EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000009730 (Gene tree)
Gene ID: 102295888
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: la-related protein 1B-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 27499 bases
Position: chrJH425430.1:1632484-1659982
Accession: 102295888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000008231	La	PF05383.17	4.4e-21	1	1
ENSHBUP00000008247	La	PF05383.17	4.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000002300	-	7511	XM_014335957	ENSHBUP00000008231	1029 (aa)	XP_014191443	-
ENSHBUT00000002281	-	7685	XM_005929676	ENSHBUP00000008247	1087 (aa)	XP_005929738	-

Gene Model

Click here to download ENSHBUG00000009730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000009730's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000009730	larp1b	92	53.081	ENSHBUG00000020762	larp1	92	58.509

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000009730	larp1b	87	55.522	ENSG00000138709	LARP1B	96	56.318	Homo_sapiens
ENSHBUG00000009730	larp1b	100	82.655	ENSAPOG00000020101	larp1b	100	82.752	Acanthochromis_polyacanthus
ENSHBUG00000009730	larp1b	53	52.595	ENSAMEG00000002748	LARP1B	99	52.249	Ailuropoda_melanoleuca
ENSHBUG00000009730	larp1b	100	88.428	ENSACIG00000023890	larp1b	100	88.428	Amphilophus_citrinellus
ENSHBUG00000009730	larp1b	90	77.790	ENSAOCG00000014268	larp1b	99	78.004	Amphiprion_ocellaris
ENSHBUG00000009730	larp1b	100	82.882	ENSAPEG00000004126	larp1b	100	82.689	Amphiprion_percula
ENSHBUG00000009730	larp1b	100	83.486	ENSATEG00000017849	larp1b	100	83.119	Anabas_testudineus
ENSHBUG00000009730	larp1b	82	55.161	ENSAPLG00000010129	LARP1B	99	54.682	Anas_platyrhynchos
ENSHBUG00000009730	larp1b	83	55.879	ENSACAG00000011338	LARP1B	93	56.963	Anolis_carolinensis
ENSHBUG00000009730	larp1b	61	53.495	ENSANAG00000034618	LARP1B	83	53.352	Aotus_nancymaae
ENSHBUG00000009730	larp1b	100	99.173	ENSACLG00000011948	larp1b	100	99.173	Astatotilapia_calliptera
ENSHBUG00000009730	larp1b	91	58.938	ENSAMXG00000006805	larp1b	86	62.270	Astyanax_mexicanus
ENSHBUG00000009730	larp1b	86	56.095	ENSBTAG00000012135	LARP1B	95	51.311	Bos_taurus
ENSHBUG00000009730	larp1b	83	55.603	ENSCJAG00000003338	LARP1B	99	57.241	Callithrix_jacchus
ENSHBUG00000009730	larp1b	82	59.555	ENSCAFG00000003831	LARP1B	100	59.555	Canis_familiaris
ENSHBUG00000009730	larp1b	85	55.916	ENSCAFG00020018899	LARP1B	95	57.599	Canis_lupus_dingo
ENSHBUG00000009730	larp1b	85	54.479	ENSCHIG00000023144	LARP1B	95	56.517	Capra_hircus
ENSHBUG00000009730	larp1b	83	55.355	ENSCCAG00000021948	LARP1B	97	56.318	Cebus_capucinus
ENSHBUG00000009730	larp1b	82	55.663	ENSCATG00000013541	LARP1B	96	55.725	Cercocebus_atys
ENSHBUG00000009730	larp1b	82	56.882	ENSCSAG00000003582	LARP1B	97	56.957	Chlorocebus_sabaeus
ENSHBUG00000009730	larp1b	81	52.845	ENSCHOG00000005354	LARP1B	96	53.097	Choloepus_hoffmanni
ENSHBUG00000009730	larp1b	90	54.518	ENSCPBG00000017480	LARP1B	89	55.578	Chrysemys_picta_bellii
ENSHBUG00000009730	larp1b	81	56.805	ENSCANG00000026958	LARP1B	96	56.883	Colobus_angolensis_palliatus
ENSHBUG00000009730	larp1b	100	74.842	ENSCSEG00000013519	larp1b	100	74.932	Cynoglossus_semilaevis
ENSHBUG00000009730	larp1b	100	81.187	ENSCVAG00000005046	larp1b	100	77.036	Cyprinodon_variegatus
ENSHBUG00000009730	larp1b	93	64.837	ENSDARG00000061169	larp1b	86	66.490	Danio_rerio
ENSHBUG00000009730	larp1b	74	53.237	ENSETEG00000012497	LARP1B	85	54.260	Echinops_telfairi
ENSHBUG00000009730	larp1b	87	46.467	ENSEBUG00000003668	larp1b	95	45.355	Eptatretus_burgeri
ENSHBUG00000009730	larp1b	84	55.335	ENSEASG00005018106	LARP1B	99	55.791	Equus_asinus_asinus
ENSHBUG00000009730	larp1b	89	54.900	ENSECAG00000001088	LARP1B	84	56.166	Equus_caballus
ENSHBUG00000009730	larp1b	76	64.390	ENSELUG00000023774	larp1b	99	59.171	Esox_lucius
ENSHBUG00000009730	larp1b	84	53.870	ENSFALG00000008098	LARP1B	96	54.486	Ficedula_albicollis
ENSHBUG00000009730	larp1b	100	80.116	ENSFHEG00000010264	larp1b	97	79.633	Fundulus_heteroclitus
ENSHBUG00000009730	larp1b	88	69.408	ENSGMOG00000005207	larp1b	85	75.277	Gadus_morhua
ENSHBUG00000009730	larp1b	86	54.723	ENSGALG00000010207	LARP1B	91	54.499	Gallus_gallus
ENSHBUG00000009730	larp1b	90	80.053	ENSGAFG00000012012	larp1b	100	79.841	Gambusia_affinis
ENSHBUG00000009730	larp1b	100	68.844	ENSGACG00000004609	larp1b	100	69.965	Gasterosteus_aculeatus
ENSHBUG00000009730	larp1b	90	54.427	ENSGAGG00000017209	LARP1B	89	56.090	Gopherus_agassizii
ENSHBUG00000009730	larp1b	82	56.620	ENSGGOG00000015900	LARP1B	96	56.209	Gorilla_gorilla
ENSHBUG00000009730	larp1b	65	81.037	ENSHCOG00000000918	larp1b	95	81.045	Hippocampus_comes
ENSHBUG00000009730	larp1b	94	62.915	ENSIPUG00000012138	larp1b	87	64.468	Ictalurus_punctatus
ENSHBUG00000009730	larp1b	99	75.996	ENSKMAG00000011589	larp1b	100	74.733	Kryptolebias_marmoratus
ENSHBUG00000009730	larp1b	100	80.598	ENSLBEG00000005655	larp1b	100	80.598	Labrus_bergylta
ENSHBUG00000009730	larp1b	93	57.996	ENSLACG00000015247	LARP1B	89	59.540	Latimeria_chalumnae
ENSHBUG00000009730	larp1b	88	64.425	ENSLOCG00000010684	larp1b	99	57.632	Lepisosteus_oculatus
ENSHBUG00000009730	larp1b	82	56.526	ENSMFAG00000002218	LARP1B	96	56.598	Macaca_fascicularis
ENSHBUG00000009730	larp1b	82	56.526	ENSMMUG00000021347	LARP1B	96	56.598	Macaca_mulatta
ENSHBUG00000009730	larp1b	75	60.455	ENSMNEG00000030406	LARP1B	96	60.462	Macaca_nemestrina
ENSHBUG00000009730	larp1b	81	56.347	ENSMLEG00000009306	LARP1B	96	56.419	Mandrillus_leucophaeus
ENSHBUG00000009730	larp1b	99	82.943	ENSMAMG00000000081	larp1b	99	82.651	Mastacembelus_armatus
ENSHBUG00000009730	larp1b	76	96.282	ENSMZEG00005002545	larp1b	100	96.282	Maylandia_zebra
ENSHBUG00000009730	larp1b	79	56.383	ENSMGAG00000004809	LARP1B	99	51.016	Meleagris_gallopavo
ENSHBUG00000009730	larp1b	82	58.188	ENSMICG00000036111	LARP1B	96	58.057	Microcebus_murinus
ENSHBUG00000009730	larp1b	90	54.278	ENSMODG00000012300	LARP1B	89	54.381	Monodelphis_domestica
ENSHBUG00000009730	larp1b	100	82.136	ENSMALG00000003638	larp1b	100	81.942	Monopterus_albus
ENSHBUG00000009730	larp1b	87	56.090	ENSMPUG00000017365	LARP1B	85	55.804	Mustela_putorius_furo
ENSHBUG00000009730	larp1b	83	54.764	ENSMLUG00000010229	LARP1B	99	54.669	Myotis_lucifugus
ENSHBUG00000009730	larp1b	93	99.390	ENSNBRG00000023846	larp1b	100	99.390	Neolamprologus_brichardi
ENSHBUG00000009730	larp1b	82	56.344	ENSNLEG00000013819	LARP1B	97	56.148	Nomascus_leucogenys
ENSHBUG00000009730	larp1b	63	59.118	ENSMEUG00000010308	LARP1B	85	59.314	Notamacropus_eugenii
ENSHBUG00000009730	larp1b	75	51.051	ENSOPRG00000005478	LARP1B	88	51.211	Ochotona_princeps
ENSHBUG00000009730	larp1b	87	92.740	ENSONIG00000012386	larp1b	99	92.323	Oreochromis_niloticus
ENSHBUG00000009730	larp1b	85	53.983	ENSOCUG00000013330	LARP1B	95	55.740	Oryctolagus_cuniculus
ENSHBUG00000009730	larp1b	97	77.137	ENSORLG00000017954	larp1b	100	76.062	Oryzias_latipes
ENSHBUG00000009730	larp1b	100	75.137	ENSORLG00020013081	larp1b	100	74.863	Oryzias_latipes_hni
ENSHBUG00000009730	larp1b	100	76.255	ENSORLG00015009580	larp1b	100	75.965	Oryzias_latipes_hsok
ENSHBUG00000009730	larp1b	100	78.585	ENSOMEG00000004210	larp1b	100	78.779	Oryzias_melastigma
ENSHBUG00000009730	larp1b	82	57.503	ENSOGAG00000005771	LARP1B	100	57.849	Otolemur_garnettii
ENSHBUG00000009730	larp1b	81	56.135	ENSOARG00000015300	LARP1B	96	56.332	Ovis_aries
ENSHBUG00000009730	larp1b	82	56.835	ENSPPAG00000030439	LARP1B	96	56.427	Pan_paniscus
ENSHBUG00000009730	larp1b	82	56.620	ENSPTRG00000016437	LARP1B	96	56.474	Pan_troglodytes
ENSHBUG00000009730	larp1b	82	56.742	ENSPANG00000012488	LARP1B	96	56.816	Papio_anubis
ENSHBUG00000009730	larp1b	84	55.631	ENSPKIG00000014360	larp1b	93	54.805	Paramormyrops_kingsleyae
ENSHBUG00000009730	larp1b	86	57.216	ENSPSIG00000012885	LARP1B	99	57.113	Pelodiscus_sinensis
ENSHBUG00000009730	larp1b	76	72.716	ENSPMGG00000007207	larp1b	95	72.055	Periophthalmus_magnuspinnatus
ENSHBUG00000009730	larp1b	62	55.252	ENSPMAG00000002700	larp1b	96	48.973	Petromyzon_marinus
ENSHBUG00000009730	larp1b	86	55.840	ENSPCIG00000026516	LARP1B	93	62.640	Phascolarctos_cinereus
ENSHBUG00000009730	larp1b	63	78.179	ENSPFOG00000022837	-	99	78.324	Poecilia_formosa
ENSHBUG00000009730	larp1b	100	78.055	ENSPFOG00000019519	larp1b	100	78.145	Poecilia_formosa
ENSHBUG00000009730	larp1b	100	80.165	ENSPLAG00000007115	larp1b	100	79.982	Poecilia_latipinna
ENSHBUG00000009730	larp1b	100	80.077	ENSPMEG00000001224	larp1b	100	79.885	Poecilia_mexicana
ENSHBUG00000009730	larp1b	83	54.268	ENSPCAG00000007546	LARP1B	96	54.940	Procavia_capensis
ENSHBUG00000009730	larp1b	72	61.594	ENSPCOG00000021874	LARP1B	96	62.500	Propithecus_coquereli
ENSHBUG00000009730	larp1b	82	52.350	ENSPVAG00000005373	LARP1B	96	52.655	Pteropus_vampyrus
ENSHBUG00000009730	larp1b	76	95.076	ENSPNYG00000017357	larp1b	100	95.076	Pundamilia_nyererei
ENSHBUG00000009730	larp1b	94	61.034	ENSPNAG00000008823	larp1b	90	61.630	Pygocentrus_nattereri
ENSHBUG00000009730	larp1b	82	56.526	ENSRROG00000030771	LARP1B	96	56.598	Rhinopithecus_roxellana
ENSHBUG00000009730	larp1b	61	52.408	ENSSHAG00000014474	LARP1B	99	52.137	Sarcophilus_harrisii
ENSHBUG00000009730	larp1b	83	85.323	ENSSMAG00000006347	larp1b	97	83.074	Scophthalmus_maximus
ENSHBUG00000009730	larp1b	100	84.170	ENSSDUG00000004182	larp1b	100	84.846	Seriola_dumerili
ENSHBUG00000009730	larp1b	98	75.518	ENSSLDG00000014613	larp1b	99	78.243	Seriola_lalandi_dorsalis
ENSHBUG00000009730	larp1b	81	56.839	ENSSPUG00000011837	LARP1B	94	57.311	Sphenodon_punctatus
ENSHBUG00000009730	larp1b	100	81.835	ENSSPAG00000017772	larp1b	100	81.942	Stegastes_partitus
ENSHBUG00000009730	larp1b	90	53.824	ENSSSCG00000034280	LARP1B	98	76.667	Sus_scrofa
ENSHBUG00000009730	larp1b	78	57.506	ENSTGUG00000002098	-	94	58.603	Taeniopygia_guttata
ENSHBUG00000009730	larp1b	99	75.852	ENSTRUG00000005612	larp1b	99	75.318	Takifugu_rubripes
ENSHBUG00000009730	larp1b	90	74.567	ENSTNIG00000012398	larp1b	100	74.356	Tetraodon_nigroviridis
ENSHBUG00000009730	larp1b	66	59.930	ENSTBEG00000004177	LARP1B	76	59.091	Tupaia_belangeri
ENSHBUG00000009730	larp1b	73	57.942	ENSTTRG00000012984	LARP1B	88	56.590	Tursiops_truncatus
ENSHBUG00000009730	larp1b	85	56.034	ENSUMAG00000007373	LARP1B	95	57.506	Ursus_maritimus
ENSHBUG00000009730	larp1b	82	47.779	ENSVPAG00000007223	LARP1B	91	72.050	Vicugna_pacos
ENSHBUG00000009730	larp1b	85	56.146	ENSVVUG00000011307	LARP1B	99	56.637	Vulpes_vulpes
ENSHBUG00000009730	larp1b	89	51.170	ENSXETG00000022512	larp1b	93	51.496	Xenopus_tropicalis
ENSHBUG00000009730	larp1b	91	73.831	ENSXCOG00000004435	larp1b	99	73.325	Xiphophorus_couchianus
ENSHBUG00000009730	larp1b	100	79.690	ENSXMAG00000008150	larp1b	100	79.508	Xiphophorus_maculatus