EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000009823 (Gene tree)
Gene ID: 102305716
Gene Symbol: usb1
Alias: zgc:91896
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 16278 bases
Position: chrJH425499.1:1133717-1149994
Accession: 102305716
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000026976	HVSL	PF09749.9	3.4e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000002122	-	1112	XM_005935036	ENSHBUP00000026976	280 (aa)	XP_005935098	UPI0003BC9260

Gene Model

Click here to download ENSHBUG00000009823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000009823's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000009823	usb1	81	54.185	ENSG00000103005	USB1	100	54.673	Homo_sapiens
ENSHBUG00000009823	usb1	100	75.177	ENSAPOG00000011942	usb1	100	73.571	Acanthochromis_polyacanthus
ENSHBUG00000009823	usb1	99	50.179	ENSAMEG00000017205	USB1	84	54.626	Ailuropoda_melanoleuca
ENSHBUG00000009823	usb1	84	83.544	ENSACIG00000012234	usb1	87	83.544	Amphilophus_citrinellus
ENSHBUG00000009823	usb1	99	78.799	ENSAOCG00000014831	usb1	99	76.512	Amphiprion_ocellaris
ENSHBUG00000009823	usb1	99	78.092	ENSAPEG00000000296	usb1	99	75.801	Amphiprion_percula
ENSHBUG00000009823	usb1	99	77.305	ENSATEG00000009348	usb1	99	77.305	Anabas_testudineus
ENSHBUG00000009823	usb1	79	56.000	ENSAPLG00000002756	USB1	99	56.000	Anas_platyrhynchos
ENSHBUG00000009823	usb1	80	51.304	ENSACAG00000015481	USB1	99	51.304	Anolis_carolinensis
ENSHBUG00000009823	usb1	81	52.863	ENSANAG00000035640	USB1	94	50.201	Aotus_nancymaae
ENSHBUG00000009823	usb1	100	97.865	ENSACLG00000020586	usb1	100	97.865	Astatotilapia_calliptera
ENSHBUG00000009823	usb1	99	54.167	ENSAMXG00000040146	usb1	83	57.371	Astyanax_mexicanus
ENSHBUG00000009823	usb1	99	48.929	ENSBTAG00000015758	USB1	92	51.639	Bos_taurus
ENSHBUG00000009823	usb1	81	53.744	ENSCJAG00000011733	USB1	94	51.004	Callithrix_jacchus
ENSHBUG00000009823	usb1	99	49.462	ENSCAFG00000008556	USB1	62	52.155	Canis_familiaris
ENSHBUG00000009823	usb1	99	47.842	ENSCAFG00020009263	USB1	85	53.540	Canis_lupus_dingo
ENSHBUG00000009823	usb1	99	49.286	ENSCHIG00000024290	USB1	92	52.263	Capra_hircus
ENSHBUG00000009823	usb1	99	48.746	ENSTSYG00000006997	USB1	86	52.863	Carlito_syrichta
ENSHBUG00000009823	usb1	80	44.196	ENSCAPG00000009057	USB1	96	44.196	Cavia_aperea
ENSHBUG00000009823	usb1	99	48.029	ENSCPOG00000014325	USB1	83	54.464	Cavia_porcellus
ENSHBUG00000009823	usb1	81	53.304	ENSCCAG00000022132	USB1	94	50.602	Cebus_capucinus
ENSHBUG00000009823	usb1	81	53.744	ENSCATG00000032174	USB1	94	51.004	Cercocebus_atys
ENSHBUG00000009823	usb1	61	54.335	ENSCLAG00000007363	USB1	98	54.335	Chinchilla_lanigera
ENSHBUG00000009823	usb1	81	53.744	ENSCSAG00000004783	USB1	94	51.004	Chlorocebus_sabaeus
ENSHBUG00000009823	usb1	80	54.867	ENSCPBG00000026943	USB1	90	51.394	Chrysemys_picta_bellii
ENSHBUG00000009823	usb1	80	30.043	ENSCSAVG00000000894	-	84	30.043	Ciona_savignyi
ENSHBUG00000009823	usb1	80	53.097	ENSCANG00000037135	USB1	94	51.004	Colobus_angolensis_palliatus
ENSHBUG00000009823	usb1	99	49.821	ENSCGRG00001011243	USB1	91	51.852	Cricetulus_griseus_chok1gshd
ENSHBUG00000009823	usb1	99	49.821	ENSCGRG00000013252	USB1	91	51.852	Cricetulus_griseus_crigri
ENSHBUG00000009823	usb1	99	65.125	ENSCSEG00000013881	usb1	88	69.835	Cynoglossus_semilaevis
ENSHBUG00000009823	usb1	80	69.604	ENSCVAG00000009252	usb1	97	69.604	Cyprinodon_variegatus
ENSHBUG00000009823	usb1	86	60.905	ENSDARG00000003841	usb1	87	60.905	Danio_rerio
ENSHBUG00000009823	usb1	84	51.695	ENSDORG00000001888	Usb1	89	51.695	Dipodomys_ordii
ENSHBUG00000009823	usb1	75	40.278	FBgn0037713	CG16790	81	40.278	Drosophila_melanogaster
ENSHBUG00000009823	usb1	99	41.343	ENSETEG00000019682	USB1	94	43.028	Echinops_telfairi
ENSHBUG00000009823	usb1	94	40.426	ENSEBUG00000005889	usb1	89	42.745	Eptatretus_burgeri
ENSHBUG00000009823	usb1	99	48.746	ENSEASG00005005484	USB1	86	53.744	Equus_asinus_asinus
ENSHBUG00000009823	usb1	99	48.561	ENSECAG00000019493	USB1	78	53.540	Equus_caballus
ENSHBUG00000009823	usb1	61	50.289	ENSEEUG00000000154	USB1	65	50.289	Erinaceus_europaeus
ENSHBUG00000009823	usb1	89	65.079	ENSELUG00000010974	usb1	92	65.079	Esox_lucius
ENSHBUG00000009823	usb1	83	52.137	ENSFCAG00000002693	USB1	88	52.137	Felis_catus
ENSHBUG00000009823	usb1	82	51.739	ENSFALG00000006876	USB1	95	48.235	Ficedula_albicollis
ENSHBUG00000009823	usb1	99	48.746	ENSFDAG00000010052	USB1	87	53.680	Fukomys_damarensis
ENSHBUG00000009823	usb1	88	63.745	ENSFHEG00000012334	usb1	88	66.818	Fundulus_heteroclitus
ENSHBUG00000009823	usb1	80	72.646	ENSGMOG00000004228	usb1	100	72.646	Gadus_morhua
ENSHBUG00000009823	usb1	79	55.157	ENSGALG00000035604	USB1	88	55.357	Gallus_gallus
ENSHBUG00000009823	usb1	100	70.070	ENSGAFG00000021890	usb1	94	70.498	Gambusia_affinis
ENSHBUG00000009823	usb1	88	74.800	ENSGACG00000003257	usb1	90	74.800	Gasterosteus_aculeatus
ENSHBUG00000009823	usb1	99	50.538	ENSGAGG00000022572	USB1	90	52.033	Gopherus_agassizii
ENSHBUG00000009823	usb1	81	54.185	ENSGGOG00000017147	USB1	94	51.406	Gorilla_gorilla
ENSHBUG00000009823	usb1	99	48.921	ENSHGLG00000016078	USB1	83	53.540	Heterocephalus_glaber_female
ENSHBUG00000009823	usb1	99	48.921	ENSHGLG00100005562	USB1	83	53.540	Heterocephalus_glaber_male
ENSHBUG00000009823	usb1	78	73.516	ENSHCOG00000015633	usb1	87	74.107	Hippocampus_comes
ENSHBUG00000009823	usb1	99	54.671	ENSIPUG00000008601	usb1	78	63.111	Ictalurus_punctatus
ENSHBUG00000009823	usb1	99	49.117	ENSSTOG00000007548	USB1	83	53.744	Ictidomys_tridecemlineatus
ENSHBUG00000009823	usb1	99	49.821	ENSJJAG00000021859	Usb1	85	54.185	Jaculus_jaculus
ENSHBUG00000009823	usb1	99	71.071	ENSKMAG00000007200	usb1	99	71.071	Kryptolebias_marmoratus
ENSHBUG00000009823	usb1	91	69.650	ENSLBEG00000008452	usb1	79	70.916	Labrus_bergylta
ENSHBUG00000009823	usb1	84	48.739	ENSLACG00000000105	USB1	68	55.612	Latimeria_chalumnae
ENSHBUG00000009823	usb1	99	53.004	ENSLOCG00000000465	usb1	90	54.331	Lepisosteus_oculatus
ENSHBUG00000009823	usb1	99	40.210	ENSLAFG00000002267	USB1	83	43.723	Loxodonta_africana
ENSHBUG00000009823	usb1	81	53.744	ENSMFAG00000003926	USB1	94	51.004	Macaca_fascicularis
ENSHBUG00000009823	usb1	81	53.744	ENSMMUG00000022669	USB1	94	51.004	Macaca_mulatta
ENSHBUG00000009823	usb1	81	53.304	ENSMNEG00000042487	USB1	94	50.602	Macaca_nemestrina
ENSHBUG00000009823	usb1	81	53.744	ENSMLEG00000028756	USB1	94	51.004	Mandrillus_leucophaeus
ENSHBUG00000009823	usb1	99	73.118	ENSMAMG00000015092	usb1	99	71.326	Mastacembelus_armatus
ENSHBUG00000009823	usb1	100	98.214	ENSMZEG00005010008	usb1	100	98.214	Maylandia_zebra
ENSHBUG00000009823	usb1	99	49.462	ENSMAUG00000007832	Usb1	85	54.185	Mesocricetus_auratus
ENSHBUG00000009823	usb1	81	53.744	ENSMICG00000004900	USB1	86	53.744	Microcebus_murinus
ENSHBUG00000009823	usb1	99	51.254	ENSMOCG00000022647	Usb1	85	55.066	Microtus_ochrogaster
ENSHBUG00000009823	usb1	80	75.893	ENSMMOG00000000490	usb1	87	75.893	Mola_mola
ENSHBUG00000009823	usb1	87	48.606	ENSMODG00000014067	USB1	94	48.606	Monodelphis_domestica
ENSHBUG00000009823	usb1	100	75.265	ENSMALG00000005930	usb1	100	75.265	Monopterus_albus
ENSHBUG00000009823	usb1	99	48.746	MGP_CAROLIEiJ_G0031421	Usb1	99	50.000	Mus_caroli
ENSHBUG00000009823	usb1	99	49.104	ENSMUSG00000031792	Usb1	99	50.000	Mus_musculus
ENSHBUG00000009823	usb1	81	55.066	MGP_PahariEiJ_G0023019	Usb1	100	52.137	Mus_pahari
ENSHBUG00000009823	usb1	99	49.104	MGP_SPRETEiJ_G0032540	Usb1	85	55.066	Mus_spretus
ENSHBUG00000009823	usb1	99	48.746	ENSMPUG00000004684	USB1	83	51.931	Mustela_putorius_furo
ENSHBUG00000009823	usb1	81	54.626	ENSMLUG00000007400	USB1	98	54.626	Myotis_lucifugus
ENSHBUG00000009823	usb1	99	51.254	ENSNGAG00000009703	Usb1	90	53.112	Nannospalax_galili
ENSHBUG00000009823	usb1	100	89.643	ENSNBRG00000008747	usb1	100	92.523	Neolamprologus_brichardi
ENSHBUG00000009823	usb1	75	54.245	ENSNLEG00000003340	USB1	92	52.174	Nomascus_leucogenys
ENSHBUG00000009823	usb1	99	49.640	ENSODEG00000016214	USB1	90	53.333	Octodon_degus
ENSHBUG00000009823	usb1	99	96.416	ENSONIG00000011063	usb1	100	96.416	Oreochromis_niloticus
ENSHBUG00000009823	usb1	80	53.778	ENSOANG00000012118	USB1	94	53.778	Ornithorhynchus_anatinus
ENSHBUG00000009823	usb1	91	71.984	ENSORLG00000012479	usb1	95	71.429	Oryzias_latipes
ENSHBUG00000009823	usb1	88	73.171	ENSORLG00020018671	usb1	96	70.656	Oryzias_latipes_hni
ENSHBUG00000009823	usb1	91	71.984	ENSORLG00015009679	usb1	96	71.429	Oryzias_latipes_hsok
ENSHBUG00000009823	usb1	100	71.071	ENSOMEG00000012930	usb1	100	71.071	Oryzias_melastigma
ENSHBUG00000009823	usb1	81	50.220	ENSOGAG00000003273	USB1	94	47.390	Otolemur_garnettii
ENSHBUG00000009823	usb1	84	51.852	ENSOARG00000001107	USB1	93	51.852	Ovis_aries
ENSHBUG00000009823	usb1	81	53.744	ENSPPAG00000042137	USB1	94	51.004	Pan_paniscus
ENSHBUG00000009823	usb1	83	51.709	ENSPPRG00000024797	USB1	88	51.709	Panthera_pardus
ENSHBUG00000009823	usb1	83	51.282	ENSPTIG00000007506	USB1	88	51.282	Panthera_tigris_altaica
ENSHBUG00000009823	usb1	81	50.661	ENSPTRG00000008172	USB1	100	54.673	Pan_troglodytes
ENSHBUG00000009823	usb1	81	53.744	ENSPANG00000025138	USB1	94	51.004	Papio_anubis
ENSHBUG00000009823	usb1	99	56.229	ENSPKIG00000015109	usb1	83	59.919	Paramormyrops_kingsleyae
ENSHBUG00000009823	usb1	80	44.395	ENSPSIG00000004305	USB1	100	44.395	Pelodiscus_sinensis
ENSHBUG00000009823	usb1	79	68.468	ENSPMGG00000017725	usb1	85	68.468	Periophthalmus_magnuspinnatus
ENSHBUG00000009823	usb1	99	50.178	ENSPEMG00000016183	Usb1	89	51.852	Peromyscus_maniculatus_bairdii
ENSHBUG00000009823	usb1	79	48.889	ENSPMAG00000000462	usb1	95	48.673	Petromyzon_marinus
ENSHBUG00000009823	usb1	100	70.070	ENSPFOG00000011130	usb1	91	71.937	Poecilia_formosa
ENSHBUG00000009823	usb1	100	70.070	ENSPLAG00000009820	usb1	91	71.937	Poecilia_latipinna
ENSHBUG00000009823	usb1	100	70.423	ENSPMEG00000006402	usb1	91	72.332	Poecilia_mexicana
ENSHBUG00000009823	usb1	88	68.924	ENSPREG00000001047	usb1	89	72.273	Poecilia_reticulata
ENSHBUG00000009823	usb1	76	50.935	ENSPPYG00000007401	USB1	94	48.305	Pongo_abelii
ENSHBUG00000009823	usb1	81	53.304	ENSPCOG00000022612	USB1	86	53.304	Propithecus_coquereli
ENSHBUG00000009823	usb1	99	47.312	ENSPVAG00000004613	USB1	92	50.420	Pteropus_vampyrus
ENSHBUG00000009823	usb1	100	98.929	ENSPNYG00000022262	usb1	100	98.929	Pundamilia_nyererei
ENSHBUG00000009823	usb1	93	56.489	ENSPNAG00000011736	usb1	83	58.776	Pygocentrus_nattereri
ENSHBUG00000009823	usb1	99	49.104	ENSRNOG00000013216	Usb1	85	55.066	Rattus_norvegicus
ENSHBUG00000009823	usb1	81	50.661	ENSRBIG00000044466	USB1	100	54.206	Rhinopithecus_bieti
ENSHBUG00000009823	usb1	81	53.744	ENSRROG00000029211	USB1	94	51.004	Rhinopithecus_roxellana
ENSHBUG00000009823	usb1	81	53.744	ENSSBOG00000029362	USB1	94	50.996	Saimiri_boliviensis_boliviensis
ENSHBUG00000009823	usb1	77	51.152	ENSSHAG00000006993	USB1	90	51.542	Sarcophilus_harrisii
ENSHBUG00000009823	usb1	99	58.076	ENSSFOG00015023663	usb1	80	60.311	Scleropages_formosus
ENSHBUG00000009823	usb1	100	69.257	ENSSMAG00000015834	usb1	100	69.257	Scophthalmus_maximus
ENSHBUG00000009823	usb1	80	80.357	ENSSDUG00000002949	usb1	83	80.357	Seriola_dumerili
ENSHBUG00000009823	usb1	100	75.972	ENSSLDG00000014174	usb1	100	75.972	Seriola_lalandi_dorsalis
ENSHBUG00000009823	usb1	76	52.336	ENSSPUG00000006741	USB1	100	52.336	Sphenodon_punctatus
ENSHBUG00000009823	usb1	99	75.789	ENSSPAG00000007484	usb1	99	74.386	Stegastes_partitus
ENSHBUG00000009823	usb1	85	52.049	ENSSSCG00000002807	USB1	91	52.049	Sus_scrofa
ENSHBUG00000009823	usb1	75	53.081	ENSTGUG00000004792	USB1	87	52.252	Taeniopygia_guttata
ENSHBUG00000009823	usb1	99	68.459	ENSTRUG00000021069	usb1	92	72.581	Takifugu_rubripes
ENSHBUG00000009823	usb1	99	57.348	ENSTNIG00000000626	usb1	83	65.919	Tetraodon_nigroviridis
ENSHBUG00000009823	usb1	80	38.839	ENSTBEG00000001507	USB1	97	38.839	Tupaia_belangeri
ENSHBUG00000009823	usb1	99	50.179	ENSUAMG00000016823	USB1	84	54.626	Ursus_americanus
ENSHBUG00000009823	usb1	76	54.673	ENSUMAG00000021369	USB1	100	54.673	Ursus_maritimus
ENSHBUG00000009823	usb1	99	48.561	ENSVVUG00000023700	USB1	87	53.540	Vulpes_vulpes
ENSHBUG00000009823	usb1	77	54.839	ENSXETG00000013795	usb1	89	54.709	Xenopus_tropicalis
ENSHBUG00000009823	usb1	89	72.727	ENSXMAG00000024687	usb1	75	72.727	Xiphophorus_maculatus