecilia_mexicana
ENSHBUG00000009348RPA19372.043ENSPREG00000010119RPA17972.043Poecilia_reticulata
ENSHBUG00000009348RPA19350.447ENSPREG00000010174rpa19250.269Poecilia_reticulata
ENSHBUG00000009348RPA19954.104ENSPCOG00000001799RPA19654.104Propithecus_coquereli
ENSHBUG00000009348RPA19954.090ENSPVAG00000002149RPA19654.090Pteropus_vampyrus
ENSHBUG00000009348RPA19759.717ENSPNYG00000016316rpa19959.717Pundamilia_nyererei
ENSHBUG00000009348RPA19974.878ENSPNYG00000024165RPA19674.878Pundamilia_nyererei
ENSHBUG00000009348RPA19849.483ENSPNAG00000008599rpa19649.147Pygocentrus_nattereri
ENSHBUG00000009348RPA19958.738ENSRNOG00000003123Rpa19654.606Rattus_norvegicus
ENSHBUG00000009348RPA19953.255ENSRBIG00000036587RPA19653.255Rhinopithecus_bieti
ENSHBUG00000009348RPA19951.966ENSRROG00000043278RPA19651.966Rhinopithecus_roxellana
ENSHBUG00000009348RPA17630.684YAR007CRFA17230.684Saccharomyces_cerevisiae
ENSHBUG00000009348RPA19354.270ENSSBOG00000030233RPA19754.707Saimiri_boliviensis_boliviensis
ENSHBUG00000009348RPA19954.167ENSSHAG00000007969RPA19554.409Sarcophilus_harrisii
ENSHBUG00000009348RPA19859.826ENSSFOG00015005362rpa18859.826Scleropages_formosus
ENSHBUG00000009348RPA19862.166ENSSMAG00000019746RPA19662.166Scophthalmus_maximus
ENSHBUG00000009348RPA19877.419ENSSDUG00000016358RPA18276.697Seriola_dumerili
ENSHBUG00000009348RPA19960.000ENSSDUG00000011949rpa19660.000Seriola_dumerili
ENSHBUG00000009348RPA19959.646ENSSLDG00000011806rpa19659.646Seriola_lalandi_dorsalis
ENSHBUG00000009348RPA19277.419ENSSLDG00000020784RPA17877.419Seriola_lalandi_dorsalis
ENSHBUG00000009348RPA19065.625ENSSARG00000007506RPA18765.625Sorex_araneus
ENSHBUG00000009348RPA19952.712ENSSPUG00000007223RPA19852.712Sphenodon_punctatus
ENSHBUG00000009348RPA19857.465ENSSPAG00000009903rpa19557.465Stegastes_partitus
ENSHBUG00000009348RPA19870.157ENSSPAG00000011165RPA19769.739Stegastes_partitus
ENSHBUG00000009348RPA19955.749ENSSSCG00000017822RPA19854.271Sus_scrofa
ENSHBUG00000009348RPA19952.020ENSTGUG00000005775RPA19652.020Taeniopygia_guttata
ENSHBUG00000009348RPA19072.326ENSTRUG00000000405RPA17371.655Takifugu_rubripes
ENSHBUG00000009348RPA19856.649ENSTRUG00000003616rpa19556.649Takifugu_rubripes
ENSHBUG00000009348RPA19856.734ENSTNIG00000016199rpa19556.902Tetraodon_nigroviridis
ENSHBUG00000009348RPA17658.371ENSTBEG00000002709RPA17358.371Tupaia_belangeri
ENSHBUG00000009348RPA19953.589ENSTTRG00000001169RPA19653.589Tursiops_truncatus
ENSHBUG00000009348RPA18975.000ENSUAMG00000015676RPA19375.000Ursus_americanus
ENSHBUG00000009348RPA19956.250ENSUMAG00000009328RPA19656.250Ursus_maritimus
ENSHBUG00000009348RPA19951.672ENSVPAG00000009443RPA19751.672Vicugna_pacos
ENSHBUG00000009348RPA19954.243ENSVVUG00000021715RPA19654.576Vulpes_vulpes
ENSHBUG00000009348RPA19955.161ENSXETG00000013538rpa19655.574Xenopus_tropicalis
ENSHBUG00000009348RPA19866.372ENSXCOG00000009899-10066.372Xiphophorus_couchianus
ENSHBUG00000009348RPA19357.196ENSXCOG00000010068rpa19555.516Xiphophorus_couchianus
ENSHBUG00000009348RPA19857.439ENSXMAG00000004102rpa19957.473Xiphophorus_maculatus
ENSHBUG00000009348RPA19372.009ENSXMAG00000010333RPA18072.009Xiphophorus_maculatus

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