EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHBUG00000009634 (Gene tree)
Gene ID
102311244
Gene Symbol
-
Alias
-
Full Name
poly(U)-binding-splicing factor PUF60-like
Gene Type
protein_coding
Species
Haplochromis_burtoni
Status
putative
Strand
Plus strand
Length
7740 bases
Position
chrJH425814.1:327778-335517
Accession
102311244
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHBUP00000026758RRM_1PF00076.228.2e-4512
ENSHBUP00000026758RRM_1PF00076.228.2e-4522
ENSHBUP00000008105RRM_1PF00076.221.1e-4412
ENSHBUP00000008105RRM_1PF00076.221.1e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHBUT00000002511-4654XM_005946413ENSHBUP00000008105522 (aa)XP_005946475UPI0003BCDEC5
ENSHBUT00000002536-1479XM_005946415ENSHBUP00000026758492 (aa)XP_005946477-
Gene Model
Click here to download ENSHBUG00000009634's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000009634's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHBUG00000009634-6636.000ENSHBUG00000017424-6935.294
ENSHBUG00000009634-5635.000ENSHBUG00000013935u2af2a7136.275
ENSHBUG00000009634-10083.903ENSHBUG00000015118puf60b10083.903
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHBUG00000009634-10082.540ENSG00000179950PUF6010082.540Homo_sapiens
ENSHBUG00000009634-10083.903ENSAPOG00000001713puf60b10082.922Acanthochromis_polyacanthus
ENSHBUG00000009634-9979.886ENSAMEG00000006406PUF609379.886Ailuropoda_melanoleuca
ENSHBUG00000009634-9883.658ENSACIG00000021705puf60b10083.658Amphilophus_citrinellus
ENSHBUG00000009634-9891.569ENSACIG00000003263-10091.033Amphilophus_citrinellus
ENSHBUG00000009634-10091.954ENSAOCG00000015558-10091.571Amphiprion_ocellaris
ENSHBUG00000009634-10083.903ENSAOCG00000005395puf60b10083.658Amphiprion_ocellaris
ENSHBUG00000009634-10081.690ENSAPEG00000001836-9981.818Amphiprion_percula
ENSHBUG00000009634-10081.690ENSAPEG00000011923puf60b9781.690Amphiprion_percula
ENSHBUG00000009634-10082.732ENSATEG00000001730puf60b10082.732Anabas_testudineus
ENSHBUG00000009634-10093.103ENSATEG00000006303-10093.103Anabas_testudineus
ENSHBUG00000009634-9981.404ENSAPLG00000010150PUF6010081.784Anas_platyrhynchos
ENSHBUG00000009634-9881.143ENSACAG00000001645PUF609681.489Anolis_carolinensis
ENSHBUG00000009634-10082.738ENSANAG00000018626PUF6010082.534Aotus_nancymaae
ENSHBUG00000009634-10083.903ENSACLG00000004462puf60b10083.903Astatotilapia_calliptera
ENSHBUG00000009634-10084.337ENSAMXG00000036570puf60a9785.141Astyanax_mexicanus
ENSHBUG00000009634-10076.275ENSAMXG00000041030puf60b10078.039Astyanax_mexicanus
ENSHBUG00000009634-10082.540ENSBTAG00000037493PUF609981.594Bos_taurus
ENSHBUG00000009634-7952.574WBGene00004389rnp-68352.797Caenorhabditis_elegans
ENSHBUG00000009634-10082.540ENSCJAG00000021485PUF609981.015Callithrix_jacchus
ENSHBUG00000009634-10082.738ENSCAFG00000001400PUF609282.738Canis_familiaris
ENSHBUG00000009634-10082.738ENSCAFG00020018754PUF609981.203Canis_lupus_dingo
ENSHBUG00000009634-9981.025ENSCHIG00000001618PUF608781.594Capra_hircus
ENSHBUG00000009634-10081.128ENSTSYG00000011912PUF6010082.534Carlito_syrichta
ENSHBUG00000009634-10077.362ENSCPOG00000014613PUF609477.213Cavia_porcellus
ENSHBUG00000009634-10082.143ENSCCAG00000007744PUF609981.015Cebus_capucinus
ENSHBUG00000009634-10082.540ENSCATG00000035405PUF609981.015Cercocebus_atys
ENSHBUG00000009634-10082.738ENSCLAG00000009154PUF609381.784Chinchilla_lanigera
ENSHBUG00000009634-9882.342ENSCSAG00000008878PUF6010082.342Chlorocebus_sabaeus
ENSHBUG00000009634-9882.150ENSCPBG00000005595PUF609980.943Chrysemys_picta_bellii
ENSHBUG00000009634-6659.064ENSCING00000002156-9259.184Ciona_intestinalis
ENSHBUG00000009634-9849.304ENSCING00000008436-9549.023Ciona_intestinalis
ENSHBUG00000009634-9752.783ENSCSAVG00000001385-9953.307Ciona_savignyi
ENSHBUG00000009634-9745.639ENSCSAVG00000004765-9750.308Ciona_savignyi
ENSHBUG00000009634-8081.728ENSCANG00000041843PUF6010081.991Colobus_angolensis_palliatus
ENSHBUG00000009634-10082.937ENSCGRG00001017442Puf609381.973Cricetulus_griseus_chok1gshd
ENSHBUG00000009634-9981.973ENSCGRG00000003717Puf609381.973Cricetulus_griseus_crigri
ENSHBUG00000009634-10084.818ENSCSEG00000014845-8985.020Cynoglossus_semilaevis
ENSHBUG00000009634-9983.301ENSCSEG00000019887puf60b9383.301Cynoglossus_semilaevis
ENSHBUG00000009634-10082.897ENSCVAG00000009386puf60b10083.300Cyprinodon_variegatus
ENSHBUG00000009634-9288.043ENSCVAG00000001560-9789.827Cyprinodon_variegatus
ENSHBUG00000009634-10076.459ENSDARG00000001241puf60b9991.566Danio_rerio
ENSHBUG00000009634-9882.917ENSDARG00000032175puf60a10090.254Danio_rerio
ENSHBUG00000009634-9667.969ENSDNOG00000043278PUF609068.555Dasypus_novemcinctus
ENSHBUG00000009634-10082.738ENSDORG00000004585Puf609581.784Dipodomys_ordii
ENSHBUG00000009634-8467.399FBgn0028577hfp9948.168Drosophila_melanogaster
ENSHBUG00000009634-9771.074ENSEBUG00000005470-8871.074Eptatretus_burgeri
ENSHBUG00000009634-10062.762ENSEBUG00000014291puf60b8465.385Eptatretus_burgeri
ENSHBUG00000009634-10082.738ENSEASG00005009695PUF609981.203Equus_asinus_asinus
ENSHBUG00000009634-10082.738ENSECAG00000024681PUF609881.203Equus_caballus
ENSHBUG00000009634-10086.774ENSELUG00000018443-10086.389Esox_lucius
ENSHBUG00000009634-10079.740ENSELUG00000006507puf60b10078.532Esox_lucius
ENSHBUG00000009634-10082.738ENSFCAG00000001045PUF6010082.534Felis_catus
ENSHBUG00000009634-9971.537ENSFALG00000001136PUF609872.486Ficedula_albicollis
ENSHBUG00000009634-10082.937ENSFDAG00000017177PUF609381.973Fukomys_damarensis
ENSHBUG00000009634-10083.300ENSFHEG00000020046puf60b10083.702Fundulus_heteroclitus
ENSHBUG00000009634-9489.571ENSFHEG00000021687PUF6010089.958Fundulus_heteroclitus
ENSHBUG00000009634-10068.911ENSGMOG00000006392puf60b10069.333Gadus_morhua
ENSHBUG00000009634-6486.880ENSGALG00000039901PUF609486.880Gallus_gallus
ENSHBUG00000009634-10085.425ENSGAFG00000004334-10085.352Gambusia_affinis
ENSHBUG00000009634-10082.353ENSGAFG00000021040puf60b10083.463Gambusia_affinis
ENSHBUG00000009634-10076.281ENSGACG00000001484-10077.407Gasterosteus_aculeatus
ENSHBUG00000009634-9971.048ENSGACG00000004717puf60b9971.048Gasterosteus_aculeatus
ENSHBUG00000009634-10082.341ENSGAGG00000013289PUF609182.341Gopherus_agassizii
ENSHBUG00000009634-10082.540ENSGGOG00000004646PUF609981.203Gorilla_gorilla
ENSHBUG00000009634-10082.937ENSHGLG00000006111PUF609381.973Heterocephalus_glaber_female
ENSHBUG00000009634-10082.937ENSHGLG00100012362PUF609381.973Heterocephalus_glaber_male
ENSHBUG00000009634-9673.360ENSHCOG00000000378-9970.455Hippocampus_comes
ENSHBUG00000009634-10080.426ENSHCOG00000015541puf60b10080.561Hippocampus_comes
ENSHBUG00000009634-10083.669ENSIPUG00000002453puf60a10082.534Ictalurus_punctatus
ENSHBUG00000009634-10078.431ENSIPUG00000004660puf60b10077.609Ictalurus_punctatus
ENSHBUG00000009634-9981.784ENSSTOG00000025037PUF609481.784Ictidomys_tridecemlineatus
ENSHBUG00000009634-10082.937ENSJJAG00000001076Puf609381.973Jaculus_jaculus
ENSHBUG00000009634-9885.249ENSKMAG00000010106-10085.249Kryptolebias_marmoratus
ENSHBUG00000009634-9883.268ENSKMAG00000016745puf60b10083.658Kryptolebias_marmoratus
ENSHBUG00000009634-9980.769ENSLBEG00000012505puf60b10080.769Labrus_bergylta
ENSHBUG00000009634-7378.591ENSLACG00000005456PUF6010078.591Latimeria_chalumnae
ENSHBUG00000009634-10085.633ENSLOCG00000010106puf60b10085.633Lepisosteus_oculatus
ENSHBUG00000009634-9980.645ENSLAFG00000022929PUF609480.645Loxodonta_africana
ENSHBUG00000009634-10082.540ENSMFAG00000043373PUF609981.629Macaca_fascicularis
ENSHBUG00000009634-10082.540ENSMMUG00000013558PUF609981.203Macaca_mulatta
ENSHBUG00000009634-10082.540ENSMNEG00000031099PUF609981.015Macaca_nemestrina
ENSHBUG00000009634-10082.540ENSMLEG00000040009PUF6010082.540Mandrillus_leucophaeus
ENSHBUG00000009634-10094.837ENSMAMG00000019476-10094.837Mastacembelus_armatus
ENSHBUG00000009634-9982.917ENSMAMG00000010394puf60b10081.061Mastacembelus_armatus
ENSHBUG00000009634-10083.903ENSMZEG00005018515puf60b10083.903Maylandia_zebra
ENSHBUG00000009634-10099.808ENSMZEG00005019425-10099.808Maylandia_zebra
ENSHBUG00000009634-9981.132ENSMGAG00000013070PUF609587.209Meleagris_gallopavo
ENSHBUG00000009634-6786.880ENSMAUG00000014267-9085.246Mesocricetus_auratus
ENSHBUG00000009634-9668.378ENSMAUG00000018549-9568.443Mesocricetus_auratus
ENSHBUG00000009634-9981.784ENSMICG00000012226PUF609981.698Microcebus_murinus
ENSHBUG00000009634-10082.937ENSMOCG00000018780Puf609381.973Microtus_ochrogaster
ENSHBUG00000009634-10081.136ENSMMOG00000018059-9982.870Mola_mola
ENSHBUG00000009634-9883.463ENSMMOG00000004217puf60b10083.463Mola_mola
ENSHBUG00000009634-10082.738ENSMODG00000009161PUF609382.738Monodelphis_domestica
ENSHBUG00000009634-9976.346ENSMALG00000006797puf60b10075.712Monopterus_albus
ENSHBUG00000009634-10092.925ENSMALG00000000200-10092.352Monopterus_albus
ENSHBUG00000009634-10083.135MGP_CAROLIEiJ_G0019910Puf609382.163Mus_caroli
ENSHBUG00000009634-10083.135ENSMUSG00000002524Puf609382.163Mus_musculus
ENSHBUG00000009634-10083.135MGP_PahariEiJ_G0019920Puf609382.163Mus_pahari
ENSHBUG00000009634-10083.135MGP_SPRETEiJ_G0020812Puf609382.163Mus_spretus
ENSHBUG00000009634-9981.594ENSMPUG00000008137PUF609281.594Mustela_putorius_furo
ENSHBUG00000009634-10079.563ENSMLUG00000013032-9779.563Myotis_lucifugus
ENSHBUG00000009634-9981.214ENSMLUG00000000238-9381.214Myotis_lucifugus
ENSHBUG00000009634-10082.937ENSNGAG00000000712Puf6010082.726Nannospalax_galili
ENSHBUG00000009634-10099.042ENSNBRG00000017223-10099.042Neolamprologus_brichardi
ENSHBUG00000009634-8380.580ENSNBRG00000013047puf60b9782.775Neolamprologus_brichardi
ENSHBUG00000009634-10082.540ENSNLEG00000002156PUF609981.203Nomascus_leucogenys
ENSHBUG00000009634-7091.667ENSOPRG00000002147PUF607591.126Ochotona_princeps
ENSHBUG00000009634-9858.777ENSODEG00000015513-9860.308Octodon_degus
ENSHBUG00000009634-7188.235ENSODEG00000014024-9087.500Octodon_degus
ENSHBUG00000009634-9983.462ENSONIG00000006247puf60b9883.462Oreochromis_niloticus
ENSHBUG00000009634-10098.659ENSONIG00000014030-9998.659Oreochromis_niloticus
ENSHBUG00000009634-9766.406ENSOANG00000006962PUF609967.059Ornithorhynchus_anatinus
ENSHBUG00000009634-10083.501ENSORLG00000012279puf60b10083.268Oryzias_latipes
ENSHBUG00000009634-9888.350ENSORLG00000028655-9988.350Oryzias_latipes
ENSHBUG00000009634-9989.293ENSORLG00020018144-9989.293Oryzias_latipes_hni
ENSHBUG00000009634-10082.543ENSORLG00020007333puf6010083.268Oryzias_latipes_hni
ENSHBUG00000009634-10082.987ENSORLG00015007718puf60b10083.721Oryzias_latipes_hsok
ENSHBUG00000009634-9989.101ENSORLG00015016833-9989.101Oryzias_latipes_hsok
ENSHBUG00000009634-9990.057ENSOMEG00000022185-9990.057Oryzias_melastigma
ENSHBUG00000009634-10081.579ENSOMEG00000001643puf60b10081.579Oryzias_melastigma
ENSHBUG00000009634-9981.784ENSOGAG00000006259PUF609381.784Otolemur_garnettii
ENSHBUG00000009634-10079.377ENSOARG00000016235PUF609880.153Ovis_aries
ENSHBUG00000009634-10082.540ENSPPAG00000029933PUF609981.051Pan_paniscus
ENSHBUG00000009634-10082.738ENSPPRG00000003257PUF6010082.738Panthera_pardus
ENSHBUG00000009634-10081.944ENSPTIG00000009795PUF609880.658Panthera_tigris_altaica
ENSHBUG00000009634-10082.540ENSPTRG00000043963-9981.203Pan_troglodytes
ENSHBUG00000009634-10082.540ENSPTRG00000020670PUF609981.051Pan_troglodytes
ENSHBUG00000009634-10082.540ENSPANG00000021936PUF609981.015Papio_anubis
ENSHBUG00000009634-10085.141ENSPKIG00000012204puf60b10085.049Paramormyrops_kingsleyae
ENSHBUG00000009634-10085.400ENSPKIG00000004295puf60a10090.476Paramormyrops_kingsleyae
ENSHBUG00000009634-9981.404ENSPSIG00000004679PUF609981.784Pelodiscus_sinensis
ENSHBUG00000009634-10081.275ENSPMGG00000013444puf60b10082.115Periophthalmus_magnuspinnatus
ENSHBUG00000009634-10082.937ENSPEMG00000008820Puf609381.973Peromyscus_maniculatus_bairdii
ENSHBUG00000009634-10082.738ENSPCIG00000020270PUF609882.534Phascolarctos_cinereus
ENSHBUG00000009634-10088.168ENSPFOG00000011118-10087.977Poecilia_formosa
ENSHBUG00000009634-10083.300ENSPFOG00000019217puf60b9883.702Poecilia_formosa
ENSHBUG00000009634-10083.300ENSPLAG00000010754puf60b10083.702Poecilia_latipinna
ENSHBUG00000009634-10087.977ENSPLAG00000017025-9287.786Poecilia_latipinna
ENSHBUG00000009634-10083.300ENSPMEG00000000838puf60b10083.702Poecilia_mexicana
ENSHBUG00000009634-10088.550ENSPMEG00000009767-9288.359Poecilia_mexicana
ENSHBUG00000009634-10081.690ENSPREG00000005440puf60b10082.093Poecilia_reticulata
ENSHBUG00000009634-7980.048ENSPPYG00000018951-9580.523Pongo_abelii
ENSHBUG00000009634-7981.517ENSPCAG00000014837PUF6010081.991Procavia_capensis
ENSHBUG00000009634-10082.540ENSPCOG00000027981PUF609981.474Propithecus_coquereli
ENSHBUG00000009634-9891.139ENSPVAG00000016167PUF608191.139Pteropus_vampyrus
ENSHBUG00000009634-9883.658ENSPNYG00000002556puf60b10083.658Pundamilia_nyererei
ENSHBUG00000009634-10099.808ENSPNYG00000004273-10099.808Pundamilia_nyererei
ENSHBUG00000009634-10084.538ENSPNAG00000019909puf60a9985.341Pygocentrus_nattereri
ENSHBUG00000009634-10079.000ENSPNAG00000019415puf60b8978.270Pygocentrus_nattereri
ENSHBUG00000009634-10083.135ENSRNOG00000009960Puf609382.163Rattus_norvegicus
ENSHBUG00000009634-10082.540ENSRBIG00000035274PUF609981.203Rhinopithecus_bieti
ENSHBUG00000009634-10082.540ENSRROG00000029360PUF609981.594Rhinopithecus_roxellana
ENSHBUG00000009634-10081.548ENSSBOG00000027089PUF609979.737Saimiri_boliviensis_boliviensis
ENSHBUG00000009634-8881.953ENSSHAG00000006668PUF608981.953Sarcophilus_harrisii
ENSHBUG00000009634-10079.134ENSSFOG00015019619puf60b9982.222Scleropages_formosus
ENSHBUG00000009634-10079.566ENSSFOG00015019371puf60a9885.540Scleropages_formosus
ENSHBUG00000009634-7489.273ENSSMAG00000016381puf60b7888.889Scophthalmus_maximus
ENSHBUG00000009634-10081.377ENSSDUG00000009935puf60b9982.377Seriola_dumerili
ENSHBUG00000009634-9795.257ENSSDUG00000007048-9795.059Seriola_dumerili
ENSHBUG00000009634-10091.194ENSSLDG00000007366-10091.797Seriola_lalandi_dorsalis
ENSHBUG00000009634-9982.197ENSSLDG00000024011puf60b10081.439Seriola_lalandi_dorsalis
ENSHBUG00000009634-6477.273ENSSPUG00000013518PUF609277.273Sphenodon_punctatus
ENSHBUG00000009634-10081.213ENSSPAG00000012144puf60b10081.629Stegastes_partitus
ENSHBUG00000009634-9893.725ENSSPAG00000020285-10093.725Stegastes_partitus
ENSHBUG00000009634-10082.540ENSSSCG00000038800PUF609782.540Sus_scrofa
ENSHBUG00000009634-9980.798ENSTGUG00000012797-10080.344Taeniopygia_guttata
ENSHBUG00000009634-10089.431ENSTRUG00000008843-10088.821Takifugu_rubripes
ENSHBUG00000009634-9983.654ENSTRUG00000005420puf60b10081.629Takifugu_rubripes
ENSHBUG00000009634-9985.243ENSTNIG00000003069-9985.437Tetraodon_nigroviridis
ENSHBUG00000009634-9983.462ENSTNIG00000013675puf60b9983.462Tetraodon_nigroviridis
ENSHBUG00000009634-7666.952ENSTBEG00000001899-10067.521Tupaia_belangeri
ENSHBUG00000009634-5982.450ENSTBEG00000002751-9982.450Tupaia_belangeri
ENSHBUG00000009634-9880.577ENSTTRG00000017088PUF6010081.958Tursiops_truncatus
ENSHBUG00000009634-10082.738ENSUAMG00000024917PUF609981.203Ursus_americanus
ENSHBUG00000009634-9977.230ENSUMAG00000000272PUF609376.850Ursus_maritimus
ENSHBUG00000009634-10082.738ENSVVUG00000022527PUF6010082.534Vulpes_vulpes
ENSHBUG00000009634-10081.151ENSXETG00000012469puf609881.151Xenopus_tropicalis
ENSHBUG00000009634-10083.300ENSXCOG00000012355puf60b10083.702Xiphophorus_couchianus
ENSHBUG00000009634-10083.300ENSXMAG00000001862puf60b10083.463Xiphophorus_maculatus
ENSHBUG00000009634-10087.247ENSXMAG00000010507-9886.842Xiphophorus_maculatus

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